Elap026899.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- -
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010001836.1:14344-25229[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 7.5e-06 0.00098 20.2 1.0 1 23 223 245 223 245 0.98 2 30 0.0032 0.42 11.9 1.9 1 23 268 291 268 291 0.96 3 30 0.00027 0.036 15.3 1.0 2 23 298 320 297 320 0.96 4 30 0.0015 0.2 12.9 0.5 1 21 340 360 340 361 0.94 5 30 0.00022 0.028 15.6 0.1 2 23 457 478 456 478 0.95 6 30 0.017 2.2 9.7 0.2 1 23 484 507 484 507 0.86 7 30 0.00014 0.019 16.2 0.1 1 23 571 594 571 594 0.96 8 30 0.012 1.6 10.1 0.7 1 23 600 623 600 623 0.96 9 30 0.14 19 6.7 1.5 1 23 636 658 636 658 0.97 10 30 4.9e-05 0.0064 17.7 0.8 3 23 703 724 701 724 0.96 11 30 0.036 4.7 8.6 1.1 2 23 788 811 787 811 0.93 12 30 3.7 4.9e+02 2.3 0.0 2 23 820 842 820 842 0.84 13 30 0.022 2.8 9.3 0.0 2 23 849 871 848 871 0.95 14 30 1.6e-05 0.002 19.2 1.2 1 23 879 901 879 901 0.98 15 30 0.88 1.2e+02 4.3 1.0 3 23 934 956 932 956 0.86 16 30 0.00025 0.033 15.4 3.3 1 23 959 982 959 982 0.97 17 30 0.0066 0.87 10.9 0.4 2 23 989 1011 988 1011 0.95 18 30 0.0039 0.51 11.7 5.1 1 21 1038 1058 1038 1059 0.95 19 30 0.0032 0.42 11.9 1.8 2 23 1073 1094 1072 1095 0.93 20 30 0.85 1.1e+02 4.3 2.3 1 23 1098 1120 1098 1121 0.95 21 30 0.0042 0.55 11.6 2.5 2 23 1128 1151 1127 1151 0.93 22 30 1.2 1.5e+02 3.9 0.2 2 23 1159 1181 1159 1181 0.95 23 30 3 3.9e+02 2.6 0.0 2 23 1188 1210 1187 1210 0.88 24 30 0.27 36 5.9 2.7 2 23 1219 1241 1219 1241 0.96 25 30 0.092 12 7.3 0.3 2 23 1247 1269 1247 1269 0.95 26 30 0.00019 0.025 15.8 1.9 1 21 1382 1402 1382 1403 0.96 27 30 0.59 78 4.8 1.3 2 23 1507 1529 1506 1529 0.93 28 30 0.82 1.1e+02 4.3 0.5 2 23 1536 1558 1535 1558 0.94 29 30 0.83 1.1e+02 4.3 2.5 1 23 1569 1591 1569 1591 0.97 30 30 0.057 7.4 8.0 0.7 3 20 1600 1617 1600 1619 0.96
Sequence Information
- Coding Sequence
- ATGGAGTCCAAGGAACGCTACACCGAGCTCTGCAGGCTCTGCGCCTCATACGACGCTATTAAAATGGACATTTTCGGTAAAGAGGGACGGAGTCGTCAGCTAGTCGACAAAATTCAGACCTGCCTTCCCTTCGAGATCGCAGAAAATGACAGACTACCAAAATGCGTATGCTATAGATGCATGTACAACTTGGAAAATTTCTACGATTTTCGAACAGCGTGCGTTAACGCGGTTGCCTTACTTGAGAGGTGTCTACCGGCCTATCAATGCGACGACGCTGGTAATGGAGGGCAGCATCGTGGACAGTTTTCACAGCTGCGCTCGGAGCTCCTTAAGGACAAAGAAAATATGCCGATACTCATTCCAGAGGCCCCCATAGTCAATCCAAACGGAGCTTTAGGTACTCCGCCTAGATTGAATTCGGACGGAGAAGCGGATCATGAAATCGAAGAAATTCTCTACCAGGGTGTCAGCGATGACGGTGGCGATGATCACGACGATCCGAAATCCGACGAGTATGAAATGGACATGGAAACAAATCCGAGTGATTTTTTGGAAATGACGTCAATAGTTACCGAAGACGCGGAGGATGGGGAGTCCGCGAATATTCAAACAGCTAACAACGAATCGACCCTGTTTCAACACACTTCGGAACAGCACGAAGTTTACGTGTGTTCTTTGTGCAACAAGGCTTTCAGCTCTAAAGGACACTTGTCGCTACATGCTAGAATCCACGTAGGCGCCGGCGATATCGTAGGGGAAAAAGTAATAACGGACGATCATACCTCGTACAAAAGACCCTATCAATGCGATTTGTGCAACAAATCGTACTCCACTGCCAAACACAGATGGGGTCACGTATCTACGACTCATAGGGGTCATCCAGCGGTGACCTGCAGGTATTGTTCGAGGATTTATTCTACCAGAACAAACCTGGAGGAGCACATAAAGTCTCGTCACGCGGGACTTCCGCCTCCGCCGGAATTGCCAGCGCCTTACATTCAGCAAGACAATAAATTTCAGTGTAGAACGTGTCCCAAGATGTATACGAATGTCACGGATTTGAATAAACACAATCGAGTTTGCGCTGGAAATAGAAAAAAGGAATCGGCGATAAAAAATTCAGCACAGAAGAAAAAGAACCCCGTTGACACGTCAGATCTCTCCAGTATCGAATCTGAAGACGGAGATAAGGATTATAGAGACGCCGAAGCTAAGCTTGCTAAGAATCCTCAGCTAACTATACTTAAACAAGCTTTAACAAAGAAAGACAATTTGAAAAGAGATCACGAAGAATCGAGGGTCAACCATAAGCCCAAGAAAATATCAAGGACAGACAGCAGCGAGACGGATGGGCAGAAGAGGTGGTACTGCGAGACGTGTCCCAAGAGTTTTACATCCGTGGACAGCCTGAAGGAACACGAACTCGTCCACGACGCCGACAAGCCTTACATTTGTATATTGTGTGAAAAGACTTTTGCGCTGAAATCGTCGTTGAGCAGACACATAGTAGCTTCTCACGGGGTCGATCCTAGTCCCATACTCGAAAGCGACAAATGCCTGAAGAGGTCTGCCAACAGACTCGCGGAGAGAAATGCTAACGATAGTAACAGAGAGATTAACGAGTCTTCGTTATCTCCTCAGGATAATCCCGATAACGAATCTGAGCACGAAAGCAGTCCTGAAAACATGATTGAAATCGAGACTGTATTCGTGTGTGAAATCTGTACCAGAGATTTCAATGATCGTGCTTCTTTATGGCTTCATATCAGAGCAACTCACAAGGAGTACGCGGCATTCGCCTGCGGCGTGTGTTTGAAAATATGCTCGGACAACACTCAGCTGCTTAATCACGTCAACATGTATCACGGAGGTTCTAAGTTACAAGTTTCCGAACAAAGAAGGTACAGCTGTACGATCTGTGGAAGACAACACGATTCGAGAAAAAAATTGATCACTCATGTCTCCATACACAACGTTGACCCTGGTTACGATCCGGCAAGCTTCGTACAACTGAATAGTAATTACTATAATGAAAATTTTAACAGCAACGAAGCTCACGATCAGGCCACAGAGTTCGATGGCGAAGATGGTGAAAAAATGGATTGCTATATTTGTTACAAGTCTTTTCCCAGCGAGGATCACCTCATACGCCATCAAAGAAATGCTCACAAGTCCGAACCGCTGGCACCAATGGGAGAATCTGCTGGAAATGGAAGCGGGACTGGTTCTGTGAGTGGTAATGGAAACCGAGCCCAGTATCATTTATTTTTCGTATGCGAATTATGTGGTAGTTCTCACCCAAGCAAATGGGAACGCTGGCTTCATGTCAGTAGTATTCACAGCAATGAGCCTGCTATTAGATGTGAACGTGACACTTGCGGAAAAATTTTTGCTACCAGATCACTGCGCAACGATCATGTTCAGCATCACTCTGCTCAAGGCGCGTCTCCGAACACTTGTGAAATATGTGGAAAACTTTGGGGTAGCCGTGTGGATTATTGGAAGCACGTGATGGGTGTTCACTCCGATACCGTGCCTTTGATTTGCGGCGTTTGTCTTAAGGTTTTCCCGGACGTTATCCAACTCAGTGCCCACGTGAAGACCAAACACTGGCCACTCACGAACGGGGATTTCAGCTGCGATATTTGCGGAAGACCGTATTCTAACAAGTCGAAAATGTCCAGACACAGAAAGATCCACGGTCTAGACGTAGACAGCTACATAAATAACAGTATAAATGAGACTATTAACAATTCCGCAAGGATCGATCACAGCATTTCCGACTCTGATCTGAACTGCGAGATGTGCGTCAATATGAAATTTACAGACTTGGAAGAACTGTGTAATCACAGGAGAAATGTTCACGGTTTATTCCCGTGTGATTTGTGCAACAAATGTTACGGACGAACTTCGCATTTGTGGAAACACGTTAATCGTGTTCACAAAGGACACGAGGATGTCACCTGCAGGTACTGTCTGAAGACGAGTGCTTCGAAAGAACATTTAGCCGCTCATATAGCAAAGATTCACAGGTACGAACCTGAGACTAAAAAGGAAATCAGAGAATCGTCGAATTTCAAGTCTCCAAATGTTGACGACGATACACCACATCACTGCGAAAAGTGTAACAAAGGATTCCACAAACGATACTTACTTCGTCGTCATATGAAAGGGTGTCAGAACTACAGGAAAGATCCTGGGGCGTTGTTGACTCGGTGTAGGGCCTGCGAAAGGATATTCAAAGACCGCGCTAGTCTCCAAAAACACATTGAAAATCACCATAGCACTTACACTTGCCACTTGTGCAACGAAGACGTTACCTCGAAGCTTGGGATTATGACGCATAACAGAGTTCATCACATGAATCATCCCGATCTGACGTGCGATCACAGCAACTGCAAGAAGTTATTCAGGACCAGAGAGGACTTGGAGTCGCACATGAAAGATCACAAGTATCACAACACGCCGAATGTATGTGATTTTTGCGGTGATACCGTAGAAAACAAGCTCAAATTGAAAATGCACATATTGTCGCTGCATAGAAACGAGATTGGCGTATCTTGCGGCGTTTGTTTGATCCCAATGAAGGACCCTAAGGAACTGAAAAGACACGTCGAAGAAGTACACGACCACATTTTGTCCAAACCAAACACTTGCCAAGTATGCGGGAAGCAGTACGCTTCCAAGTGGAAGGCCTTTGATCACACTAAGAAGTGTCACGGGAAAGTATTCAGGACTTGCAAACAGTGTCTAGCTGTTTTTACCAAAGACGAGGAACTGAGGAATCATTACGCCAGTGTTCACAATGTTCCGAAAGATCAGCTCTCCGGGTTTGATTACAGATTAGAAACCTCGACTGGTAAACCTGACGAGTTTGAGCAGCCAGATTTGCACATTAAAGAAGAACCGGACGATATGGATTTCGACATTGACGCGGGCGACGAAGATTCTAACGATCACAAAAGAAAGAGGCCTTTGACCGACACGTTCGACTGCGATTTGTGTCACGAGATATTTTTGAACGAGGAGACATTGTCGCAACATTGTCGTAACGTGCACAACATCAATACTGCTAAGAAATTCAAAAAATCGAAAAAGGACAGCAGCGGAGCTAAAAGAAAAATGAGAAACAGAGAAAATTTCGAATGCAAGAATTGCGGAAAGCAGTTCTGCACAAAAACTCTATTCTGGAATCACATAAACGCTTGCACTAGACGCAACAGCGCAAATAAAGATAGCAACAACAGTAACAACAGCTTTCCGAGCTCGATTCTAGAAGCGCATTTGAAAAATAATAATCAAATCAAGAAAGAAGAGCCCGATCCGGTTCTGAACGAATCGTCAAATCTGAATATCCCAGACTTTAACTTGTTCGAAGATATAAACATGCAACTATCGGGTCAAAAACCTGTTCCTGATCTGATGCCAATATCTTTGGCGAAAGGAAATTCCAGCAGCAAATGTTCGCGGAAGGACTCTAGAAAAGTCTACGACGAATCTACGAACACTGAATGCGCGTGCGAAGTTTGCGGCAAGCAGTGGCCAGCCAAAAAACACTTGTGGCAACATCTGATTCGGTTTCACAGAGCCGAGGCAGCCGTTACGTGCGGAGTTTGCTTAAAACTGTGCCAGACGTACGAGGACTTGGCAAAGCACTTGAAGGAAGCTCATCAATCGACTTTGACCGGCGAAGGAAACAACTTCACTTGCAAAACTTGCGGAAGATATCACAACGCGAGAAGCAAATTATTGCTGCATATGAGCATTCACATTAATTACAACGGCAGCGAGTGGTGTCAGAATTGCCATCAAGGGTTCGAGGACGCCGAAAAGCTGACCGAACACATGGAACATTGCACTGGGAAACAGGAAGAATTCGAAGATCACAGTAACGACATCGACGCCGGCGATAGGAACGAGAATGATAAGGGCAGTATGATAGATGACGATAACTCGCTAATGGAGGAGGTAGAGGAGGTGGAATTTGAATCCGAGGTCGAAGGAGATGCGACTGCGAATCACGAAGACAGTAACAGCGATAATTCGGAGAGCGAAGCTAGTAATGACAGCATGAGCGACGAGGAAGAAAATGACGATGAGGACGAGGGGGTGGAAGAAGACGACGGAGATGAGGAAAATGAAGTCGACGACGAGTCTAGATCCCATAGTAGAGTCACCGGAGATGTTAGTAGCGATTCTCAGAGCGAGAACGAGGACTCTGAGCATCCTGACGACGATATATCCGAGCACAGTGACAATGATCAAAACGATAAGGAGATAAACGATACAAGCCTTCTAAGCGGGACTGACGACACAACCGTCATGGAAAACGAAGACTGTAAAGACGAGGATCGTAAAGGGAAAGAAAAGACTGTGGAGATGGCACAGAGCCCGGATAATCGAACAGTAGATTCGGAGACAGTGAAGAAAGAGAGAGGGGATTCTCAAGAAAGTCAGAACCAATCGCATGATGAAAAGGAGTTTGAAGAAAAACCTTGCGAATTACAGAATCAAGCTCTCTTGAAAGAAGAACCTGGGGATTACTTGGACGACGAAGGTCCCCCTGTACTGAGCCCAATGGTACCATTACTCATTGAAAATGACGCGGAAGACCAGGACACGGATCAGATTGATGCAGTAGAGCATAAATTGAGCCCGATGGTGGCAATACCTCCGAGCATTGAAAAGCCCGACGTTAAGTGCGAAATAGAGGAGATCAAAGATGAAATAGAGAAGGGAGAATCGTCACAGTCGGCTTCTATTCAATCGATGGAAATTGAAGACACTACAGAGACGGGCGGAGATCAAGATGCGGCTGCAAATACTCTAACAGAAATACTGGAATATGATTCGGATCACGATAAAGCAGAAAACGAACACCAGGATGAGGATGAAAATCTTGAAGACGAAGAGAAGGCTTCCGACGATGAAGAAAAGGGCTCCGATAATGAAGATAAAGCTTCCGAAGAGGAAGAGAAAAATTCTGAAGATGAAGAGAAAATGTCTGACGTTGAAGAAGTTTCAGAAAATGAGGATGCCGTTGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAGGATGAGGAGGAAGTAGGAGATGGAGAAGAGCAGTCAGATAATGATCATCACGAGGAAGAGATTTTAGAGAACTGCGACGAGGATCATGAAGAAGGTTTTGAGGAGATTCAAAATGTGATCGATATCAGCGACGAAGTGTTTGAGGAGAATTCTGACGGGGAAATCGAGGGTATGGAAGTGGATGAGGACGCAGATACTGTAGAAATACCTAATTTAGACGGAACTGTACTTATGGTGGCCAATGACGCCGATGGTAATCAGATATTGATACAGCGAAATGTTTCCGACTTTCCGCATGACGATTCAAATCCTGAGGTAACCGAGTATATTATAGAAGATGAAAACGAATACGAAATAAGTAATTATGAGATGGGGTCAAACGACGAGGATGCGACGCATGAACAACAGTCGGACGATGATCCTGAGAATTCGGAAGACGAGAATAACGTAGAATCAGCCGAGAACGTGGAGTTATCGACGATCAGTGCCAAAAGTAAAGTGTCAAGGACGTAA
- Protein Sequence
- MESKERYTELCRLCASYDAIKMDIFGKEGRSRQLVDKIQTCLPFEIAENDRLPKCVCYRCMYNLENFYDFRTACVNAVALLERCLPAYQCDDAGNGGQHRGQFSQLRSELLKDKENMPILIPEAPIVNPNGALGTPPRLNSDGEADHEIEEILYQGVSDDGGDDHDDPKSDEYEMDMETNPSDFLEMTSIVTEDAEDGESANIQTANNESTLFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDIVGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHAGLPPPPELPAPYIQQDNKFQCRTCPKMYTNVTDLNKHNRVCAGNRKKESAIKNSAQKKKNPVDTSDLSSIESEDGDKDYRDAEAKLAKNPQLTILKQALTKKDNLKRDHEESRVNHKPKKISRTDSSETDGQKRWYCETCPKSFTSVDSLKEHELVHDADKPYICILCEKTFALKSSLSRHIVASHGVDPSPILESDKCLKRSANRLAERNANDSNREINESSLSPQDNPDNESEHESSPENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNTQLLNHVNMYHGGSKLQVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNSNYYNENFNSNEAHDQATEFDGEDGEKMDCYICYKSFPSEDHLIRHQRNAHKSEPLAPMGESAGNGSGTGSVSGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSSIHSNEPAIRCERDTCGKIFATRSLRNDHVQHHSAQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSAHVKTKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDVDSYINNSINETINNSARIDHSISDSDLNCEMCVNMKFTDLEELCNHRRNVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASKEHLAAHIAKIHRYEPETKKEIRESSNFKSPNVDDDTPHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNEDVTSKLGIMTHNRVHHMNHPDLTCDHSNCKKLFRTREDLESHMKDHKYHNTPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKELKRHVEEVHDHILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTKDEELRNHYASVHNVPKDQLSGFDYRLETSTGKPDEFEQPDLHIKEEPDDMDFDIDAGDEDSNDHKRKRPLTDTFDCDLCHEIFLNEETLSQHCRNVHNINTAKKFKKSKKDSSGAKRKMRNRENFECKNCGKQFCTKTLFWNHINACTRRNSANKDSNNSNNSFPSSILEAHLKNNNQIKKEEPDPVLNESSNLNIPDFNLFEDINMQLSGQKPVPDLMPISLAKGNSSSKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCQTYEDLAKHLKEAHQSTLTGEGNNFTCKTCGRYHNARSKLLLHMSIHINYNGSEWCQNCHQGFEDAEKLTEHMEHCTGKQEEFEDHSNDIDAGDRNENDKGSMIDDDNSLMEEVEEVEFESEVEGDATANHEDSNSDNSESEASNDSMSDEEENDDEDEGVEEDDGDEENEVDDESRSHSRVTGDVSSDSQSENEDSEHPDDDISEHSDNDQNDKEINDTSLLSGTDDTTVMENEDCKDEDRKGKEKTVEMAQSPDNRTVDSETVKKERGDSQESQNQSHDEKEFEEKPCELQNQALLKEEPGDYLDDEGPPVLSPMVPLLIENDAEDQDTDQIDAVEHKLSPMVAIPPSIEKPDVKCEIEEIKDEIEKGESSQSASIQSMEIEDTTETGGDQDAAANTLTEILEYDSDHDKAENEHQDEDENLEDEEKASDDEEKGSDNEDKASEEEEKNSEDEEKMSDVEEVSENEDAVVEEEEEEEEEEDEEDEEEVGDGEEQSDNDHHEEEILENCDEDHEEGFEEIQNVIDISDEVFEENSDGEIEGMEVDEDADTVEIPNLDGTVLMVANDADGNQILIQRNVSDFPHDDSNPEVTEYIIEDENEYEISNYEMGSNDEDATHEQQSDDDPENSEDENNVESAENVELSTISAKSKVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00719623;
- 90% Identity
- -
- 80% Identity
- -