Esal022375.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- -
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010014206.1:22628-29825[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.019 2.1 9.6 0.0 1 23 33 55 33 55 0.93 2 35 3e-07 3.3e-05 24.7 1.5 1 23 61 83 61 83 0.98 3 35 0.0015 0.17 13.0 3.0 2 23 90 111 90 112 0.95 4 35 7.6e-05 0.0084 17.1 1.0 1 23 117 139 117 139 0.98 5 35 0.00049 0.054 14.6 2.1 1 23 145 167 145 167 0.97 6 35 0.00022 0.024 15.7 5.4 1 23 178 200 178 200 0.97 7 35 1.7e-06 0.00018 22.3 1.7 1 23 209 231 209 231 0.98 8 35 3.9e-05 0.0043 18.0 1.7 1 23 237 259 237 259 0.98 9 35 7.5e-06 0.00083 20.3 3.9 1 23 265 287 265 287 0.97 10 35 8.8e-07 9.8e-05 23.2 2.5 1 23 293 315 293 315 0.98 11 35 0.012 1.3 10.2 0.5 2 23 398 419 398 419 0.97 12 35 0.015 1.6 9.9 5.1 1 23 429 452 429 452 0.93 13 35 0.0004 0.044 14.8 2.2 1 23 457 480 457 480 0.97 14 35 0.00074 0.082 14.0 0.3 1 23 488 510 488 510 0.98 15 35 0.0032 0.35 12.0 1.8 2 23 517 538 516 538 0.96 16 35 0.00015 0.017 16.1 0.3 2 23 545 566 544 566 0.97 17 35 0.0027 0.3 12.2 0.7 1 23 572 594 572 594 0.95 18 35 6.7 7.5e+02 1.5 0.2 1 7 603 609 603 611 0.92 19 35 2.8e-05 0.0031 18.5 1.4 2 23 657 678 656 678 0.96 20 35 0.00069 0.077 14.1 2.2 1 23 682 704 682 704 0.98 21 35 0.00012 0.013 16.5 1.6 3 23 712 732 711 732 0.97 22 35 9.5e-05 0.011 16.8 3.3 2 23 739 760 738 760 0.96 23 35 0.21 24 6.3 0.1 2 23 798 818 797 818 0.94 24 35 3.9e-07 4.3e-05 24.3 1.1 2 23 825 846 825 846 0.97 25 35 2.6e-07 2.9e-05 24.8 1.9 1 23 852 874 852 874 0.99 26 35 5.3e-05 0.0058 17.6 2.6 1 23 970 992 970 992 0.98 27 35 0.0012 0.13 13.4 0.9 2 23 1000 1022 1000 1022 0.94 28 35 0.001 0.12 13.5 2.6 1 23 1028 1050 1028 1050 0.92 29 35 0.27 29 5.9 1.7 1 23 1054 1076 1054 1076 0.97 30 35 3.6e-05 0.004 18.1 1.1 3 23 1084 1104 1082 1104 0.97 31 35 2.1e-05 0.0023 18.8 0.1 1 23 1110 1132 1110 1132 0.98 32 35 0.066 7.3 7.9 0.9 1 23 1138 1160 1138 1160 0.95 33 35 7e-07 7.8e-05 23.5 0.2 2 23 1167 1188 1166 1188 0.97 34 35 7.7e-07 8.5e-05 23.4 1.2 1 23 1194 1216 1194 1216 0.98 35 35 2.6e-06 0.00029 21.7 2.5 1 23 1222 1244 1222 1244 0.99
Sequence Information
- Coding Sequence
- ATGTCGCAGGACTGTAGCAACGGTACTGAAATAGAGGATCAGAAAATATCGATACATGAACAGAGTTTGCACGTAGAGGAGAACCAGTCGAAGCTATACCTATGCACACTGTGCGGTGAAGGTTTTGCCTCCGAACAGGCACTCGCGGTGCATAACGAGGTACACGACGATAAGTATCCATTTTCGTGCGACGAGTGCGGAAGAAGTTTTAAGACGACGTCGACGCTGAGGAAACATCAGCTGATACATACCGGGGAGAAAACAAACGTTTGCGAAATATGCGGATACTCGAGTTTACATCGTTCAAATTTAATAAATCATCAACGACGTCATCATTTCGATTATAAATTTAGATGCGATATTTGTAGCATGGGATTTTATACGAAAAGCAATTATCAGGAACATCTAACTATACACAGTAGGGAGAAACCTTTTCAATGTCATATTTGCCAGGCTTCGTTCAGATATCGTCAGGGATTAAGGCTTCACGCGAAATTGCATCAACCCGATTATATACCGCCTCAGAAAAAACATCATTGCGAATTGTGCAACAAACGGTTCTCGAGGAAACAGGTATTGTTGGTTCACATGAAAACTCACAGCACAGGCAATGTTCAGAGCGAATTTGTATGTCACATATGCGGTAAGTCTGTATCGAGCAAGACTTATCTTACCGTTCATGTTAGAAAACATACCGGCGAAAAACCACATGTATGCGATTTGTGTAACAAGGGCTTTATATCGCAAAATTATTTAAGCGTACATAGGCGAACTCACACCGGCGAAAGACCCCACGAATGTACCCACTGCGGTAAACGATTCACACAGAGGACCACATTGGTCGTTCATCTAAGGGGTCATACGGGGGACAGACCTTATCCTTGTAACATTTGTCACAAATCTTTCGCCTCTAAGACCATGCTCAATTCACATCTTAAAACTCACGCTAAACAAAACGCTCGTGCTCAACAAGAACAGGAGAGAAACGACGGATACCGCGGCTATGAGGCCTTGGCTTTCGTACCCTTGTTCACAGTCTCGGAAGAAATTCAATCCTCGTTACCTAGTAGAAGCGGGAGTGATCGTCTTGAGGAGACCGATAATTTAGGATCGGATGACTCTTTGATCCTTGGAAAGACCCCGTTTATATCTATTGCAAAAGAAGAATTTAACAGTCTTGAATTATCTGCTCGATGTGATATTTGTAGTAAGGTATTTTTAAACGAGAGATATTTGGCGAGGCATAAAATATCTCACGATAATCAGGGCAGCGTCGTTGATCTGTATCAATGCAAGGAGTGTCAGAGAGTATTCAAAACTAGGGAGGACTGCCATAAACATCTCGATAACATTCATTCCGGTAGTCAATTCAGCTGCGATAATTGCCCCAAGGTTTTTCGGACAAAGAGAAATCGCGATATTCATCTCAAGAAGAAACATAAGATGATGATAACTTCGACTTACAACTGCGATGATTGTGGCGTAACGTTTTTTGACGTCAATCTTTATCGAGCACATCGCAAAATCCACAATGATAATCGTGTACTCAACTGCGAGTACTGCGATTTTGAAACTAAGAATAACACCAGTCTTCGGACACACAGGAAATTACATACCAATCAGTACAGTATAAGGTGCGAAGATTGTTCCAAGGGTTTTGTCTCTCAAACTGCGCTGGATAGGCATAAGATAACTCACACCGGGGAGAGACCGTTCTCTTGTAAAATTTGCTCGGCGTCCTACGCAGACAAAAGGAGCCTGCAGCTTCATTCCACCTCGCACGATCCTAATGGGAGGGAAAAAAAATATCAGTGTGAGATTTGTGGAGCTGAGAGGATATTGTTGCCTAAGTCGACAGATCCTCTGTCCATTGAAGAAAAAGGGATCATCAAGAATTTGAAAAAGAGACAAATTTCTGAAAAAACTAGTAAAATTAAACCGAAAGTTATTATTCCCTCGGAGCCTATAGAATGTCAGATATGTCGCAAGGTATTCAAGAAGAAAAAATACCTCAGAGTACACATGACCCTGCACGGAGCTCCCCACGTCTGTCACGTATGTGGCGCTAAATTAACTTCGGAGTATTATCTGAAGATACACGTCAGGAGACACAACAAGGAGTTTACAGAATTTTGCAAAGTATGTAACAAGGGGTTTTACCTTAAGTCGACGCTGAAAACTCACATGAGCGTACACACTGAGGATAAACCCTGTATTTGCCAAGTCTGCAAGAAGCGGTTTGGAAACAAAGTGTACCTGAAAACCCACATGAAAATTCACAGCAGGCCCGAAACGAGGAAAAAATTCACTTGCGATATTTGTAAATTTGAAACTTTCTACAGCTACTGTCACAAGGAACATATCCGGACGCACACAGGGGAGGGACAGGTGCCGTGCGAGGTCTGCGGAAAACTCATTCGGAGACAGTACATGAAGATTCATATCCGTATACATACTGGTGAAAAACCGGAAGTATGCGAATATTGCGGGAAAGCCTTTAGCTCTAGGAAGTATCTCGTCAAGCACAGGAGGACTCACACTGGGGAACGACCTTACCGGTGTAAAATATGTGAAAAACGATTCACACAGCGTGGAACTCTCACGGCTCACTTGAGGAGACACGACGCTGGGGACCTTGAGGCGATTGATTCGATTTTGGATGAGACTGAATACGCGGAATATACATCACAAGATACTATAGAAGAGGAGTATTGCGTAGATATCAATTCTCAAGCCGCCACTGAAGAGATTGTAGACCAGCGTGCGGAAGTGATAGAGAGTTTAGTAAATATCGTCAATAACGATTCCGACAAACAAAAACTTGAGACGGAGACGAAAAACAAGAGACCAAAACGGCGAGCTAAATACGCTGAGAGAACATCTTCTTCTTGTACCGTACAAACTTATTACCAATGCGATCTTTGCGGCAAAAGAATTAGAAATCGATCATCGTTCACCAAACACAGACAAAATCATGACAGGAAAATTCCGGTCAATCGATGCCAAGATTGCGACAAGGAATTTTCGGACGATGAAAAATTCGAGAAACACAGAGTGAAAGTTCACCAGGAGGACAGACCCTTTCCTTGCATATTGTGCGGCAAGTGTTTCAAAACTGAAGAGTTTTTAAAAACTCATCTGAAACAGCATAACAAAAAATTTACCTGCGATATTTGCGGCGTATGCAAAGTATCCGGTTACGATTTAAGGCTTCATAAGAAAAAACATAATCAAGAGTACGTCACCTTTTGTGAGATTTGTAAAAAGGGTTTTTACACAAATCAGACGCTGGAACGTCACCTGTTGACTCACACCGGTGAAAAACCGTACGTTTGTAAAATTTGCAATACTCCGTACGCAAGCGCGGCGTATTTGAATCTGCACATGAAGTCGCACGGACAGAGGGAAAAGCACAAATGTACTATATGCGATTTTGAGAGTTTTTGGAAAGCTGCGCTCAAGGTTCACATGAAAATTCACACGGGGGAGAATCAAATAACTTGCGAGATATGCGGTAAATCGGTATCCAGCAAGACCTATCTTCAGGTTCACATGAGGATACACTCCGGCGAAAAACCTCACGTCTGCGAAGTATGCGGAAAGGCTTTTAGCGTCAGAAAATATCTCACCGTTCATCAGAGAACTCACACCGGCGAACGTCCCTACGAGTGTAAATATTGTCAGAAGAGATTCACGCAACAGGGATCTATGAACTCACACATCAAATCGCACCCCGAGGCTAACAAATAA
- Protein Sequence
- MSQDCSNGTEIEDQKISIHEQSLHVEENQSKLYLCTLCGEGFASEQALAVHNEVHDDKYPFSCDECGRSFKTTSTLRKHQLIHTGEKTNVCEICGYSSLHRSNLINHQRRHHFDYKFRCDICSMGFYTKSNYQEHLTIHSREKPFQCHICQASFRYRQGLRLHAKLHQPDYIPPQKKHHCELCNKRFSRKQVLLVHMKTHSTGNVQSEFVCHICGKSVSSKTYLTVHVRKHTGEKPHVCDLCNKGFISQNYLSVHRRTHTGERPHECTHCGKRFTQRTTLVVHLRGHTGDRPYPCNICHKSFASKTMLNSHLKTHAKQNARAQQEQERNDGYRGYEALAFVPLFTVSEEIQSSLPSRSGSDRLEETDNLGSDDSLILGKTPFISIAKEEFNSLELSARCDICSKVFLNERYLARHKISHDNQGSVVDLYQCKECQRVFKTREDCHKHLDNIHSGSQFSCDNCPKVFRTKRNRDIHLKKKHKMMITSTYNCDDCGVTFFDVNLYRAHRKIHNDNRVLNCEYCDFETKNNTSLRTHRKLHTNQYSIRCEDCSKGFVSQTALDRHKITHTGERPFSCKICSASYADKRSLQLHSTSHDPNGREKKYQCEICGAERILLPKSTDPLSIEEKGIIKNLKKRQISEKTSKIKPKVIIPSEPIECQICRKVFKKKKYLRVHMTLHGAPHVCHVCGAKLTSEYYLKIHVRRHNKEFTEFCKVCNKGFYLKSTLKTHMSVHTEDKPCICQVCKKRFGNKVYLKTHMKIHSRPETRKKFTCDICKFETFYSYCHKEHIRTHTGEGQVPCEVCGKLIRRQYMKIHIRIHTGEKPEVCEYCGKAFSSRKYLVKHRRTHTGERPYRCKICEKRFTQRGTLTAHLRRHDAGDLEAIDSILDETEYAEYTSQDTIEEEYCVDINSQAATEEIVDQRAEVIESLVNIVNNDSDKQKLETETKNKRPKRRAKYAERTSSSCTVQTYYQCDLCGKRIRNRSSFTKHRQNHDRKIPVNRCQDCDKEFSDDEKFEKHRVKVHQEDRPFPCILCGKCFKTEEFLKTHLKQHNKKFTCDICGVCKVSGYDLRLHKKKHNQEYVTFCEICKKGFYTNQTLERHLLTHTGEKPYVCKICNTPYASAAYLNLHMKSHGQREKHKCTICDFESFWKAALKVHMKIHTGENQITCEICGKSVSSKTYLQVHMRIHSGEKPHVCEVCGKAFSVRKYLTVHQRTHTGERPYECKYCQKRFTQQGSMNSHIKSHPEANK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -