Eruf006846.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- -
- Assembly
- GCA_963920795.1
- Location
- OY987204.1:58680595-58691205[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.024 4 9.2 1.3 1 23 671 693 671 693 0.95 2 13 1.4 2.2e+02 3.7 0.1 1 22 698 718 698 720 0.75 3 13 0.87 1.4e+02 4.3 0.1 2 11 726 735 725 737 0.87 4 13 6.6e-05 0.011 17.3 2.5 1 23 1004 1026 1004 1026 0.99 5 13 0.38 63 5.5 0.2 2 23 1032 1052 1032 1052 0.93 6 13 1.3 2.2e+02 3.8 0.1 2 23 1059 1080 1058 1080 0.93 7 13 0.36 59 5.5 0.2 1 23 1092 1115 1092 1115 0.95 8 13 0.00059 0.098 14.3 1.4 1 23 1123 1146 1123 1146 0.95 9 13 3.2e-05 0.0052 18.3 2.2 1 23 1157 1179 1157 1179 0.96 10 13 1.6e-06 0.00026 22.4 1.4 1 23 1185 1207 1185 1207 0.96 11 13 9.5e-06 0.0016 19.9 6.7 1 23 1213 1235 1213 1235 0.98 12 13 6.7e-05 0.011 17.3 3.1 1 23 1241 1263 1241 1263 0.98 13 13 0.11 18 7.1 2.9 1 23 1268 1291 1268 1291 0.97
Sequence Information
- Coding Sequence
- atgaAGTGTTCGGTGGCCCATTGTGCGAATAGCTACAAAAAGCGGAatggaaaatcatttttccgattcCCTAAGAACCCTGAATTGAGAAAGAAATGGCTGAGAGCAATTGCCCGTCAGGATTATGTACCAAAGGATAGAAATGTAATTTGCGAAGAACATTTCATGCCAAATGATATTGATAGATctatgaaaatgttcaaattattTAGGGGAGCGGTGCCTTCTGTGAACTTAACAAGAGTTGAGAAAGTCAGAGCTAGTACTGATGCTGCTCCAAAGAAAAGTATAATTCtgaaggaattaaaaattcctctAATTCGAGTAAGTACCAACACGGAGCCAGAACCTGAGCCCGAACTTGAGCCAGAACTTGAGCCAGAACTTGAGCCCGAACCTGAGCCTAAGCTTGAGCCCGAACCTGAGCCTGAGGTTGCTTTATTGCCAATTCAACATTCAGGGACAATAAAGCAAGGAGAATCGTGTGAAATAGAAAGCAACTGGCAGATTGAAAGGCCATTAAAtgtcaataaaatgaaatgtgaAGTGTTTTGCTGTCCAAACAAACGCAGAAAGACCCGgggaaaatcatttttcagATTTCCGCGGGACAAGGAAACCGTCGAGATCTGGTTGAAGGAAATCGGTAGAGTAGGAGCTGTGATAAATGATAACAGATTTGTGTGCGAGGACCACTTCGAGGAAACGTTTATCTTCCAGTGGAAAGACAGGAAAGTTATTGACAAGGAGGCGACACCTTTCCACGACTACAGGGCCTGCCCGATTTGTTCCGATCCCAATAAGGCGAGTGAAGAAGATATTCATCCGGTACGCAGGAAGCGGAACAAACCAGAGAAATCAAAAAAGGTGAAGTCGAATTCAAGAGATACATCTTCAAGTAACCCTAAATCAGATAATGTTGTGCTGGAAGCTTCCCAAGTTTTcgttaaagaagaaaatgagAATAATGTGACTTTCATTACATCTCTTGAGATCACCCCGCTGTCTTACATGGACATACCTGATCATAATACTGCTAATGATTTAGTAGCCAAAGAAGATCCTGAGAGTGCATTAAATACATCACTCGATTTAATGGATACATCTTTAACTGAATATCAAAATGTAGATGTATTAGCCGAGCATGAGATGGAAATTAAACAAGCAGAGCCCGCcggagaaaataaaatagcagaGAACTTCTTAGACCCAGATATAGAATGTTCGGCCAGTTCGTCAGAGTCTGAATCGATGAATTCCGTGGAGCGTGTAAAGGGAATCTGCAGAATTTGTTTGGCTAACTATTTCAAAGGACAGTCTATATTTTTGATCTATAAGAAGAAATACTTACCGCATATCGTTTATAACCTCACGGGAAATCTTCCAACGAGGGACGATGAACTTCCAGCAATGGTTTGCTTCACTTGTGCTGATCTACTTTTACAGGCGGAGGCTGCTAGGAAAAGGTGCATCTCTTCCGATAAGTTTTTAAGGAAAGAgttgcaaaagaaaaagaacGAGATGGAATCTGCAGAAATCATCGAGCCTCAGAACCAAAACATTCaaccaaatgaaaataatgttgCTAGTTCTCAAACTGTTACTACTTCTTCTATTCCTAATAAGAAAAGTTCTGTTAGCGTAGCTAAAGAGcacaattacataaatttcggaaaaaagaaggagaaaattaaggaaaccaaagttaagaaaactaaaacattaaaagctgaagacattttaaacataatagATGAGAGATTGGAAGATGAAGAAAGTCAAAACAAAACAGATAGTCCAAATATGAAAGAcgaaagtttaaatataacGGAATATGTCCCGAATATTAAAGAAGATCAATATCTTGAAGCACAATATTTGGATGACGCTGATGTCCTCTATGAAGAACTATTTTCAGAAACCAATGTACAATACAAAGAAGACGTTGAAGTGAGCCCCGAAAGTGCCAATCTCGATCCTCTGGGCATGGGAATTATTCTccctgaattatttttgtgtacTGTGTGTTCAAGAAAAATTCCGAGTTTAAGGGCTTTCAGACGCCACCAGAGATACCacaattctgaaaatttcaggtGCCCAATTTGTCCAGAGGAACTTACACCTGAAACGACTAAGGACCACCTTTATGCACACAAGGAAAGGGAAGAATTGATTTGCGGAGATTGTGGCAAGCATTTTGATGATATAatcgATAGTGACGATGAAAATTCAGCACATAAAACTTATGAAGAACACGGAAATGTAGCACAAAAGAACAGGTCATCGCCTCATAAAATGGCAAGTTGTGTGGAATATATACAGGGAAGCTGCAGGGTTTGTTTAACTAATTGTTTTAATGGTCAGtcgatttttaaatactataaGAAGAAATTTCTGCCCAACATCATTCTAATCCTCACGGGGATTCATGTGACTAAGGGTGATGAACTTCCATCAATGATTTGCTTTAGTTGTGCAAATCTACTGCTCCAGGCAGAAAGTATAAGAAACATGTGCCTAACCTCAGATAAGTTTTTGAAACACcaaaaagaattcaaaattaaaatggaaagtttTGATACCGATATCGAATATCCTTCAATTAACTTAGAAAGAGATACGAGCACCAATTTAACGCAAAATCAGAGCATGCCTGGTATTGATCATATGGAAGCCAATGCAATGAAAGAAGAAATCCAATCAGATATAGAAGTAAACGAAGAAGTTTTCCAAGATCAAGTTCATTGTGATGAAAGGTTTGAGAAAGTCGCCGAGGATTATTATCATAATGTGGAAAGACTATACAATGATATTGAAGATCAACATTATAATGAAGAAAGGTTGGAAGAGGAGAACGAAGATCAGTATCAAGATAAGGAAATATTAGATGAAGTAAAGCCAGATCAATTATCAGATGAGAAATATGATAACGAAGCATTTAGATTAAGCAGTGAATTTGGTAGCTTCGATGAGTGTGATGATATTGGTGGAAATGCTTTTGAAATCTTCGAATGCAGTATTTGCTCAAAGCAATTTgaggataaaaaattattcgatcGGCACCGGAGAACCCAcattcaaaagaaaagaaaatgtcctGTTTGTCCCAAAGAATTAACGTACAGAGCAATGAAACTACACCTTGCTACACACAaggaaatcaataaattaatctgTGATCAATGCGGAGATGTCTTCAACAATGTATTAATACTTTTCAAACACCTCAGAcaacataaaacaaatgttaaGGGGGATGCAACATATGTTTACAGATGCGATATATGCGAATATGAGAACATCGTTTTGTCAGCTTATCAGACCCATATGAAAAATGTGCACGGTTTAGAAGACCCCAAACCCTTCAAGTGCAAACAATGCCAAATGGGGTTCACTAGGAAAACGGCTATGTATCGGCATATAGATAACGTACACAACCAAAATCCTGCGAACcgaataagaaattttctcTGCAATATTTGCGGGAAAAATTTCTACGTGAAATTTCATCTAGATATCCATATGCGTTCGCATACTGGCGAACGTCCTCACAAATGTAAATATTGTGGAAAGGCTTTCACCCAACTCTCTGCTCTAAAAGCTCACGAATACATTCACACTGGCGAAAAACCTTATGCGTGCAAACATTGCGGAAAGAAGTTTAAGCAATACGGCCATCTGACGTACCATCAACAAACGCACGCGGAGGGCTTTCCCTATGTCTGCAAAATATGCAatcacaaattcaaaataagaacCAACTTAAACATCCACATGAAGCTTCATAGCAAGAAACAGTTTAGTTGTAAGATTTGCCAAAAAGCATACGTTTGGCCCTGTAAACTGAAAGAACACTTCCGAAAAAGCCATCCCGGTGTACAAGTATCGGAGTTAGAAGATACTTTAGCCCTTTTGGAAGAATCATGA
- Protein Sequence
- MKCSVAHCANSYKKRNGKSFFRFPKNPELRKKWLRAIARQDYVPKDRNVICEEHFMPNDIDRSMKMFKLFRGAVPSVNLTRVEKVRASTDAAPKKSIILKELKIPLIRVSTNTEPEPEPELEPELEPELEPEPEPKLEPEPEPEVALLPIQHSGTIKQGESCEIESNWQIERPLNVNKMKCEVFCCPNKRRKTRGKSFFRFPRDKETVEIWLKEIGRVGAVINDNRFVCEDHFEETFIFQWKDRKVIDKEATPFHDYRACPICSDPNKASEEDIHPVRRKRNKPEKSKKVKSNSRDTSSSNPKSDNVVLEASQVFVKEENENNVTFITSLEITPLSYMDIPDHNTANDLVAKEDPESALNTSLDLMDTSLTEYQNVDVLAEHEMEIKQAEPAGENKIAENFLDPDIECSASSSESESMNSVERVKGICRICLANYFKGQSIFLIYKKKYLPHIVYNLTGNLPTRDDELPAMVCFTCADLLLQAEAARKRCISSDKFLRKELQKKKNEMESAEIIEPQNQNIQPNENNVASSQTVTTSSIPNKKSSVSVAKEHNYINFGKKKEKIKETKVKKTKTLKAEDILNIIDERLEDEESQNKTDSPNMKDESLNITEYVPNIKEDQYLEAQYLDDADVLYEELFSETNVQYKEDVEVSPESANLDPLGMGIILPELFLCTVCSRKIPSLRAFRRHQRYHNSENFRCPICPEELTPETTKDHLYAHKEREELICGDCGKHFDDIIDSDDENSAHKTYEEHGNVAQKNRSSPHKMASCVEYIQGSCRVCLTNCFNGQSIFKYYKKKFLPNIILILTGIHVTKGDELPSMICFSCANLLLQAESIRNMCLTSDKFLKHQKEFKIKMESFDTDIEYPSINLERDTSTNLTQNQSMPGIDHMEANAMKEEIQSDIEVNEEVFQDQVHCDERFEKVAEDYYHNVERLYNDIEDQHYNEERLEEENEDQYQDKEILDEVKPDQLSDEKYDNEAFRLSSEFGSFDECDDIGGNAFEIFECSICSKQFEDKKLFDRHRRTHIQKKRKCPVCPKELTYRAMKLHLATHKEINKLICDQCGDVFNNVLILFKHLRQHKTNVKGDATYVYRCDICEYENIVLSAYQTHMKNVHGLEDPKPFKCKQCQMGFTRKTAMYRHIDNVHNQNPANRIRNFLCNICGKNFYVKFHLDIHMRSHTGERPHKCKYCGKAFTQLSALKAHEYIHTGEKPYACKHCGKKFKQYGHLTYHQQTHAEGFPYVCKICNHKFKIRTNLNIHMKLHSKKQFSCKICQKAYVWPCKLKEHFRKSHPGVQVSELEDTLALLEES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717843;
- 90% Identity
- iTF_00717843;
- 80% Identity
- iTF_00717843;