Basic Information

Insect: Euura lappo
Gene Symbol: -
Assembly: GCA_018257835.1
Location: JAEUYN010002243.1:126447-129265[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00032 0.042 15.1 0.2 2 23 126 147 125 147 0.96

2 11 0.01 1.4 10.3 5.7 2 23 214 235 213 235 0.94

3 11 0.00013 0.018 16.3 3.7 1 23 344 366 344 366 0.97

4 11 1e-06 0.00013 23.0 0.4 1 23 372 394 372 394 0.98

5 11 8.5e-07 0.00011 23.2 1.1 1 23 400 422 400 422 0.98

6 11 3.2e-05 0.0042 18.2 1.4 1 23 439 461 439 461 0.97

7 11 2.1e-08 2.7e-06 28.3 2.4 1 23 467 489 467 489 0.99

8 11 8.4e-07 0.00011 23.2 2.0 1 23 495 517 495 517 0.99

9 11 1.2e-06 0.00016 22.7 5.1 1 23 523 545 523 545 0.97

10 11 6.4e-05 0.0083 17.3 4.6 1 23 551 573 551 573 0.95

11 11 1.6e-05 0.0022 19.1 4.1 1 23 579 601 579 601 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00032	0.042	15.1	0.2	2	23	126	147	125	147	0.96
2	11	0.01	1.4	10.3	5.7	2	23	214	235	213	235	0.94
3	11	0.00013	0.018	16.3	3.7	1	23	344	366	344	366	0.97
4	11	1e-06	0.00013	23.0	0.4	1	23	372	394	372	394	0.98
5	11	8.5e-07	0.00011	23.2	1.1	1	23	400	422	400	422	0.98
6	11	3.2e-05	0.0042	18.2	1.4	1	23	439	461	439	461	0.97
7	11	2.1e-08	2.7e-06	28.3	2.4	1	23	467	489	467	489	0.99
8	11	8.4e-07	0.00011	23.2	2.0	1	23	495	517	495	517	0.99
9	11	1.2e-06	0.00016	22.7	5.1	1	23	523	545	523	545	0.97
10	11	6.4e-05	0.0083	17.3	4.6	1	23	551	573	551	573	0.95
11	11	1.6e-05	0.0022	19.1	4.1	1	23	579	601	579	601	0.98

Sequence Information

Coding Sequence: ATGTTCATCGTAACTAAGGAAATAGACAGTGAAAATATAAGCAAATTATGTAGAACGTGTCTGAGAGAGGACGGCGAAAAAATGGTTTGTCTGTTCGTTGGACCAGCTGGCTCTTCGCTGGCTGCGAAACTCAGATCCCTGTCGTGCTTGGAGGTTTGGCAGGGAGACGGACTGCCAGAGAAAATGTGCGATAGATGCGTGACTAGGGCCGAGTCTGCTCTGCTGTACAGGGAACAGTGCCGAGCCGCTGACAGAGCCCTTCGCCAAGCCGCCGTCAAGGTTTCGGGACTGACCTCGTACACTACGGTATCAGGCTGCAAGCTGTATCAACAGAATCAGGGTTTTGTGCCGATCCAAAATCCCCAAAAGACGTTAAAGTGCGTCGAATGCGGGGCCGTATTCGTCAGCTACGAGGAACTATGCGCTCACAGCAGACTCCACGTGCCCTCGATACAGAACGCGACCCCGGTCCAGCACATGCACATAGTGGAGCCCAGGAACAGCTACTTCAACTTGAATAACTTGGGCGGGAATTTAGTGGGCGAAGAAATGTCTCCGTTGTTGAGATCCAGTCTGATGCACGAGACTACGGCGGACGAGGACGACCGCAGCGGACCGAGCAGAGCGGCCTGCGCGCTCCACTGCTCTCTGTGCAATCACACCTTCACGAACAGGACTCAGTTGATAAGCCACAATTTCACCCACAGCTCGGATCACGTTAATTTATCATCCGTCGAGGACACGAACGTAGAGGTCGGAGAGGATTCTTCCAATCAGATAGCGCAGAATTTGAGCTACGACAGAAGAGTGGATCAGAGGAGCGACGACTCCATAGAAAACCTGTCCTTCTCGACCAGGAAGATCGGGGGTCTCGATTATCCTCGGGATGAACAATTGGGGGAAAACCGACCCTTTCAGTGTCTCGAAAACGAGGGAATTCAGATCCCGGAAAACTTGGTGTTCGACGCCAAAGCTTCGGGACCCGAGGAGCTGAAGAACTCCTCTTTGGCTCCGGTCAAGTACAAGAAACACAGATGCTTGGTGTGCCAGAAATCATTCGCCCAGAGGTCGAAGCTGCTCACTCACCAGTTTTCCCACACCGGCCAGAGGCCCTTCGAATGCTCGATATGCGAGAAGGCGTACACTTCCAAGAGTAAACTGAACGCGCACGTCAGATTGCACACGAAAACGAACGTCCACGTGTGTTCGATGTGCGGTAAGACGTTCGCTTTCGCTTCGTACCTGGAGGATCATCTGAAGACTCATAAATTCGGAGAGGAGAAGCTCGTCGGTTCCGGAGGGAAGGGAGTCACGTTCGATTGCGGCGTTTGCGACAAGAAATTCCGGTTCGTTAAGAACTTCAAAGCGCACCTGAGGCTTCATACGGGCGAGAATTTATTCCAGTGCGAATATTGCGACAAACGTTTCACCCAGAAGTATAACTTGAAGGTACACTTGGAGACGCACAAAGACCTGAAGGCTTACAAGTGCGAATATTGCGAGAAGAGGTTCAACCAGCACGGGAATCTGGTCGAGCATTTGAGGATCCACAAAAAATTGAAACCCCACAAATGCGATTTCTGCGGCAAATCATTCTCCCAGTCTAGTCATCTGAAAAACCACGAAATATCCCACAAATCGGAGCGGAATCACTCCTGCAGACTGTGCGGAAAGAAGTTCAAGCTGGCCAGTCACCTGAAGAGACACTTGGACCTTCACAGCGGGGGCAAATCGCACAAATGCCTGGAATGCAATCAGATGTTCTCTCAAGCCTTCAGTCTGAAAAGGCACTTGAAGCGACACGCCGACGTTCATATCTGA
Protein Sequence: MFIVTKEIDSENISKLCRTCLREDGEKMVCLFVGPAGSSLAAKLRSLSCLEVWQGDGLPEKMCDRCVTRAESALLYREQCRAADRALRQAAVKVSGLTSYTTVSGCKLYQQNQGFVPIQNPQKTLKCVECGAVFVSYEELCAHSRLHVPSIQNATPVQHMHIVEPRNSYFNLNNLGGNLVGEEMSPLLRSSLMHETTADEDDRSGPSRAACALHCSLCNHTFTNRTQLISHNFTHSSDHVNLSSVEDTNVEVGEDSSNQIAQNLSYDRRVDQRSDDSIENLSFSTRKIGGLDYPRDEQLGENRPFQCLENEGIQIPENLVFDAKASGPEELKNSSLAPVKYKKHRCLVCQKSFAQRSKLLTHQFSHTGQRPFECSICEKAYTSKSKLNAHVRLHTKTNVHVCSMCGKTFAFASYLEDHLKTHKFGEEKLVGSGGKGVTFDCGVCDKKFRFVKNFKAHLRLHTGENLFQCEYCDKRFTQKYNLKVHLETHKDLKAYKCEYCEKRFNQHGNLVEHLRIHKKLKPHKCDFCGKSFSQSSHLKNHEISHKSERNHSCRLCGKKFKLASHLKRHLDLHSGGKSHKCLECNQMFSQAFSLKRHLKRHADVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01414394;
90% Identity: -
80% Identity: -