Basic Information

Insect: Eutolmus rufibarbis
Gene Symbol: -
Assembly: GCA_963920795.1
Location: OY987204.1:59840078-59841940[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 4.8e-05 0.0079 17.7 2.4 1 23 239 262 239 262 0.98

2 10 0.00022 0.037 15.6 0.3 1 23 268 290 268 290 0.99

3 10 2.5e-07 4.1e-05 24.9 0.9 3 23 299 319 298 319 0.99

4 10 9.8e-07 0.00016 23.0 0.9 1 23 325 347 325 347 0.98

5 10 0.0041 0.68 11.6 1.4 1 23 353 375 353 375 0.98

6 10 0.00022 0.036 15.6 3.9 1 23 381 404 381 404 0.96

7 10 0.0052 0.85 11.3 0.8 1 23 410 434 410 434 0.95

8 10 0.00017 0.029 16.0 0.3 3 23 442 462 440 462 0.97

9 10 0.00087 0.14 13.8 3.3 1 20 468 487 468 490 0.92

10 10 0.027 4.5 9.1 1.3 1 19 509 527 509 530 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	4.8e-05	0.0079	17.7	2.4	1	23	239	262	239	262	0.98
2	10	0.00022	0.037	15.6	0.3	1	23	268	290	268	290	0.99
3	10	2.5e-07	4.1e-05	24.9	0.9	3	23	299	319	298	319	0.99
4	10	9.8e-07	0.00016	23.0	0.9	1	23	325	347	325	347	0.98
5	10	0.0041	0.68	11.6	1.4	1	23	353	375	353	375	0.98
6	10	0.00022	0.036	15.6	3.9	1	23	381	404	381	404	0.96
7	10	0.0052	0.85	11.3	0.8	1	23	410	434	410	434	0.95
8	10	0.00017	0.029	16.0	0.3	3	23	442	462	440	462	0.97
9	10	0.00087	0.14	13.8	3.3	1	20	468	487	468	490	0.92
10	10	0.027	4.5	9.1	1.3	1	19	509	527	509	530	0.94

Sequence Information

Coding Sequence: ATGTGGAATTCCTTAAGTAACATTAATTTCTACGAGAACCTGTTGGACCAAAAGTGTAAGGCAAAAGAGCGCATTACTGAGAATGACGTAAATATCGCAAAGCTGTGCAGAACGTGCCTTCGGGAGGCACCCGACACGAACAACCTGCTGAAGGAATTCGAAATTGGGGCCATGAACATAAATCTGGACGGGAAGCTGTTGAAAATGATTGACATGATGGAGGAGTCGACCGGCTTAAAGGTGGAAGAGTCCGACTCCCTGCCCCATCAAATCTGTAGCAGCTGCTTCCAGAATTTGAGTGGGGCCTACTTCTTTCGGATGCAGGCCCACAAGGCAGAAAGGACCCTCATGAGGCTGCTGATCGCGCTGTCGGACAACGCAGAGCCCCCTTACGAAGATGTTCAGCACCTCGACGAAACGAGCTCCGATAACGCAATCGAAATTGCTTTGGAGGCTGAGGACGTTGATGCGACCCGCTGTGAGCtgatggaaataaaattcgacAGCGTTGAGTCTACAGAACTTATTTCAGAAGCTGTTATGGCCTGCGAGGATATCATAGAGAAGCCCCACGAAACGATTGAAGAGCTGAAGGTGGAATACATCGAGAAAACGGACGATGACGACTCGGAAGAGGTTGGAAGTGTTACGAACTTGGCGGTAGAAGGGGACAAGGAAGTCGTCGATGAGATCGATGAGACGTCGATAGAAGATTATAAATGCTCTGAGTGCGACGAGCACTTTGAACTAAAGAAGGCCCTCCACGAGCACATTCGGACTGCTCATCCAGCAGCTAAAGCCTTTAAGTGCGACATTTGCGACGCAAAACTAGGGAACGTCCAGACCCTTAAAAGACACATGAAGATCCACCAGACGGACCAGAAGAACAAATTGTGCACCTTTTGCGGGAAGAGATTCGCGCGGGCCGACGACTTGAAGAGGCATGTGAGGACGCACACGAACGAGCGGCCCTACGCCTGCTCCAAGTGCCCCAAAAGTTACAAGCAAACCTCGGAGCTGAAGGAGCACATGGACACGCACTCCCGGGATAAGTTATACAGCTGCGAGATTTGCGGAAAGTGTCTTTTAACCCGGAACGGATACTACGTCCACATGAAGGTCCATGCGGGGGTGAAAAATCATAAGTGCTTGGTTTGCGAGAAGTCGTTTGTCACGTCCGGGGAGCTCCATTCCCACGTGAGGCACATCCACGATAAAGAACGGCCATTCGCATGCACTTTTGAAAACTGCGACAGAAAGTTCGCTACGAAGCTGTCCTTTGATATCCACCAGCGAGCGCACACCGGAGAAAGGCCCTTCGGATGCACGATCTGTGGAAAGAAACTGGCCACGTCCTCCTCGCTGTCCGAGCACGTGAAGCTCCACACAGGAGCGAAGCGGTTCCACTGCAGCAAGTGCAACAGGACCTTCAACAGCGCGAGTTCCATAAAGAAGCACCTCCCCAGGCACGAGAAGGGCAAGGAGAACGAGGTCAGGACGGAGGAAGAGTCAGAGGAAGCTAGTTTTACCTGTTCTAGCTGCGGAAATTGTTTCGGCTCCTTGAACGATCTGAAGGAGCATGAGAGCTACTCGAGGTGCTCGATCACTTCCAGCAACAGCCCGGAGAAAATGGAGGACGAGGAGCCCGCAGCTGAAGAAAATGTTGCAATTGTCGTTGAACCTGCTTCTGAAGAACAATCCACCGATGGGCAGAAAAAGGGCGACAAGGAGGATTGGGGCTACCTAATAGAATACAGAGAGGCTGACGTGCAGGTTGAATGGGAACATGATCCAAGTGCGCGTAGttag
Protein Sequence: MWNSLSNINFYENLLDQKCKAKERITENDVNIAKLCRTCLREAPDTNNLLKEFEIGAMNINLDGKLLKMIDMMEESTGLKVEESDSLPHQICSSCFQNLSGAYFFRMQAHKAERTLMRLLIALSDNAEPPYEDVQHLDETSSDNAIEIALEAEDVDATRCELMEIKFDSVESTELISEAVMACEDIIEKPHETIEELKVEYIEKTDDDDSEEVGSVTNLAVEGDKEVVDEIDETSIEDYKCSECDEHFELKKALHEHIRTAHPAAKAFKCDICDAKLGNVQTLKRHMKIHQTDQKNKLCTFCGKRFARADDLKRHVRTHTNERPYACSKCPKSYKQTSELKEHMDTHSRDKLYSCEICGKCLLTRNGYYVHMKVHAGVKNHKCLVCEKSFVTSGELHSHVRHIHDKERPFACTFENCDRKFATKLSFDIHQRAHTGERPFGCTICGKKLATSSSLSEHVKLHTGAKRFHCSKCNRTFNSASSIKKHLPRHEKGKENEVRTEEESEEASFTCSSCGNCFGSLNDLKEHESYSRCSITSSNSPEKMEDEEPAAEENVAIVVEPASEEQSTDGQKKGDKEDWGYLIEYREADVQVEWEHDPSARS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00936765;
90% Identity: iTF_00937514;
80% Identity: -