Elap015269.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- -
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010000849.1:95475-95888[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-06 0.0012 19.3 0.0 2 41 15 54 14 58 0.89 2 2 0.29 2.5e+02 2.2 0.0 27 38 91 103 91 108 0.78
Sequence Information
- Coding Sequence
- ATGAGAACTTATAAAAGGAAAACTGACAACTGTCAGACACCCCCCGAAGTCATCATTGCGGCTGTGAAACGGATCAAAACCGGAGGCCAGTCTATTCGATTCGTCGCAAAAGAGTTTGGAATACCAAGCAGAAGCTTGACGCGATATTTCGCACAAGCGATTGATCTGGAGACGATGGAGGATGATCCCAAATCGTTGCGCATTGGATATGTACCTCATAACAGGGTGTTTGAACAAAAAGAAGAAGATTTATTAGAAGAAACGTCAAGAAATGTTCCGACATCTACTTTGGCTTGTCGCCCAAAGAAATCAGAAAGTTTGCGTTCCAGTATGCAAAAGTCCTCGACAAGAAAATACCTGGTAGTTGGTCGACAAACGAAATGGCGGGGCCTGATTGGTTCAGTTCTTTCATGA
- Protein Sequence
- MRTYKRKTDNCQTPPEVIIAAVKRIKTGGQSIRFVAKEFGIPSRSLTRYFAQAIDLETMEDDPKSLRIGYVPHNRVFEQKEEDLLEETSRNVPTSTLACRPKKSESLRSSMQKSSTRKYLVVGRQTKWRGLIGSVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -