Basic Information

Gene Symbol
nfxl1
Assembly
GCA_963920795.1
Location
OY987204.1:5136451-5147251[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.16 3.2e+03 -0.6 0.4 4 10 197 203 196 203 0.96
2 15 5.1e-08 0.001 20.1 16.6 1 19 211 228 211 228 0.99
3 15 7.5e-06 0.15 13.2 17.2 1 19 264 283 264 283 0.97
4 15 2 4.1e+04 -4.4 1.8 6 10 308 312 307 312 0.89
5 15 1.1e-09 2.3e-05 25.5 12.1 1 19 318 336 318 336 0.99
6 15 3.5e-07 0.0072 17.5 14.8 1 18 371 388 371 389 0.97
7 15 7.7e-05 1.6 10.0 15.1 2 18 424 440 423 441 0.91
8 15 3.7e-08 0.00075 20.6 12.1 3 18 452 467 450 468 0.91
9 15 0.4 8.2e+03 -1.9 2.1 5 10 496 501 496 501 0.93
10 15 0.28 5.6e+03 -1.4 6.3 10 19 515 524 512 524 0.90
11 15 0.016 3.2e+02 2.6 4.9 3 12 537 546 527 546 0.85
12 15 1 2e+04 -3.1 0.7 6 10 607 611 606 611 0.90
13 15 1e-06 0.02 16.0 6.6 1 11 617 627 617 628 0.96
14 15 0.013 2.6e+02 2.9 11.9 3 18 657 672 656 673 0.91
15 15 4e-06 0.082 14.1 13.2 1 16 724 738 724 744 0.87

Sequence Information

Coding Sequence
ATGCCAGCTGAAGTGAAAAAACCAAAGAATAATAAGAGTCATAAGAAACTCGAAAATGCTAACCAATtggcaattaaaaaattcgaggAGGtccaaaatagaaatattgaaaaagccAAAGCTTACACGGGGAATTATAGTTCAAGCTCAGACGAGGAGGAAGAATTGAACACCGGCTATATTCTAGATAAACTATTCAGGGGGTATTCCGGTGAGCGGAGTCAACTTTCTAAGACTGAAATTTTCTTAGAGAACTTCTTACAATCTGGATCAGCTATTTGCCTAATTTGCATTGGGACTGTCAAGCGAAACGAGTCTATTTGGTCCTGTAAGAgctgcttttgttttttccaccTCCAGTGTATCAAACGCTGGGGCAATGATTCCATTTCTCAGCAGAAGTGCAGCCTAAATGAAGAGCAGAGCTATTATAACAATTTGGGAGAATACGTTTCTAAGAAAGTGAAGGCAATTAGGTGGCATTGCCCTAAGTGCCGGAAGGAGTACAACCCCGAAGATATTCCCAAAATATACACTTGCTTCTGCGAGAAGGAAATCAATCCCAATCCTCATCCATGGACAATTCCTCATTCGTGCGGAGAGCTATGTGAAAAGTATCTTGTACCTGACTGTGGACACAGGTGTCTCCTCCTCTGCCATCctggACCATGTCCGCCTTGCCCGCAGAGTGTTTTCACTTCTTGTAAATGTGGACAATCTAAACCGAAGTCTATCAGATGTTTCCAGAAGACATGGACATGCGACTTCAAATGCCAAAGCTTTTTAGCTTGCGGGATTCACAGATGTGGTAAAGGGTGCCACAGTCCAGGAGAGTGTCCGCCTTGCACAAAAAAGAGTAAACAGAGATGCCAATGTGGAGCAGAAATTTGTGAAAGAAGTTGTTCCGAATTATTATGGCAGTGTAAGAAGGTCTGCAATAAACCTTACGGCTGTGGTGTACATAAATGCAAAGAAATTTGTCACTCTGGTGATTGTAGAAGTTGCCCATTAGGACTTCCAAGATCTTGTCCATGTGGAAAAactaaaagcaTTGCACCATGCAGTGAGGTCATAGATACTTGTGGAGATACATGCCAAAAACTTTTGGCTTGTGGGCTCCACCACTGTGCACAAAGATGTCACAAGGGAGAATGCAGTCCATGTCTGACcttgatagaaaagaaatgcCGTTGTGGACTTCGGACAAAGCAACAGCCATGCTCTCGGTTGTTTACCTGTGAAACAAAGTGTAAGCAAATGAGAGATTGTCGAAAGCATATGTGCAACAAGAAaTGCTGTGACGGCCAATGTCCACCCTGCGacaaaatatgttcaaaaaCTCTTTCatgtaaaaaacataaatgtaAGTCTGTCTGCCACGATGGTCCTTGTTATCCATGTGATTTAAAATCGCAAGTTAAATGTCGATGCAGCTATACATCGATAACAGTGCCCTGTGGAAGGGAGAAAAAGACTCGTCCTCCAAAATGTCAACAGCCTTGCAGattTCCTTCAAAATGTCACCACCAAAATCCTCATAATTGTCACCTATACGAGTGTCCACCATGCACGCAAACGTGTGGCCTAAAAAACGATGTATCCAACTGTGAACATCCTTGTGAAGCTAAGTGCCACGATGCAGTAAAAGTTACAATAAACACTAACAATCAAAAACCAGTTACTATTTGGGACTGGAACATGGAGAAAtttgaaataaaaaagatgcCGCATCCACGATGTGTAGTTAAAGTAATGGTAACATGTATTGGAGGTCATGAGACAGCCCTTTGGCCCTGTTGGAACTCAAAGCCTAGCTCTTGTGAGAGGATATGCGGGCGAGTTTTGAAATGCGGTAATCACACTTGCCAGCGAATTTGTCATGCTCTTCCTAATATAGAggataaaaatGAACAAGAAGGCTGCATTCCTTGCGAGCAAGAATGTTATATACCAAGGGCTGGTGGATGTACTCATCCATGTCGAAAACGTTGCCATTTAGCACCGTGCGCACCTTGTCTGGTTACTATCAAGACAAATTGTCATTGTGGCCTTGGTCAAGTCTACTACAAGTGTTCTGAATACAATAGAGCAGATCTCGATCCTCACTCATTGGAAATATTTCGTAACCAACTTAAAAACTGTGGAAACCGATGTATTAAGAATTACGCTTGTGGGCATCGATGTACATCGACATGTCATGCAGGTGAATGTCCCGATCCAGaaaaatgcaagaaaaaagttaaaatttactgtaaatgtaaaaacttGAAAGCAGAAATTAGTTGCGAAAAGCATCGTAATGGATTCGCTTTTATTCCTTGTGACGATGTTTGTACTCAAAAGATGAAAACTGAAGAACGAATTAAGCGAGAGGCAGAGGAAAAACAACGAAAATTAGAAGAGGAGAAAAATCGTTTGGAATTGGaacaattcgaaaaaaaatttggaaaaaaaaagcacCGCGAACGCAAGATCTTGGAGGAAACTCCAAAAGAAAGAAGTTTCAAACTGCTCTGGGCAGTATCCGACTCGGACCACTCTTCTTACCTTGCTATATCTTCTCTCTTTTCCGAACGCTGCGATTCTCTCTACAACGAATACCTGGATCGCATGCAATACAAGCTTATCTCCGACCCTAAGCAATTCTATAATTTCATCAATACTAAAACCAAGTCCAATGGTTACCCATTAACCCTCAAACTCGGAGATTCTTCATCTTCTGACCCTACTGCCATCGCCAACCTTTTCGCTGAGTTCTTCAGTAAATCCTTCAACGATCCTGCTCCGGACCCCGATCTcaactatttttctttcttgcgCAATTGCTCCCAAACCTCCTTTTCATCTATTCACATTGATGCTTCTCTTGTTGCTGCCAAGATCACCTCTCTCACTCCCGATTTCAACCCTGGCCCTGATGGTATCCCCGCCATTATCCTAAAAAAATGCTCCGATCACCTGACCCAACCTCTTTCTACTCTTTTCTCGCTTTCTCTTTCTGAAGGGGTCTTCCCCTCTTTTTGGaaagattcttttattatcCTTATCCACAAAAAAGGTTGCAAAGGCGATGTTTCAAACTACCGCCCCATTGCTAAACTCTCCTGTATTCCCAAACTTTTCGAAAGCATAATCTACGACTCCTTGTCCTTCCACTGTAAACCCCTTCTTTCGCCAGCCCAACACGGTTTTTTCAAAGGCAGGTCCACAACCACTAATTTAACAGTCTTCGTGTCTCGTACTCTTCAAGCTATGGAAAACGGGGTTGAGACCGACGTTATCGCTACTGACTTTAGTAAAGCCTTTGACAAAATCTCCCATCAAATCATCGTCCTCAAACTTAACATCCTTGGCTTCCAACCCCACTTTATCTCCTGGATCAAATCTTACCTTGATAATCGAAATTATAGGGTTCGTTTCGATTCAGCGGTTTCTACCCCTTTTACATCTCACACAGCCGTCCCGCAAGGTAGTCACCTTGGCCCATTGATCTTCATTCTGTCCATAAACGATGTTGAGTTGGTAATTAAGCACTCAAATGTTCTAATTTATGCCGATGATATGAAGATCTTTAAAAGTATCTACAACCCATCCGACTCCTTGCTCCTTCAAGACGACCTCAACAGCTTTTCCACTTGGTGCCAGAAAAACTCTCTGGATTTGAACATTTCCAAGTGCCAATCTATTACCTACTCCCGTAAACGTCTCCCCTCTAGTCCCCGGGTTTATAATCTTTCTGGACAACCCATTCCTTCTGTCAGTTCCTTACGCGACCTGGGAGTTATCTGTGATAGCGAACTCAATTTCCGCTCCCATATCGATCACATCGTTAATAAAGCCAATTCTGCTTTAGGCTTTGTAAAACGATGGTCCAAGGAATTCTCAAATCCCTATGTCACAAAAGCTCTCTACTTCTGCTTCGTGAGGCCTCTACTTGAATACGCCAGTCAGGTCTGGGCACCCTCGCAGCCAACACTCATAAGCAGAATTGAAGCCGTTCAGCGTAGGTTCCTCCGCTTTGCGCTACGTGGCCTTCCTTGGGTCGATAACCTTAATCTCCCCCCTTATGAGAATCGCTTGAAATTGATTGACCTCCAGCCTCTATCCAATCGCCGCGATGTCGCTGATATTATCTTTATCCATCAAATTCTGTCCGGCTCCATCGACTGTCCTGCACTTTTAAGCACCATCTCCCTCTACACCAATCCGCGCAACGTAAGATCCTATCCTCTCTTTCGCCTAGATACTCACCGCACCAATTACGGTCACTTTGAACCCATTACCCGAATGCTACGCAAAGTCAACAATTCCGCCTCCTTCGACTTTCACGTAGACAAAGACACTCTTAGACATGACCCCTTCAACCCTGTTCTTCCTTCCCAGTCTTCCCTTTCTTAG
Protein Sequence
MPAEVKKPKNNKSHKKLENANQLAIKKFEEVQNRNIEKAKAYTGNYSSSSDEEEELNTGYILDKLFRGYSGERSQLSKTEIFLENFLQSGSAICLICIGTVKRNESIWSCKSCFCFFHLQCIKRWGNDSISQQKCSLNEEQSYYNNLGEYVSKKVKAIRWHCPKCRKEYNPEDIPKIYTCFCEKEINPNPHPWTIPHSCGELCEKYLVPDCGHRCLLLCHPGPCPPCPQSVFTSCKCGQSKPKSIRCFQKTWTCDFKCQSFLACGIHRCGKGCHSPGECPPCTKKSKQRCQCGAEICERSCSELLWQCKKVCNKPYGCGVHKCKEICHSGDCRSCPLGLPRSCPCGKTKSIAPCSEVIDTCGDTCQKLLACGLHHCAQRCHKGECSPCLTLIEKKCRCGLRTKQQPCSRLFTCETKCKQMRDCRKHMCNKKCCDGQCPPCDKICSKTLSCKKHKCKSVCHDGPCYPCDLKSQVKCRCSYTSITVPCGREKKTRPPKCQQPCRFPSKCHHQNPHNCHLYECPPCTQTCGLKNDVSNCEHPCEAKCHDAVKVTINTNNQKPVTIWDWNMEKFEIKKMPHPRCVVKVMVTCIGGHETALWPCWNSKPSSCERICGRVLKCGNHTCQRICHALPNIEDKNEQEGCIPCEQECYIPRAGGCTHPCRKRCHLAPCAPCLVTIKTNCHCGLGQVYYKCSEYNRADLDPHSLEIFRNQLKNCGNRCIKNYACGHRCTSTCHAGECPDPEKCKKKVKIYCKCKNLKAEISCEKHRNGFAFIPCDDVCTQKMKTEERIKREAEEKQRKLEEEKNRLELEQFEKKFGKKKHRERKILEETPKERSFKLLWAVSDSDHSSYLAISSLFSERCDSLYNEYLDRMQYKLISDPKQFYNFINTKTKSNGYPLTLKLGDSSSSDPTAIANLFAEFFSKSFNDPAPDPDLNYFSFLRNCSQTSFSSIHIDASLVAAKITSLTPDFNPGPDGIPAIILKKCSDHLTQPLSTLFSLSLSEGVFPSFWKDSFIILIHKKGCKGDVSNYRPIAKLSCIPKLFESIIYDSLSFHCKPLLSPAQHGFFKGRSTTTNLTVFVSRTLQAMENGVETDVIATDFSKAFDKISHQIIVLKLNILGFQPHFISWIKSYLDNRNYRVRFDSAVSTPFTSHTAVPQGSHLGPLIFILSINDVELVIKHSNVLIYADDMKIFKSIYNPSDSLLLQDDLNSFSTWCQKNSLDLNISKCQSITYSRKRLPSSPRVYNLSGQPIPSVSSLRDLGVICDSELNFRSHIDHIVNKANSALGFVKRWSKEFSNPYVTKALYFCFVRPLLEYASQVWAPSQPTLISRIEAVQRRFLRFALRGLPWVDNLNLPPYENRLKLIDLQPLSNRRDVADIIFIHQILSGSIDCPALLSTISLYTNPRNVRSYPLFRLDTHRTNYGHFEPITRMLRKVNNSASFDFHVDKDTLRHDPFNPVLPSQSSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-