Esal015596.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- -
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010011726.1:1-3836[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-07 0.0002 21.6 0.0 17 41 1 25 1 28 0.91 2 2 7.5 7.1e+03 -2.6 0.0 33 45 91 103 91 103 0.85
Sequence Information
- Coding Sequence
- ATGTCTTTCAGAAAAGCTAGTATCACGTACAATATACCGAGAAGCACATTGGGCGATATTCTACAAGGCCGTGTACCTGAACATTCTCGAAAAATGGGACCTGATACTGTTTTTGAAGCTGAAGAGAAAAAACTTGTAGAATGGTGCATCACGTTGGCAAAGTGTGGCTTTCCAAGACGGAACGAAGATTTACTACCAACGGTTCATAAAATAGTTACAGATGATGGCAGAAAGACACCATTCAGAAACGGCCGTCCAGGTAAAAAGTGGCTTTCCTCATTCTTCAAACGTCATCCTGAGCTCTCTCAAAAGACGCCTGAGGGAATCAGCAAAGGACGTGCAATTATATCGGAACAAACGGATGTAAAAACATTAACAACACCCAGATGGGAAATAAAAACTTGTCTACAGGAGACAATTGAAATTGAAACGCTTTCAGCAATGCAACTTCGCTGCATGGCTAAAAGCTGGTTTGAAAACCGCCTGAAACAGTTGTGGAAAAATGATGCAAGTAGAGAAACTTTACCACCTGTGGACGTTTATCCATACGTTCGACCTCCTAGGGACGTTGTCAACAGTATGCGGCCAAGTTGGATCCTCGGCAGATTTGAAACTGGGTGGATGAATAGTGATGTATTCTATGAATACGTAGCAAACTCCTTTAATCAATGGATTGAACAAAAAGGTATTCTAAAACCCGTCCTGCTGTTCATTGGTGGTCACAAATCTCATATGACCATGCACCGTAGTGAAACTTGTGACCGCCATGGGATAATCATGTACGCTCTTCCACCAAACGCGACGCATATCATGCAGCCTGCTGACGCCCAAACGAGCACCTCTGATCATCAGCCGGATCTGCAGGATATACAGTTAGCCGAAAAAGTTATTAGAAGCATTGCACCCAGCTTAGAGGCCTCAGGAATGGATGTCAGCATGATTTTGGAAGCGATTTCGAAAGCTACGTCTTCGATTCCTTCACCTGCGGAATGTAGCAGCAGATCGCACATAAGTACTGAAACATCCGTGGTCGAAGTAGATCTGCCTGTCCTTGAAACAGCGAGTCCGGACTTTCTCGTTGATATGGGAGACATTCTTGACAGCGAGATAATGTTTCACCTCTCAAATCATGTTGCACCGTCAACTAAAATATCAGAGGCAGTTTTGCTTCCGATGAATGCTGTGTCCGAGTTGATATTGATTCCAGAATCTGGAGTAGAAAGTATTTATCTATCGAAACAGGATGAAGTTCGTAGGACGAAAACACTGCCATCTGCTCAGAACGATTCAG
- Protein Sequence
- MSFRKASITYNIPRSTLGDILQGRVPEHSRKMGPDTVFEAEEKKLVEWCITLAKCGFPRRNEDLLPTVHKIVTDDGRKTPFRNGRPGKKWLSSFFKRHPELSQKTPEGISKGRAIISEQTDVKTLTTPRWEIKTCLQETIEIETLSAMQLRCMAKSWFENRLKQLWKNDASRETLPPVDVYPYVRPPRDVVNSMRPSWILGRFETGWMNSDVFYEYVANSFNQWIEQKGILKPVLLFIGGHKSHMTMHRSETCDRHGIIMYALPPNATHIMQPADAQTSTSDHQPDLQDIQLAEKVIRSIAPSLEASGMDVSMILEAISKATSSIPSPAECSSRSHISTETSVVEVDLPVLETASPDFLVDMGDILDSEIMFHLSNHVAPSTKISEAVLLPMNAVSELILIPESGVESIYLSKQDEVRRTKTLPSAQNDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -