Elap028032.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- -
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010000702.1:20692-23514[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0024 0.31 12.3 0.5 2 21 208 227 207 228 0.90 2 13 0.015 1.9 9.8 1.5 1 23 234 256 234 257 0.94 3 13 0.0025 0.33 12.3 0.3 2 23 270 292 270 292 0.96 4 13 0.14 18 6.8 0.8 3 23 306 326 306 326 0.92 5 13 8.7e-08 1.1e-05 26.3 1.5 2 23 358 379 357 379 0.97 6 13 0.0063 0.83 11.0 0.4 1 23 384 407 384 407 0.91 7 13 2.1 2.7e+02 3.1 1.6 2 23 478 499 478 499 0.96 8 13 6.7e-05 0.0087 17.2 1.7 1 23 508 530 508 530 0.97 9 13 0.0018 0.23 12.7 2.6 1 23 539 561 539 561 0.96 10 13 0.25 32 6.0 5.3 1 21 567 587 567 588 0.95 11 13 4.3e-05 0.0057 17.8 2.4 1 23 617 639 617 639 0.99 12 13 0.16 21 6.6 0.0 1 23 709 732 709 732 0.97 13 13 2e-05 0.0027 18.9 5.9 1 23 737 760 737 760 0.97
Sequence Information
- Coding Sequence
- ATGACTACCGCTACTCGAAACTGGATCAACGCCTGCCGCCTCTGTTCCGAAGAGAAAAAGGAAATGTTTTCCATATTCGGTGAGGAAGGTGCGCAGCGGAGGGTCCCGCAGAAGATGAGAGCCTGCTTTCCGGTCATGGTCTACAAGACGGACCCCCTGCCTAAACAGATTTGTCAATTTTGCGCCGCCAGACTCGACGACGCTTTCGAATTCAGAGAACGATGCCTCGGCGTGTACAAGCACATGCATATGCAGCTGGTCGCCGACAGGGGATCGGAAACTGTTCAGATATTCCTCGACGCCATGAAAAACTCTCCAGACCCCTGCCAGGCTCAACTCTGCAAGGAAAAGGCGAGAGCTCCGCCTCCGTTGGTTCCGCTTCCCGCCTCGGTGCCGGCGCCTCCGCCAAAAAAGGTGCCTACCGAACCCGTGGTCGTACTGCCCTGCGAAGTGCAGATCAAAGAGGAGCCGATGGACGCAGAGAAACTGGACGAAGGTGGGGAGAATCCTTCGGAGAACGATAAGAGAAGCACGAGTATTTTGGAGCAGGTTTTAACGGGTAATTTGACGATAAACGATCGGAAAGAGGCCAGACCTAAGTTCCAGCTGAGCTCCAAGTGGCGGTGCGCGCCTTGCAACAGATATTATCGGACGAAAGAAAGCCTGCGAAAACACATGCGACTGTTTTGCCCGAGGAGATACAAGTGCAAGAAATGCACCAGCGTCTTTCAGTCCGTCGAGGAACTGGCTAAACACGAGGGATCTCATCATCTCAAAGTTACGCTCAATTTCGACGAGTGTGTCAACGAGTGCGATCAGTGCGACAGAGAGTTTGTTAGCTGGGAGATACTCAGGAATCACAGACAAAGGGATCATCAGTCTAAGTCTGCCTACACGGGCGATACCAACACCTGGTGTTCCCCCTGCAACAGATTTTTTCCCACACTCGATTCGTACATGAATCATAAACAGCTGCATCAGCCCGACTTGGCCTCTTCGCTACCCGCGATGGCGGCCAGACCAGAATCTATAATCAATAAGAATCAATTGTCGGATAACGTGAAGTCGCTGACTTGTCCGACTTGCGGAAAGGTCTGTACTCAGCAGAGTGCGTTGTCGAATCACATGCGAACCCATGAGCCGAAAAAACACAAGTGTGAAATTTGCGGACGTTCTTTTGGACTCTTTATCAGACTAGCGGCGCACAGATTGAGCGAGCATAATCAGCAGCCAATTATGTCCCCTGTTCTGACCAGTGTGGAGCAAGAAGAGGCATTGAACGCCGAGAGGGAAGCCAGGGAAGCTAGAGGAGTCGGGGAAACCGCAGGGGGTAACACGAGTTACGCCAAGGAATCTGACGACGATGAAATTTTCATGGACAGTTTGATGACGGGAAAAAACTCTAGCGTCGGCACGTCAAAGAATGTCGCGCGTTGCGGTATTTGTTTGCAGTGGTTTAACGATCACACGACGATGTTGACTCATCTGCAAACACATTCGGAGAGTTATACTTACAAGAGTTTCAACTGCAGAGTCTGCAAGAAAACGTTTAAAGAAAAATGGCAGCTACTTCGTCACGAGATCACCCACAAGCGAGCGAGTAATTTGGTTCTTTACACCTGTTCGACCTGTAAGAAGACTTTTAAAGACAAGGCGGCGCATAAGGCGCACGAGGCGACGCACGTGGTCGACAAAACTTATCACTGTTCACGATGCAACAAGATATTCTTCAAGGAATTTTCCCTGCTAACGCATCAGTGCAGCGCGGGGAAACAGAACTTTGTAAAACGTGGGGGAACCTCCAAGGCCTCCGCCAAGACCTTGCAGACCTTTGGGGCGTTTAAAAAGTACAAATGCTCCAAGTGCAATGCGACTTTCAACAATTCTCAGTCTAGGAATTCACACATGAGGGTTCACACTCAGGCGCATGCAATGCTCCAAGTTAGGAAAAAAGAATTGAAGAGAGAACTAGAATTGTCGAAGATAATGCCAAAACTCGGGCCGCAAGAGGCTTCGCCTGGTACTTCAGTTCCTGTTCAGGTCGAGCCTTCGCCTGTTATCAAAATCGACGACTCGCCCGCCCCGCCGGTCCTGAAGCGTACCTTGATAAGGACTGCCGGAGGATACCGTTGCGGGGTTTGCCAATCGCCGTTTGTTCTTAGGGAATTGGCCGTCGCTCATTTAAGGTCGGCCCATCCCGCAGCAGCTTTTCACTGCCCACATTGCAAGAAGCAATTTTCAACTAGATACACGTTGTCGCGTCATCTCGAGACTGTTCACCCGGATGAATCGGAGAAGTAA
- Protein Sequence
- MTTATRNWINACRLCSEEKKEMFSIFGEEGAQRRVPQKMRACFPVMVYKTDPLPKQICQFCAARLDDAFEFRERCLGVYKHMHMQLVADRGSETVQIFLDAMKNSPDPCQAQLCKEKARAPPPLVPLPASVPAPPPKKVPTEPVVVLPCEVQIKEEPMDAEKLDEGGENPSENDKRSTSILEQVLTGNLTINDRKEARPKFQLSSKWRCAPCNRYYRTKESLRKHMRLFCPRRYKCKKCTSVFQSVEELAKHEGSHHLKVTLNFDECVNECDQCDREFVSWEILRNHRQRDHQSKSAYTGDTNTWCSPCNRFFPTLDSYMNHKQLHQPDLASSLPAMAARPESIINKNQLSDNVKSLTCPTCGKVCTQQSALSNHMRTHEPKKHKCEICGRSFGLFIRLAAHRLSEHNQQPIMSPVLTSVEQEEALNAEREAREARGVGETAGGNTSYAKESDDDEIFMDSLMTGKNSSVGTSKNVARCGICLQWFNDHTTMLTHLQTHSESYTYKSFNCRVCKKTFKEKWQLLRHEITHKRASNLVLYTCSTCKKTFKDKAAHKAHEATHVVDKTYHCSRCNKIFFKEFSLLTHQCSAGKQNFVKRGGTSKASAKTLQTFGAFKKYKCSKCNATFNNSQSRNSHMRVHTQAHAMLQVRKKELKRELELSKIMPKLGPQEASPGTSVPVQVEPSPVIKIDDSPAPPVLKRTLIRTAGGYRCGVCQSPFVLRELAVAHLRSAHPAAAFHCPHCKKQFSTRYTLSRHLETVHPDESEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00719689;
- 90% Identity
- iTF_00719689;
- 80% Identity
- -