Basic Information

Insect: Eutolmus rufibarbis
Gene Symbol: ham
Assembly: GCA_963920795.1
Location: OY987207.1:19098752-19118664[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.31 52 5.7 0.7 1 22 63 84 63 86 0.90

2 9 0.00032 0.053 15.1 1.5 1 23 93 116 93 116 0.94

3 9 6.9e-08 1.1e-05 26.7 2.4 1 23 122 144 122 145 0.96

4 9 9.2e-07 0.00015 23.1 1.7 1 23 151 173 151 173 0.95

5 9 2.3e-05 0.0038 18.7 5.0 1 23 179 201 179 201 0.99

6 9 0.00036 0.059 15.0 0.7 2 21 209 228 208 229 0.95

7 9 3.6e-09 6e-07 30.7 1.3 1 23 577 599 577 599 0.99

8 9 2.8e-07 4.7e-05 24.7 1.7 1 23 605 628 605 628 0.97

9 9 2.5e-05 0.0041 18.6 6.8 1 23 634 656 634 656 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.31	52	5.7	0.7	1	22	63	84	63	86	0.90
2	9	0.00032	0.053	15.1	1.5	1	23	93	116	93	116	0.94
3	9	6.9e-08	1.1e-05	26.7	2.4	1	23	122	144	122	145	0.96
4	9	9.2e-07	0.00015	23.1	1.7	1	23	151	173	151	173	0.95
5	9	2.3e-05	0.0038	18.7	5.0	1	23	179	201	179	201	0.99
6	9	0.00036	0.059	15.0	0.7	2	21	209	228	208	229	0.95
7	9	3.6e-09	6e-07	30.7	1.3	1	23	577	599	577	599	0.99
8	9	2.8e-07	4.7e-05	24.7	1.7	1	23	605	628	605	628	0.97
9	9	2.5e-05	0.0041	18.6	6.8	1	23	634	656	634	656	0.99

Sequence Information

Coding Sequence: ATGATAACCCAAACACATGGCGTCCCCCGCCAGCCGACGTGCAACGCCGCTGCTGTCTCTGGATCCCAGCACAGCGGGACCACAGGTGAGGACGATTTCAACACCTCCAACGATCTAGAGAACAGCAAATCCGTGAGCAACAATAAAGATCGTGATCAGGATTCGGACGACGAGGACGGCATTGACTTTCGGTGCGTGGTCTGCGAGCGACAGTGTTACGATATCGATCAtttGGATGACCACCTGGTGGCTGCACATCATTACCCGAAGGACGAGTTCAGGTGTGAACTCTGCCCTAAGAGCTACTGCTACCGGCCCTCGCTTCTTCGACATCGAGCCCTTGTGCATGGTGAACTGAGAAAGTATCCCTGTGAAAATTGCACAAAGGTATTTTGTGATCCATCAAATCTACAACGACACATTCGTGCCCATCACGTCGGTGCCCGAAGTCACGCCTGTCCAGAGTGTGGCAAAACGTTTGCAACATCATCTGGACTGAAGCAGCACACACACATTCACTCGTCGGTTAAACCTTTCCAGTGCGAGGTCTGCTTCAAGGCTTACACACAATTTTCGAATCTGTGTCGGCATAAGCGGATGCACGCTGACTGCCGTATGCAAATAAAGTGCGCCAAGTGCGGACAAAGTTTCAGCACCGTGACTTCACTGTCTAAGCATAAGCGTTTCTGTGATTCAACAACGATACCACCTCACCACCCCCACCAGCAGCAACCCCCACCGCCGCCACCCCAGGGGATCTCTTCAGCTGTGCCCCAAGCGATGAACACGCCACCTAATCCATTCTTCATGTTTCGCGGACCGCCCCCCTTCTTTCCACCCGGATTCCCCTCGTACGGACTTCACGGAATGTTTCCACCTAGTCCAGCACAAGCCCCCAGCTTTCCGCTACTGTTCCCCAAACCTAACCTAGATATGAGTATGGCGGAGAAGGACAGAACCTCCCCGACAAGGCATATGTCCTTAAACCACTACGGGAGCAGAAGTTCCCATGAGGACAGTGTGTACAACCACCTCCGAGCCTCCCCCGCGAGGCCTGTTCCTGTCTCTCAGCAGCAACAGCCCCTTCAACTACCGGTGCAGCAGCAACACATAACTAACAGCCACCCTTTTAAAGGCAATCACTCATCCCCCAGGAGTCGGCTGTCGAGGAGCTCCGATGAGGAAACAAATTTCTCCGCCATCGATATGAAAATGCCACTGGCAGAAAACGAGGATCGAGTTAAGGACGAAAGGACTTCGCCCGATGACAAGagccATATTAACGTGACATCGCCTTCCCCTACGCAAGAAGTAGTTCAGACCGAACAACCGCTCGATTTGTCAGTGACTAGAAAACGCAAGAAAAGCAGAAGTCCAACACCAGATCCTGTGCCCGTTAAACGGGAAGCACCGAATCAATCGTACCAGGCAAGTCCTACGCCATCAGTCTCACCGGGACCAACACCTTCACCATCTCCGCCTGGACCACCAATGGCGTATCCTCGACCTATTCACCCTGTACTCTTAGAAGCCATCTACCGGCCATCGGCTGGACTAAGCGCGGCTTTTCAGCGGCCCTTTCCTTTTTTAGGGCCAATGGGAGGTCGACCAGGCTTTGACCATATCCTTCACCGGAATGGGCCATTCCCACCCAAACCATTCCACGAAGCTTTAATGGCTGCCGGAGGGCTTTCGGGAGGTATTGGAACGGGAAAAATCAAGGACCGTTACACGTGCAAGTTCTGCGGGAAGGTGTTCCCGAGGTCCGCTAACCTGACCAGGCACCTCCGCACGCACACCGGCGAACAGCCGTACAAATGCAAATACTGCGAAAGGTCGTTCAGCATATCGAGCAACCTGCAGCGACATGTGAGGAACATACACAACAAGGAGCGGCCTTTCAAATGTCACCTTTGCGATAGGTGTTTCGGGCAGCAGACGAATCTTGACAGACACCTGAAGAAGCACGAGGCTGACGCCAATGGGATTGGAATTGGCGTCGGGGACTCGCCTTCGTCGAACGAGGCAGACCGCGAGGATGCGTACTTTGATGAGATCAGGTCTTTCATGGGCAAGGTCACGTATACTGGCGGTGTCTACACACCCGTTAGCATGGGAACCGGGGAGAACGAGACGGAGGACGGGAGCGACGCTGAAAACGAAGTGATCGCGGATAAAGACGCTCTTAACAACAACGAGGCAACAATAGAGGTCTCCACATAG
Protein Sequence: MITQTHGVPRQPTCNAAAVSGSQHSGTTGEDDFNTSNDLENSKSVSNNKDRDQDSDDEDGIDFRCVVCERQCYDIDHLDDHLVAAHHYPKDEFRCELCPKSYCYRPSLLRHRALVHGELRKYPCENCTKVFCDPSNLQRHIRAHHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCAKCGQSFSTVTSLSKHKRFCDSTTIPPHHPHQQQPPPPPPQGISSAVPQAMNTPPNPFFMFRGPPPFFPPGFPSYGLHGMFPPSPAQAPSFPLLFPKPNLDMSMAEKDRTSPTRHMSLNHYGSRSSHEDSVYNHLRASPARPVPVSQQQQPLQLPVQQQHITNSHPFKGNHSSPRSRLSRSSDEETNFSAIDMKMPLAENEDRVKDERTSPDDKSHINVTSPSPTQEVVQTEQPLDLSVTRKRKKSRSPTPDPVPVKREAPNQSYQASPTPSVSPGPTPSPSPPGPPMAYPRPIHPVLLEAIYRPSAGLSAAFQRPFPFLGPMGGRPGFDHILHRNGPFPPKPFHEALMAAGGLSGGIGTGKIKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCHLCDRCFGQQTNLDRHLKKHEADANGIGIGVGDSPSSNEADREDAYFDEIRSFMGKVTYTGGVYTPVSMGTGENETEDGSDAENEVIADKDALNNNEATIEVST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00937496;
90% Identity: iTF_00936759;
80% Identity: -