Elap011602.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- -
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010002104.1:19845-30281[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-12 7e-09 36.0 0.1 5 36 111 142 110 144 0.95 2 2 1.4 1.2e+03 0.1 0.0 21 30 182 191 181 194 0.83
Sequence Information
- Coding Sequence
- ATGCGCAAAACAAAGTGCGCAGGTCCGGCGTGTTACGTTGCCATTGACGACGAGGTGGTCGGAATTCCGACTGATCATGTAAGCGATGAAGAAGTGCTACTTCAAGCTGCGAATTGTGACAACTCAGAGATGGTTCCTGCACCACACATTGCTGATTACGAGCGCACCGAAGCATTGGCAGAGACGAACGTCCGTACTGAAGGTACCTTAGAGGAAAATCATACTGCTCGTGACAGCATCAGGTCGCTGGCAGCGGAGATCGATGATATTGCGATCAGCTACAGAAATAACCTGGGTCAGAGTAACCAACACGATTGGAGCAAATTATCCATGGCAAAGGCGATTAAAAGTGTGATCAACCGTGAAATGGGTACCAGAAAAGCTTCTGAAACTTACAGTGTTCCACGCTCTTCCTTGCAACGAAGAATTTGTGCCTACCGGTTAAATTCAGACATGGAATTGGCTGTTAGTAAAGATCTGGGCAGATTCCAAGCTGTATTTACTCAGGCGCAAGGGCTGGAGTTGGTGCGATACCTCAAAGAACAAGCCGCTCGACTTCACGGTCTTACCCGGACGGAACTGGCAATCCTAGTCCAGCAGCTTGCCGAGAAAAATGGCATAAGATTGATTGAAGGGGTTCATGATACGCTATAA
- Protein Sequence
- MRKTKCAGPACYVAIDDEVVGIPTDHVSDEEVLLQAANCDNSEMVPAPHIADYERTEALAETNVRTEGTLEENHTARDSIRSLAAEIDDIAISYRNNLGQSNQHDWSKLSMAKAIKSVINREMGTRKASETYSVPRSSLQRRICAYRLNSDMELAVSKDLGRFQAVFTQAQGLELVRYLKEQAARLHGLTRTELAILVQQLAEKNGIRLIEGVHDTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -