Elap010625.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- -
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010001307.1:157475-158089[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-11 2.4e-08 34.3 0.0 4 41 22 59 19 62 0.92 2 2 7.4 6.4e+03 -2.3 0.0 35 45 128 138 126 138 0.79
Sequence Information
- Coding Sequence
- ATGTCAGATAATCGGGAATCTGAGAAAAAGAAAAAACGGGAATTTCACAATTATAGTGAAAGATCCCTAGCGGAAGCCTTGTTAAAAGTTCGGACAAATGATATGTCCGCTAGAAAAGCTGGAAATATGTACAATATACCAAGGAGTACATTAGGTAATATACTACGCGGTCGTGTGCCAGAAAATTCCCGGATAATGGGCCCGAGTACCGTTTTGACCGCTGCGGAAGAAGCACGATTAGTCGAATGGTGCATCGTATTGGCGAAGTGTGGTTTTCCGCGACGAAACGATGATTTGATACAGACGGTTCATAAAATCATTACTGAAGATGGCAGGAAAACACCATTTAAGAACGGCCGTCCAGGAAAAAAGTGGCTCACCTCTTTCTTGAAGCGGCATCCTGAGCTGTCGCAACGGCCGTATGAAGGCATTAGCAAAGGTCGAGCTGTTGTAACCGAACAATCCCTGCGAAGATGGTTCTCCGATCTCAAACTTTTTTTGCAAGAAAACAATTACGAAGATGTTCTCTTGGATCCGACTCGAATCTTCAATGGCGATGAAGCTGGTTTCAGTATGTGTCCAAAAGCAGGAAAGGTTATTGGCCCAAAGGGGTGA
- Protein Sequence
- MSDNRESEKKKKREFHNYSERSLAEALLKVRTNDMSARKAGNMYNIPRSTLGNILRGRVPENSRIMGPSTVLTAAEEARLVEWCIVLAKCGFPRRNDDLIQTVHKIITEDGRKTPFKNGRPGKKWLTSFLKRHPELSQRPYEGISKGRAVVTEQSLRRWFSDLKLFLQENNYEDVLLDPTRIFNGDEAGFSMCPKAGKVIGPKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01413079;
- 90% Identity
- -
- 80% Identity
- -