Elap007501.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- ZNF296
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010002349.1:274370-277591[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0014 0.19 13.0 3.7 2 23 94 116 93 116 0.95 2 16 0.0022 0.29 12.4 0.3 1 19 122 140 122 142 0.95 3 16 0.0011 0.14 13.4 1.9 1 23 151 174 151 174 0.95 4 16 1.5 2e+02 3.5 1.6 2 21 196 215 195 218 0.82 5 16 0.002 0.26 12.6 0.9 2 23 230 251 229 251 0.96 6 16 3.1e-05 0.004 18.3 2.7 1 23 257 279 257 279 0.96 7 16 3.2e-07 4.2e-05 24.5 1.5 1 23 285 307 285 307 0.98 8 16 6.6e-05 0.0086 17.2 4.2 2 23 405 426 404 426 0.97 9 16 0.00077 0.1 13.9 3.0 1 19 432 450 432 451 0.97 10 16 0.0022 0.29 12.4 1.4 1 23 460 483 460 483 0.96 11 16 0.00038 0.05 14.8 1.4 1 23 490 513 490 513 0.96 12 16 3.3e-05 0.0043 18.2 0.3 2 23 520 541 519 541 0.96 13 16 8.1e-07 0.00011 23.2 2.6 1 23 548 570 548 570 0.98 14 16 0.0005 0.065 14.5 0.3 2 23 575 597 574 597 0.94 15 16 5e-06 0.00065 20.8 0.2 3 23 605 625 604 625 0.98 16 16 4.9e-07 6.4e-05 23.9 4.0 1 23 631 653 631 654 0.96
Sequence Information
- Coding Sequence
- ATGGACCGTTCTAAAGTAGTTATGCATAAGATCAACATCTGGCGTAAGAAATTGAAGACACTTCTCACCAAAGATTTGAAGACAGCAAGTCTATCGAAGAGTATGGGAAACAATCTAGACCAGGTGAAAGTAGAGGTCTTGCCAATTGTCCCCGCAACGCCTCCACCGCCAGTTGAAACAAACGAAAAAACCCTTGTTGACATCAAATTGGAACCAAGTTTAGATCCGATCGAAGATCCTCTCAAAGTGACGACGTTTGAGGAAGCAATGAATGAGCTGAGCTGTTTCCTTTGTGCAAAGAAATATCATACCAAGTCAAATTTGAAAAGGCATTACCTTAGAGTCCACGATACCAAAAGATATTTCAAGTGTCCGCAGTGCCCGAAGAGTTTTTGGGCAAGATATGAACTGAAGAGGCATTCCATTTGTCACAGCGCCAGCACTACTTCGTACCAATGCAAAATATGCAAGGTCGCGTACAAGAGCATTCATGCTTTGAAAAAACATGAGACGAAAGAACATGACGAGAGCGATAGAAGGTTTAGAGAAGACATTGCACTTCAGAAACATGATAAAAAACCGCTTACCTGCAGATCTTGCGGCATTGCTTTTCGTGTCAGAAGACAGCTCATGTTCCACTGCAGGAGGATACATCCAGAAATGAAGACGAATGAAATTATGGGTACCACCTGCGATGTTTGTGGCAAAGTTTTGTCCAGCATAGGATGTCTGCTTCGTCACAAGGAGAGACACGAACCGACTAAATCGTACCTATGTGATTTTTGCGGTAAAAGTTTGAGCACCACCGAACACTTGAAGAATCATCGTCGCATACACACCGGCGAAAGACCATACGTTTGCGATTTTTGCGGCAAGAGATTTACAGACTCTAAAAATCTTCTCACTCACAAACGTATTCACACGGGAGAAAAACCGTACAAGATCAATGCCTGGCGCAAGAAACTGAAGAGCCTTCTCGCCAAAGATTCGAAGATCGAAAAGGAACTGGACGCGCTGATGAACGCGACAAACTCCATGAAAGATAATCCATACCGGTTGGAAGTGGTGGTCGTGCCAAAGTCCCACAAACCGGCGTCACCGTCGGTTGATACAATCGTTGAAACCTCTGTTCCCGTCCAATCGGAACCGAATTCAGATCCGGTCGACGATGCTCTTGATTCGACGATGTTTGGCGAAGCCACGGATGAACTGACCTGTTTCATTTGTAAAAAGGAGTTCAATCACAAGTCCGACGTGACGAGGCACCTGAAACGACACGACACCAAAAGACCTTTCAACTGCGAGCACTGCTCCAAGAGTTTCAGGTCGGGATACGATCTGAAAAAACATTCCGTTTGCCACAACGTCCTCTCTCCGTACCAATGCGACATATGCAAGTTGCTGTACAAGTCAAATCAAGCGCTGAAGCAGCATAAGATAAGGAAACACGACGATCTGGAGTTTCAGTTCACATGCGACAGGTGCAGCAAACAGTTTAAGTTAAAAGGCGACTTAAGCACTCACATCAAGGCCTATCACACAGAGAAGCCGCCGTTGATATGCGAGGTTTGTGGGAAGTCTTACACCAATCCGACTACCATGAGCACCCATAAACGAATACACGAAAAAAATGCTCACCAGTATCGTTGTACCGTATGCGAAAAGAGCTTCAGGTCTGAGCATAATCTGAAAAATCATTTGCTAATTCACGAGAAGGGGATATCGTGCAACGTTTGCGGTATGGAATTCAAGAGCGCCAAAAATCTCGGATATCACAAGAGGGCGAAGCACAAGAAACCCGAAGTTAACATATGCTCGATTTGTAAGAAACCGTTCAGCAGCACCGGCAGCTTGAGGGCGCACATCCTCACTCACACCGGAGAGAGACCCTACAAGTGCGATCAGTGCGGCGAATCTTTTACGCAGAGATCTAGCATGATGAGACACAGGCGTAGTCATCATCCGGACAGATTCTCACCACCTCCGCCTATTCCCATTATCGCTATTGTTAGAGACATAGAAGACAAAATCCTCGCTAAAAAGTAG
- Protein Sequence
- MDRSKVVMHKINIWRKKLKTLLTKDLKTASLSKSMGNNLDQVKVEVLPIVPATPPPPVETNEKTLVDIKLEPSLDPIEDPLKVTTFEEAMNELSCFLCAKKYHTKSNLKRHYLRVHDTKRYFKCPQCPKSFWARYELKRHSICHSASTTSYQCKICKVAYKSIHALKKHETKEHDESDRRFREDIALQKHDKKPLTCRSCGIAFRVRRQLMFHCRRIHPEMKTNEIMGTTCDVCGKVLSSIGCLLRHKERHEPTKSYLCDFCGKSLSTTEHLKNHRRIHTGERPYVCDFCGKRFTDSKNLLTHKRIHTGEKPYKINAWRKKLKSLLAKDSKIEKELDALMNATNSMKDNPYRLEVVVVPKSHKPASPSVDTIVETSVPVQSEPNSDPVDDALDSTMFGEATDELTCFICKKEFNHKSDVTRHLKRHDTKRPFNCEHCSKSFRSGYDLKKHSVCHNVLSPYQCDICKLLYKSNQALKQHKIRKHDDLEFQFTCDRCSKQFKLKGDLSTHIKAYHTEKPPLICEVCGKSYTNPTTMSTHKRIHEKNAHQYRCTVCEKSFRSEHNLKNHLLIHEKGISCNVCGMEFKSAKNLGYHKRAKHKKPEVNICSICKKPFSSTGSLRAHILTHTGERPYKCDQCGESFTQRSSMMRHRRSHHPDRFSPPPPIPIIAIVRDIEDKILAKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -