Basic Information

Gene Symbol
zfh2
Assembly
GCA_963920795.1
Location
OY987210.1:2052920-2075495[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.00015 0.025 16.1 1.4 2 23 238 260 237 260 0.96
2 10 3.8e-05 0.0062 18.1 0.7 1 23 292 316 292 316 0.92
3 10 0.013 2.2 10.1 0.1 3 23 604 625 602 625 0.92
4 10 0.75 1.2e+02 4.5 0.4 1 21 668 688 668 692 0.91
5 10 5.4 8.9e+02 1.8 1.5 1 23 700 725 700 725 0.93
6 10 0.0018 0.3 12.8 2.3 1 23 738 760 738 760 0.96
7 10 0.00014 0.023 16.2 2.1 2 23 767 789 766 789 0.94
8 10 0.0059 0.96 11.2 0.1 1 23 963 987 963 987 0.93
9 10 1.1 1.8e+02 4.0 4.0 1 19 1093 1111 1093 1116 0.91
10 10 0.00021 0.034 15.7 0.3 2 23 2113 2135 2112 2135 0.97

Sequence Information

Coding Sequence
ATGCATTCAACAACATCAACAATTACAACAGCAATCCCatcaacaataaataataccGAAATGACTGCTGTTTCATCTCTGACATCGGCCGTTTCAACAACATCGTctacaataaaaacaactagCTGCAGTGCGACAAGCAGCGTTGGTGAATAcctgcagcagcagcagcaaatTCATCACCATCAGGCGAGAACATCAACACCATCATCAATGGTATTAACAAGCCCATCATCGACTGGTGTTGGTGTATTACCACCGAACAGTTGTACATCAACAACTGGTGCCAGTAATGATTTAATTGGTAGCAGTAATTGTAGTAATAGTGCTAAGTTATTAAATGAGTTCcttcaacaacaacaacagcaatttcaacaacaacagcagcagcaacaacaccAACAATTACAATGCCCTGAACATCAGGGTATTAAAGGTGTTGATTGTAAAACATGCGAACTGATTAATATTAATCTTAAATCACCAATGACACCAACAAAATCTCCAAATAGTATTAATTTAACGCCACCATCATCGAATTTAACGATGTCACCAACAACACCAGCGCCTAGCTTTACAATTGGCGCATGTCCAGAGCACATAAATGGCCGGCCAATTGGTGTTGATTGTGccagATGtgaaatgattttgaattcaGCGCGATTAAATAGCGGCGTGCAAATATCAACGCGCAATTCTTGTAAAACGCTTAAATGTCCTCAATGCAATTGGCACTATAAATATCAGGAGACTTTGGAAATTCATATGAGGGAAAAACACCCGGACGGTGAAAGTGCGTGTGGATATTGTTTAGCAggTCAACAACATCCGAGACTGGCGCGTGGAGAGTCTTATACCTGCGGATATAAGCCGTATCGTtgtgaaatttgcaattattcaACAACGACCAAGGGCAATTTGTCCATACATATGCAAAGTGATAAACATTTGAATAATATGCAAGAACTGAACAATTCCCAAAATATGAGCAATCAAAATGAGATCCGGGAAagtccaaaaataataatgccaAATATGACGCAACAGTCAAATAAGCCGAAACCAAGCTTTCGCTGTGATGTATGTTCCTATGAGACGAGTGTCGCACAAGCAGCATTAGCCGATTTAGCATATAATCAAGCGCTAATGATACAATTATTACATCAAAATTCTGCTGCTGGTGCATTGGGTGCAGCGGCGGCAGCATCAGCTGCAGCCGCAGCAGCAGCTGCCGTAAATTCAGTGCCACAGCCGCCAGCACCGACATCGCAACAAAGTTCATCAACATCAACTGTTGCCGCTGTTGCATCATCAGCTGCAGCAGCAAATGCCCTATTAAATAGTGCCCTAGAGCCCGATCAAGGTCTAAATCCGGACACATTTGAGCCACCAATTGATCCAGATCCACGTCCAACATCGATCTACAGTTGCCTCATTTGTTCAACATACAACACAAATATCATTGACGAACTGAACAACCACCTCATGACTGATAGATCTCGCAGCAACAACAACTGCAACAATAGTGATTATATAACGATACCAACAAATCCTGCTGCATTGCAGGCATTTCAAGCGGCTGTTGCAGCTGCAGCAGCCGCTGTTGCAGCGAATGCAACTAATAAACAAACAGAGCCTTCGTCATCATCGTCTCCGGTATCCGGGGGTAATCCGAATGTAACAAGTAGCAGTAGCAATTATGAGGAAATAAAATCGGAAAGGATCGATGCTGAATCGGAATCTGGGGGCGATTGTTACGAGCATGATCAGCATGATGTTGAAAATCCAGAAGAATGTATGAGCATAATTTGTCCATTATGCCAGGataatttttcagataaaaaatcattagagAAACATGTTATGGGGGTGCATAGCGTAAACAGTGATGGTTTAACGCGTCTACTCCATCTGGTGGATACTAGTCATTGGCTAAATAGCTCAACAAAAAAGAGTCCCGATCACAGTTCAACATCGGAACAGTGTCTAACAAATTGTGACTATGAATGTGTACAGTGTgggataaatttaaaatcccaTCAGGAGCTATTAATGCACACTAGTGAAATGCAACACtatcaaattataaatgatcAGTATCAATGTTTGCTAAAACAGTGTCAGCAACTTTTTAGCAGTCTAACAACAATGCTAACACATTATAAAGATACCCACATGAATATTGTGATTTCTGAGAGGCATGTATACAAATATCGTTGCAAACAGTGCTCACTTGCATTTAAGAcacaagaaaaattgaataccCATTCTTTGTATCATACAATGAGAGATGCAACTAAATGCATGATATGCAATCGCAGCTTCCGTACAACGCAATCACTTCAAAAGCATATGGAACAATCACATCCTCAAAATACACCGAATAGTCCAACATTATCACCGAACAGTACCGGAGATCATGGTGAAAATAAGCATACAACTCATGTTGAAGAATACATAACATCACCAACATCGAGCATAAAACAAGAAGATAATGATTCGGttacaacaacagcaacagctcaagatttaattttacgtgatGAAATTCAACATAATTTGGGTGAGACTGAAACAACTGATTTGGATGAATTTCTAAACGCTCAGCCATTAgctgaagaaaattataacgaCAATAATCGAAAATATAACGTTTCCCACCTGCATAAACTTAAAAAGCAAAGCGAAAATAACAACACACCATCAACATCACCGACCAGTAATATTTTAGGATCAAACGATTGTGATCGAAAAAGTATTGAATTTGATCGACGTAGCAATGAATATGATCGAAAATCAGTCGATTTAGAAATTGAAGGGAATATTATCGATCAACAAAAACGTAAATTAAGTCCAGAAAGTGACTACGATAGTCCAAAAAAGCGTTTTAAATGCGATATTTGTAAAGTTGCATATGCTCAAGGTAGCACACTTGATATACACATGAGAAGTGTTTTACATCAAACAAGGGCATGTCGTTTACAAGAGCAACAATCCCAGCAACTtcagcaacaacagcaacaaaatACACCACAAACACAGCAACAATCTGTTAGCCCTAGTTTGGCTAGAATTAATGAATTAGCCCAACAGCAGCAGAGCATAAGTCCTACACCATCAAATTTAAGCAGTTGCTTACAGGACGATACAATTCCAAAATTCAACaatcaaatatataaaacgcTTCTCGAAAATTTTGGTTTCGATATTGTAAAACagtttaatgaaataaataagcaCAGCACCGAACTGGGCAGAGAGATAACAGAGGATAAATATTATTGCCGACACTGTAAAAAGATATTCTCTTCAATATTTGTGCTTAAATCGCACTGTGAGGAAAttcataatgaaaaaattcctcttgaaattctcgaaaaatttgctgaaaaatttaaaaattactatctTGATGCGACCGAAAATgagaatgaaattttggatttttcaaaaaagccATCTTCAAGTTCACCATCACCGACATCATCTTCGACTGGACTAGGACCTTGTGGTAGTGGAAATTTAAAGGATGAAAAAATCGAACCGACTGGAACTCCACAATCTTTGGGACCACAAAGTGTACCATCACCAACTCCACCATCCCCTCTGCCACAAGCCCGATCAATTACACCACAACCGATGCAATCACAAACATCTCAAAATATCCCCCAATTACCACCAGTTGCAGCCGCATCAGTTGCATCAGCCCTGCTaaaacagcaacaacagcagcagcagcagcagcaacagcagcagcaacagcattCAACCCCCCAAACCCCTGTAATGCCAGATCTCGCCCAAAAATTGAACATTGATCCAACAATTCTTGcccaaaaaattatggaacaaaatttagcaaattttccaccaaattttgctaatttaccacaaaatttacaaagcttacaaaatttacaaagtttgcaaagtttacaaaatttacaaaatttaccaAGTATGGGAAATTTATCGTTAAACACACTCGATATGCtcaatttaatgcaatttcatCATTTAATGTCGCTAAACTTTATGAATTTGGCACCGCCATTAATTTTTGGTGCAACTGGagctgcagcagcagcagctgTAGCTGGTAATGTACCACCAGTTACACCAGAACTTCCTGTTCCAGGACAACCCGTTCAATTACTTCAACAGCAAGCAGCTGCAGCGGCTcagGCGACTAGTAATCAAAAACGAGCAAGAACTCGTATCACTGACGAACAACTGAAAATTCTTCGAGCTCATttcgatatcaataattcCCCAAGTGAGGAAAGTATCATGGAAATGTCAAAAAAGGCCAATCTTCCCATGAAGGTGGTGAAGCATTGGTTCCGGAACACCCTGTTCAAGGAGCGTCAACGTAACAAAGACTCACCCTACAATTTCAATAATCCACCATCCACAACCCTCAATTTGGAGGAGTATGAGCGAACTGGTCAAGCGAAAGTTACCCCTTTAGTGGATACAAATGAGAACAGCAACACACAATCAtcgcagcagcaacagcagcagcaacaacagtCACAGCAACAGACGCAGTCACAGCAACAGCCACAGCAGCAGCAAAGTATGAGGCAGCAactgcagcagcagcagcaaatTCATGATCAAGGGGCACCCCTCCACctccagcagcagcagcagcaagtccaacagcagcagcaacagctgACGCAGTTGAGCATGCAGCAAATCCAGCAAGAGCAGCTGCGACAGCAGACACAGCAGCGTGAACATCAGCAACAAAATCAGCAAGATAATCGGCCACTTTCTCAGCCGTCGAGTGTTGCCAGCGATCGGGCAGATGTTCACATAAAATCAGAGCCTGGCGATGACATGGGCAATTCAGACACGGACAGTCACATGATGAAACATGATCAGGATcatgaacaaaatttaatgcaatcCCAACAtcagcaaaatatattttacaataattttgaaacaaaatcagAGAGCGCACAAATTGCAGCTGCTCAAATAGCGCAGAGTTTAAGTAGCGAAGATTCAAATTCGAGCATCGacataaataatgcaaatttgtTAACATCAAATTTGGCTGCACAACAAGCCGCagcggctgctgctgctgctgctgcagcaGCTGCAGCAGCAATTGGTGGTATTAATCCggtaacaaatttaaatttatcagcATCACCATCAGCAGCATCGAATACATCAATTTCGGGTGGAAATATCCCACCAATTCCTGGTATTTCAACAAGTCCTGGATTAAATCTTCTCGCATCCCCGCACAGCCTGTTTaagcagcaacagcaacaaaatTCTGGTTTAACTGGATGCGGAAGTGGCGCAACTCAGTCCCATGCAAGCCCATCAcagcaaaaatttgaatgcgataaatTCCCAGGATCAGTTGGTGGTGATCTTATTTTGGGCGGGAATGTACCAAGTTCTGTAACGACATCTATTGATGGAACAGCAAAACCAagcattgaatttttacttcagTACTATCAATTAAATGAGTCAAAGAAGTTTTTTCAGTTAGATGCCTCGCCCCAACAAATTCATGATTTTCCATTGCTCAATTTAACAACGAGTGGAGCCAGTGggaacaacaacagcagcagcaacaccAACAGCAGTGGCTGCAATATTGGCGGTAACAGCAACACTCAGGCGACAACACACAacacaacaacagcagcagcagcagcaacagcagctgCAGTCGCAGCAGCTGCAACGCTTTTAGCAGCTGGTGGGGGCGGGGTAACAACACAACAAgggcaacaacaacagcaacaacaccaacaacaacagcaacatcAAACAGTTCAACaacatacaaaattatgtGGCAGCAACAGCAATGGTAGTACTgccgaaattcaaaattcaacattaAATCCAACTAGAAGCGGTCTTACAATGGCCTCACAATTGGCtgttacattaaaaaataataaaaattttatatcatcaACTGTTCCACAAAATATCCCAGCATCACCAACACAAACAACAACTGCACCAAATTCATTGATGATTACCGatacaaattgtttaaatagtTCAACAATTTCGGCAAGTTTGGGCGGAACTAATTCTGGTGGGGAGCATACTCAAAgtactgaaaaacaaaataataaacgccTACGCACCACCATTTTACcagaacaattaaattttttatatgaatgcTACCAAAATGAATCGAATCCAAGCAGAAAGATGCTCGAAGAAATATCGAAGAAGGTCAACTTGAAGAAGCGCGTTGTTCAGGTGTGGTATCAAAATTCTCGGGCGCGCGAAAGAAAAGGGCAATTTcgtcaaaatttgcaaataattaataaaaagtgtcCGTACTGTggtgcaatatttaaaataaaatcagccCTCGAATCGCATCTACAATCAAAACATCCCGATAAGCAGCCAATTAATATCGATCAAATTCCGGATGTTAAACCGATCGAAGGTCTACCATCGTTTGGACACGGAGGTGTCGCCAATCCCGGAAATTCTGGATCAGCTGGAACAAATTCCATCCCGTCATCGTCTTCAATAACGAACCTGTCCACGATGAACATCGCCTCCTCGTATGGTGGTTTTAATACCGGAAATAATGGAACCAGCAACGAGAACGGCTcagatattcaaaaaatggACAGCAACGATTCGATGGTATCAGCATTGGCCCCAAATACCAGCACTTTGGCATCGTTGATAGAGACATCTGGCGGCGGCGGTTTGCAGAACTTGACCAGCTGCATGCCTAAAGGTGGATTACCCCTGGATCTTAGCAAAAACACCCCTAAATACGAGCCGAGCGAAAGTGAAATCAGTTTTTCAGATTCGAACAACGATCACGAGGAAtcgaatgatttttttataacatccTCATCGATCGGAGCACCGGGCGTTAATAACAACAATAAGGGCGACAGTAGCCTACCAAATTTCGGTAATTCAAATACCACAGCCGGCCACAGTAACAATGGCAGCCAacataataacaataatgaattattttgcgATTCCGATATTATGCCATCAATGGGAcggaataaaatttcatcggGACTCGGTGATACCTCCGGTGGTGGCATCATGTTTTCTGGTACCAGTTCCGGTGATCGTGACAACACAATTTCACCAGTTAGCCCAGCATCCAGCACCCAGAGTACCCAAAAGAAGCGATTTCGGACACAGATGAGCAATCTACAGGTGAAAATTTTGAGGGCCCTCTTCCTAGACGTTAAAACCCCCAGCATGACGGATTGCGAGAATATTGGACGGGAAATCGGCCTACCGAAACGTGTCGTACAGgtttggTTTCAAAATGCTCGcgcaaaagagaaaaaaagtcgaaataatcgatttattgatgaaaatattgataattctGAATTATCATCAGATTTAATACCAACACCGGAAGATTgcaaattatgtaatatacaaaaagtGAATATACAAGAGCATGTATTTTCAGCATCACATATCGCTCAAGTGCGACATATGCTTGAATCGAATGATATTGgtggaaattataatttatctgGATCAAATGGTAATTTAACCGATACATGTGATCAAAATGATCATCAAATTCTATCAAAATCCAGTCCGCCACCACCCCCAATTATGCAAATATCTGGTGCTATAAATtcatcatcgtcatcatcAACACCAACAGCTGTTAATTCATCTGCGAAAATTTCACATCAAGTTCCTGGAAGTGATCAGGATTCGTTTAAAatgtacaataaattttttttgcataattcaatatttatgaatCAATCACAATTGACTGGTGGAAATTCACAGAATGGCACCAATAAATATTGTGAACGAAATGGGGGTGGTAGTGGAAATAATGGTGATGGTGATTTATGCTCCTCCCCCGATCGCAGCTTGATTATCCATcaaaataattctgaaaattgtgATGGTCCCGAAATCAATCCCAACAGTGTCAATAACGAAAATGGCCTAATCCACGATGATGGTTCACCAACAGCGGCATCTGCCATCATGAATTTGAACCATCTTCAACAACATTTGGTTGCCGttcaacaacaacagcagcagcagcaacaccAACACCAGCAGGATGGCACCAGCAATTCAGCTGTGGCTGCTGCTGCAGCGGCTGCTGCTGCTCATCAAATGTTGatggaaaataatttgctgCTTCAAATCAACACCGAAAATAATGCGATGGCCTCGAACAATTCGGAGATTCTACAACAACTTTACAACTACAGCCAGATGAGTGGTGAGTtgattaagtaa
Protein Sequence
MHSTTSTITTAIPSTINNTEMTAVSSLTSAVSTTSSTIKTTSCSATSSVGEYLQQQQQIHHHQARTSTPSSMVLTSPSSTGVGVLPPNSCTSTTGASNDLIGSSNCSNSAKLLNEFLQQQQQQFQQQQQQQQHQQLQCPEHQGIKGVDCKTCELININLKSPMTPTKSPNSINLTPPSSNLTMSPTTPAPSFTIGACPEHINGRPIGVDCARCEMILNSARLNSGVQISTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYTCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNNSQNMSNQNEIRESPKIIMPNMTQQSNKPKPSFRCDVCSYETSVAQAALADLAYNQALMIQLLHQNSAAGALGAAAAASAAAAAAAAVNSVPQPPAPTSQQSSSTSTVAAVASSAAAANALLNSALEPDQGLNPDTFEPPIDPDPRPTSIYSCLICSTYNTNIIDELNNHLMTDRSRSNNNCNNSDYITIPTNPAALQAFQAAVAAAAAAVAANATNKQTEPSSSSSPVSGGNPNVTSSSSNYEEIKSERIDAESESGGDCYEHDQHDVENPEECMSIICPLCQDNFSDKKSLEKHVMGVHSVNSDGLTRLLHLVDTSHWLNSSTKKSPDHSSTSEQCLTNCDYECVQCGINLKSHQELLMHTSEMQHYQIINDQYQCLLKQCQQLFSSLTTMLTHYKDTHMNIVISERHVYKYRCKQCSLAFKTQEKLNTHSLYHTMRDATKCMICNRSFRTTQSLQKHMEQSHPQNTPNSPTLSPNSTGDHGENKHTTHVEEYITSPTSSIKQEDNDSVTTTATAQDLILRDEIQHNLGETETTDLDEFLNAQPLAEENYNDNNRKYNVSHLHKLKKQSENNNTPSTSPTSNILGSNDCDRKSIEFDRRSNEYDRKSVDLEIEGNIIDQQKRKLSPESDYDSPKKRFKCDICKVAYAQGSTLDIHMRSVLHQTRACRLQEQQSQQLQQQQQQNTPQTQQQSVSPSLARINELAQQQQSISPTPSNLSSCLQDDTIPKFNNQIYKTLLENFGFDIVKQFNEINKHSTELGREITEDKYYCRHCKKIFSSIFVLKSHCEEIHNEKIPLEILEKFAEKFKNYYLDATENENEILDFSKKPSSSSPSPTSSSTGLGPCGSGNLKDEKIEPTGTPQSLGPQSVPSPTPPSPLPQARSITPQPMQSQTSQNIPQLPPVAAASVASALLKQQQQQQQQQQQQQQQHSTPQTPVMPDLAQKLNIDPTILAQKIMEQNLANFPPNFANLPQNLQSLQNLQSLQSLQNLQNLPSMGNLSLNTLDMLNLMQFHHLMSLNFMNLAPPLIFGATGAAAAAAVAGNVPPVTPELPVPGQPVQLLQQQAAAAAQATSNQKRARTRITDEQLKILRAHFDINNSPSEESIMEMSKKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLVDTNENSNTQSSQQQQQQQQQSQQQTQSQQQPQQQQSMRQQLQQQQQIHDQGAPLHLQQQQQQVQQQQQQLTQLSMQQIQQEQLRQQTQQREHQQQNQQDNRPLSQPSSVASDRADVHIKSEPGDDMGNSDTDSHMMKHDQDHEQNLMQSQHQQNIFYNNFETKSESAQIAAAQIAQSLSSEDSNSSIDINNANLLTSNLAAQQAAAAAAAAAAAAAAAIGGINPVTNLNLSASPSAASNTSISGGNIPPIPGISTSPGLNLLASPHSLFKQQQQQNSGLTGCGSGATQSHASPSQQKFECDKFPGSVGGDLILGGNVPSSVTTSIDGTAKPSIEFLLQYYQLNESKKFFQLDASPQQIHDFPLLNLTTSGASGNNNSSSNTNSSGCNIGGNSNTQATTHNTTTAAAAATAAAVAAAATLLAAGGGGVTTQQGQQQQQQHQQQQQHQTVQQHTKLCGSNSNGSTAEIQNSTLNPTRSGLTMASQLAVTLKNNKNFISSTVPQNIPASPTQTTTAPNSLMITDTNCLNSSTISASLGGTNSGGEHTQSTEKQNNKRLRTTILPEQLNFLYECYQNESNPSRKMLEEISKKVNLKKRVVQVWYQNSRARERKGQFRQNLQIINKKCPYCGAIFKIKSALESHLQSKHPDKQPINIDQIPDVKPIEGLPSFGHGGVANPGNSGSAGTNSIPSSSSITNLSTMNIASSYGGFNTGNNGTSNENGSDIQKMDSNDSMVSALAPNTSTLASLIETSGGGGLQNLTSCMPKGGLPLDLSKNTPKYEPSESEISFSDSNNDHEESNDFFITSSSIGAPGVNNNNKGDSSLPNFGNSNTTAGHSNNGSQHNNNNELFCDSDIMPSMGRNKISSGLGDTSGGGIMFSGTSSGDRDNTISPVSPASSTQSTQKKRFRTQMSNLQVKILRALFLDVKTPSMTDCENIGREIGLPKRVVQVWFQNARAKEKKSRNNRFIDENIDNSELSSDLIPTPEDCKLCNIQKVNIQEHVFSASHIAQVRHMLESNDIGGNYNLSGSNGNLTDTCDQNDHQILSKSSPPPPPIMQISGAINSSSSSSTPTAVNSSAKISHQVPGSDQDSFKMYNKFFLHNSIFMNQSQLTGGNSQNGTNKYCERNGGGSGNNGDGDLCSSPDRSLIIHQNNSENCDGPEINPNSVNNENGLIHDDGSPTAASAIMNLNHLQQHLVAVQQQQQQQQHQHQQDGTSNSAVAAAAAAAAAHQMLMENNLLLQINTENNAMASNNSEILQQLYNYSQMSGELIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00717557;
90% Identity
iTF_00717557;
80% Identity
iTF_00717557;