Basic Information

Gene Symbol
ct
Assembly
GCA_018420115.1
Location
JAFFZH010015526.1:281486-294823[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-28 7.5e-24 84.1 0.0 2 72 414 485 413 490 0.95
2 3 9.3e-33 1.3e-28 99.4 0.0 2 77 821 897 820 899 0.96
3 3 5.3e-31 7.3e-27 93.8 0.0 3 75 1048 1121 1046 1125 0.95

Sequence Information

Coding Sequence
ATGTCCACTCCGCGTTCCCCGCCTGGACCACAACTCTTCCCTTTCATGTTACCTTCCGGTCCCATCTATCATGGCTTCGTTGTTTTTACTTCTTGGATCAGTCAGCTGGGCGAAGAGGTGACGAGACTACAGCAAAGCATTCAACGGCTACAAGAGACGAATGCACAAGCCACTGCACGTTTCGAGGAAGAGTTGGAGCTACACAAGCAACACATAACCAGACTGGAAGCTAGACTCGAGAGACAAAGAGACTATGACGACCTTAAACGTGAAATAAACGTTTTGAGATCCGTGGATTTCTCACAGATCCCAACCGGCGAACCAGGGAAAAGTTTGGAACATCTTCTTCTTGAGAGGACGAAGGCTCTTCAGCAAACTGAGAGCCTCAAGCCACCTACAACGCCGGACGCACTTGGTGGCCTTGCTTCCCCCCTGCAGCGAGCCGCGACCGCCTCGCCCCACGGCGGCAACGCGCTACCCTCAGCATCCCAACCACCACCGCCGCCACCGCCACCACCACCACCGCCGCCACTACCATCCCAAACCAGATCCACTCCGACCCCGTCTTCGGCGACCTCTTCGTCATCCCTACTGTTCCATCCACCGCTCCAAAACGTGGAGACGTTCGGCTCATTCCTCGGTGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCTATCATGAGTCAGCAGCATCCCCAAGTCTCGCAAAGCCAGCCTCAGCTGTTGCACGGGCCCTCGTTAAACCATCTTCCGTCACCGACAGATTCTACGAACACGCCGGCAAAGTCAAACACGCCCCTTGGTTGCGGTATGGATGCTTCGGAAAAAGCACCGACGCCAATTCCCGGACAGGAAACGCCAGCGCCGCCGACACCCTCTTCGACGGTCTGTCTCACCTCGCCTCCGAGTCTACAGCCGCCACCGTCCATCGAACAGCAGCCACCGATGATGAACGGATTACCGCCGAAAAGCCCCGTCGAGGAGTCGTGCCACAACAACAACAACTCGCACCACTTGACGAACAACAATATTGGCGGGGGTCTGAGCGTCCTCGATACCCTGAAGAGCCCGTTTCGGTTCGACGACGGTCACAGGACGCACTTTCGGTTTGCCGACGAGCTCGGAGCCGCTGGTATGGCCGGACGTCTCGGGGAGTCGCTTATCCCTAAGGGAGACCCGATGGAGGCGAGACTGCAGGAGATGCTACGGTACAACATGGACAAGTACGCGTCACAGAATCTCGACACTTTGCACATCGCGCGGAGGGTCAGAGAGCTCTTGTCCATACATAATATTGGACAAAGACTGTTCGCCAAGTACGTACTCGGGCTGAGCCAAGGCACGGTCAGCGAACTACTTAGCAAACCAAAACCTTGGGACAAGCTGACTGAGAAGGGGAGAGACAGCTACAGAAAGATGCACGGCTGGGCTTGCGACGACAACGCCGTTATGCTGCTCAAATCTCTCATCCCCAAAAAAGAGTATGTTGCAGGCAAGGAGCAAGGGATGCCGACATTTGCCCGAGGTCCGCAAGACGGTGGTCCACAGGACATGAGCGACGAGCGTTTGGCTCACATGCTCTCGGAGTCTGGTCATCTTCAGATGCGTGAGCACGACACCTCGAACGATGCCGACAGCAAAAGCCCCCACAGGGTAGGTTGCCCGAGCCCCTTCAGCAAGGAGAGGATGGACAGTCTCAACAGGCGAGTAAAGAAATACGAAAACGACGACATTCCCCAGGAGAAAGTTGTGAGGATCTATCAAGAGGAACTGGCCAAACTTATGGGACGCAGGGTCGACGATCTTCGCGGACCGAGAGACTTCCCTCCGAGCGCGATGTTTCCTCCCTTTTTCAGCGGGGCCCAGGGCATTCAAGGCATGGACCGTACTCAGGAGGACATCCGCTTAGCGCTGGACGCGTATCACCGTGAATTGCAGAAGCTGAACCAGGGACCTGGTCAGAGCCCTGGCTTAGCCGGTCTCCCCGGTCTTCCTGGACTACCGGGGTTGTTAGCCCTGCAGCAACAAGCCCTGCAGCAACACCACCTCGCCACTAACGGAGGCGGAGTGCAGGACCTCAGCCTCGTCAAGGGGGATCCGAGAAATAAGATGAACGGAGTTTCGGAGGAGGAGAAGGAGAAGATGGAGGAGGCGATGAGACATGCGGGGAGTGCGTTCTCCCTGGTACGACCGAAGCAGGAGCAGCCTATCGGGCCACAGTCCACCCCGGGAGGTTCGAGCGCCAGTTCGCCACTTGGGAACTCTATTCTTCCACCAGCTATGACACCAAGCGAAGAGTTTTCCGGTGCCGCAGCTGCGAGTCCCCTGCAAAGAATGGCCTCGATCACCAATAGCCTAATCAGCCAACCGTCCACCCCCACACATCATTCGCCGAATCAGAGACCACTGAAGGCGGTACTGCCCCCAATAACGCAGCAGCAGTTCGACATGTACAATAATTTGAACACCGAGGACATCGTGAAAAGGGTGAAGGAGCAGCTCTCACAGTACTCAATCTCCCAACGTCTCTTCGGCGAGTCTGTCCTGGGACTCTCGCAAGGTTCGGTCTCTGACCTACTGGCCAGACCGAAGCCGTGGCACATGCTGACACAAAAGGGACGTGAACCGTTCATCAGAATGAAAATGTTCCTCGAGGATGAGAACGCCGTGCACAAGCTAGTCGCTAGCCAGTACAAAATCGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGAACCCCAATGAAGCCGATGCCACCAACGAAACTAGTTCAAGAGCAACTGCAAAATGCTGCGAAAGCCCAAGCAGCTGCTCAAGCGGCTGCTCAGGCGGCGGCACAGCACCAACAAGAGGCTCAAATGCAGCTTGGACCTCCTCAACAGAGTCCGCAGCATCCACAACATCCACAACCACCTCCACCTATGATGCTGACTCCTACTGGGCCTCACCATTCCCACCCACAACTCAGCATGCAAGAGCTTCAGAAAAAGCAGCAGCAGATGAGCCTCCATTCGCCTCACCATCAAATGACGCCTTCTCCGCTACGTGGACTCCATCCGCATATTTCGCCGAGCGTTTACGAAATGGCGGCGCTGACCCAGGACCTGGATACACAGACGATAACGACGAAGATCAAGGAGGCTTTGTTAGCCAACAACATTGGCCAGAAAATCTTTGGCGAGGCGGTACTCGGTCTGTCCCAGGGCTCGGTTAGCGAGCTATTGAGCAAACCAAAACCATGGCATATGCTCAGTATCAAAGGACGCGAGCCGTTCATCAGAATGCAACTGTGGCTCTCGGACGCTCACAATGTGGACCGACTCCAAGCCCTGAAGAACGAGAGACGAGAGGCTAACAAAAGACGGCGAAACAGCGGACCTGGCCACGACAACAGTTCCGACACGTCGAGCAACGACACCGCTGAGTTTTACCATGCAGCTTCGCCAGGACCTGGTCCAGCTTCGGCAAAGAAGCAACGCGTCCTGTTCTCCGAGGAGCAGAAAGAGGCCCTAAGACTCGCTTTCACACTCGATCCGTACCCCAACGTTGCCACGATAGAATTTTTGGCCGGAGAACTCGCCCTTTCCTCGAGGACGATAACCAATTGGTTCCACAACCACAGAATGCGGCTCAAACAACAGTCTCCACACGGTCCTCAGGAGGCGCAGTCTCCCAGAGAACCTGGCCAGCCGTTTGACCCAGTGCAATTCAGACTTCTTCTCAATCAAAGACTGCTAGAGATACAAAAGGAGAGACTGGGGCTAGGAAACGTGCCAATTCCCTACCCTCCGTACTTTAACACTAACCTAGTAGCTCTGGTCGGCAGTGCCCTGAAGGAGCAATGTTCGGGGCTTGACCTCTCAATGGGAGCACTGAAGCGGGAGCCGAACCAGGAGTTTGAGGACGACGACGGTGACGACGCCATGAGTAATCTCGGGAGCGAGGACTCCGACGGTTCTGGCGGTAGCATAAAACGCGAGCCGACGGAAACCCCGGCGCCAGCTACTGTTCGATCGAACAGAAGAAAGCCGGCTGCACCCCAATGGGTGAATCCGGAATGGCAGGAGCCGGCGAGGGCCGGCGACGAGGTCATAATCAACGGAGTCTGCGTCATGCAGACCGACGACTACGGCGTCAAAAGGGAAGCCGAAGAAACTGTGCGCGTAGAACCCACCCCTGTCCAAGACAGATATGAGGAAGATGCGGGCAGTGATTCAGCATCCTCGGCTTCTGGGACGGGACAAGGACTGCAGGACCGAGATAGCCCTATGCCTAGTCCAAAGTCTGCGAGTCAACAGAGTCCCATAACATCGCCGAGGCCACCTTCTTCCGAACAACCCAGTCTCCAGCAGCAGTCGATGCAGCAGGATGATGGCGTCAAGGACGTTAAACACGAGCCTGCAGACGATGCGTGGGACTACTAG
Protein Sequence
MSTPRSPPGPQLFPFMLPSGPIYHGFVVFTSWISQLGEEVTRLQQSIQRLQETNAQATARFEEELELHKQHITRLEARLERQRDYDDLKREINVLRSVDFSQIPTGEPGKSLEHLLLERTKALQQTESLKPPTTPDALGGLASPLQRAATASPHGGNALPSASQPPPPPPPPPPPPPLPSQTRSTPTPSSATSSSSLLFHPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQHPQVSQSQPQLLHGPSLNHLPSPTDSTNTPAKSNTPLGCGMDASEKAPTPIPGQETPAPPTPSSTVCLTSPPSLQPPPSIEQQPPMMNGLPPKSPVEESCHNNNNSHHLTNNNIGGGLSVLDTLKSPFRFDDGHRTHFRFADELGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVAGKEQGMPTFARGPQDGGPQDMSDERLAHMLSESGHLQMREHDTSNDADSKSPHRVGCPSPFSKERMDSLNRRVKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPPFFSGAQGIQGMDRTQEDIRLALDAYHRELQKLNQGPGQSPGLAGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLVKGDPRNKMNGVSEEEKEKMEEAMRHAGSAFSLVRPKQEQPIGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSPNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQEAQMQLGPPQQSPQHPQHPQPPPPMMLTPTGPHHSHPQLSMQELQKKQQQMSLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRNSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQSPHGPQEAQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYPPYFNTNLVALVGSALKEQCSGLDLSMGALKREPNQEFEDDDGDDAMSNLGSEDSDGSGGSIKREPTETPAPATVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAGSDSASSASGTGQGLQDRDSPMPSPKSASQQSPITSPRPPSSEQPSLQQQSMQQDDGVKDVKHEPADDAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2