Basic Information

Insect: Eutolmus rufibarbis
Gene Symbol: -
Assembly: GCA_963920795.1
Location: OY987209.1:28181225-28184944[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00069 0.11 14.1 1.8 1 23 255 277 255 277 0.97

2 13 0.00019 0.031 15.9 1.1 1 23 283 306 283 306 0.95

3 13 0.0014 0.23 13.1 1.5 1 23 311 333 311 333 0.98

4 13 7.3e-06 0.0012 20.3 7.6 1 23 339 361 339 361 0.99

5 13 5.3e-06 0.00087 20.7 3.3 1 23 367 389 367 389 0.96

6 13 1.2e-05 0.002 19.6 0.1 1 23 395 417 395 417 0.98

7 13 8.5e-09 1.4e-06 29.5 0.7 1 23 423 445 423 445 0.99

8 13 0.00062 0.1 14.2 4.1 1 23 451 474 451 474 0.95

9 13 2.7e-06 0.00045 21.6 1.4 1 23 506 528 506 528 0.98

10 13 8.1e-06 0.0013 20.2 1.6 1 23 534 557 534 557 0.95

11 13 5.7e-06 0.00094 20.6 1.0 1 23 563 585 563 585 0.98

12 13 7.3e-05 0.012 17.2 3.6 1 23 591 613 591 613 0.98

13 13 0.033 5.5 8.8 0.7 1 23 619 641 619 641 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00069	0.11	14.1	1.8	1	23	255	277	255	277	0.97
2	13	0.00019	0.031	15.9	1.1	1	23	283	306	283	306	0.95
3	13	0.0014	0.23	13.1	1.5	1	23	311	333	311	333	0.98
4	13	7.3e-06	0.0012	20.3	7.6	1	23	339	361	339	361	0.99
5	13	5.3e-06	0.00087	20.7	3.3	1	23	367	389	367	389	0.96
6	13	1.2e-05	0.002	19.6	0.1	1	23	395	417	395	417	0.98
7	13	8.5e-09	1.4e-06	29.5	0.7	1	23	423	445	423	445	0.99
8	13	0.00062	0.1	14.2	4.1	1	23	451	474	451	474	0.95
9	13	2.7e-06	0.00045	21.6	1.4	1	23	506	528	506	528	0.98
10	13	8.1e-06	0.0013	20.2	1.6	1	23	534	557	534	557	0.95
11	13	5.7e-06	0.00094	20.6	1.0	1	23	563	585	563	585	0.98
12	13	7.3e-05	0.012	17.2	3.6	1	23	591	613	591	613	0.98
13	13	0.033	5.5	8.8	0.7	1	23	619	641	619	641	0.97

Sequence Information

Coding Sequence: ATGAATTTGCTCAAGAGCAGCTCAAAGGAGAAGATAAGTCTGGAAAAGGTTTGCCGGACGTGTTCCCTGCTCGTTGAGTCCCAAATGCTTGTCCCGCTGTTCGAAACCGATAATTCGGGAAACGTTGTGCCAGAGGAGATAATTGAGGAAGTCGACTTTATCCATTTGAAGataactCATGACGACGGATTACCTCAGCAAATTTGCAGTGAATGCCTCAGCCAGTTTACAAACATTAGAAATTTTAGGCGGCAGTGTGAAAGGAGCCAGTTAGTCCTACACGCTTTCTTCAAGGCTGAAAGTTCTGCAGAAGAGCCGCCTAGACGAGAAGGGGCCACTCCGATTTTCGAGATTGTTCAACTTGACGAGGAGTATGCAAATAATAAGGAAAGGCAAAATGAGGAATTATCCCTTGATTTTGAAGATGACAACTCCCAGCAAAATGAAGTACATGTTTCGAATAGCAATGAACTAAGTCAGGAAAATATAACTAATTGTTCGGATAATAGTTTCGCTGATGATACATCTTCAGAGAACGATTACAAGAAAGAACATCCGATTAACGAGTTTGAAGAATCTAGTTACATGGACCAGTTTGCAGATTTTATGAAAGAGGAAGTCGTTGTTTCAGAGAATGAGTGTAGCAATGATGAAGAAAATTCTCTTCCAAATGTGATGGACGATTCGCAAAAGGAAACACCGCTAAAGTCACCGCTCGaggaaacaaataaattgactaTTTCTGTGATTAAACCTCACAAATATGCGTGTCCCATTTGCCATAGAACTTTTCAGTATGTTTCGAATCGCAATACGCACGTCCAGTCCCACAATGAGGTGGGTTCGTTTAAGTGCGACATCTGCAACCAGGGCTTCAAGAGCAAGGTTTATGTGAACAAGCACAAAAAGGCTGTGCACCCTACAGGTGATTATGAGTGTCCGATTTGCTTTCAGCAGTTCCAAAATAGAGCTAAGTTCCAATATCATGTCAAGTCGCATAGTTCGAAGAAGAAGTACCAATGCAAATTCTGCGACAAGTCGTTTATGCAACAACATCACCTGACTAATCATGAGCGGACGCATACGGGCCAGAGACCCTATTTGTGTAATATCTGCGGAAAGGatTTTAAGCAGCAGTGCAATTTTAAGCTACATTTGCGCATTCACAGCGGAATAAGGCCTTACGTGTGCAATATTTGCGGGAGAGattttgcCCAGGGAGGCTCATTTACAATGCACATGCGCCTTCACACCGGAATCCGGCCTTATCAGTGCGaaatatgtggaaaaaattttatacaaaaatccaCTCTTACTGTGCACCTTCGGACCCACACTGGGGAGAAGCCCTACAAGTGTGACCAGTGCGACCGAGCTTTTGTGCAGACCCACCAGCTAAAGTACCACAAATACTCCACCCACAATGGGCCCCCTGTGGGTAAAAAAGCCCCTGCCACGACTGAGGGGAGCAGAGAATTAACTGAAAATGAGCAACAGACCCCCATGAACCCACCGTACAGTTGCAGCTTGTGCTCCAAAACCTTTAAGCTGCCCTCGTCCCTTACATCGCATATTAAGAGCCACTCGGAAGAGCGTAAACATGTCTGCAAGCAGTGCGGGAACTCCTTCAAGCGGGCGGAGCACCTTCGGATCCACATTAATGGAGTGCACCTGAAGCGAAAACCTTACGCGTGCGACTATTGCTCGAAGACATTTTCACAATCCGGGGACAGGAACATCCACATGAAGAGTCATACGCAGGAAAAACCGTTCAAGTGTCTCCACTGCAAGAAGGGGTTTAAGCTGCAGAAGTCCCTTCGGGCGCACGAGAGAATCCACACCGGTGAGAAGCCCTTTAGCTGTGAGGTCTGCTTTCAGGATTTTATGACTTACAATTCGCTAGCAGTCCACAACATGAAGCACTCCGAGGATGAAAATAAGAAGCTTAAGGCAAAGACTTTAGCGGAAGTGAACAAAGTACTCAAGGAATTTGCTGGCTGCGCTGAGGGAGATAGTCAAATTAGCCACAGATTTCAAGACCCTCCTGAAGATATTGATAGTGGGAAGCAAGACAGTGCTGAAGAAAATCCTGCTTCTCTGCTACCTGCACGTTCTCtggatatcttaaaaattgactAG
Protein Sequence: MNLLKSSSKEKISLEKVCRTCSLLVESQMLVPLFETDNSGNVVPEEIIEEVDFIHLKITHDDGLPQQICSECLSQFTNIRNFRRQCERSQLVLHAFFKAESSAEEPPRREGATPIFEIVQLDEEYANNKERQNEELSLDFEDDNSQQNEVHVSNSNELSQENITNCSDNSFADDTSSENDYKKEHPINEFEESSYMDQFADFMKEEVVVSENECSNDEENSLPNVMDDSQKETPLKSPLEETNKLTISVIKPHKYACPICHRTFQYVSNRNTHVQSHNEVGSFKCDICNQGFKSKVYVNKHKKAVHPTGDYECPICFQQFQNRAKFQYHVKSHSSKKKYQCKFCDKSFMQQHHLTNHERTHTGQRPYLCNICGKDFKQQCNFKLHLRIHSGIRPYVCNICGRDFAQGGSFTMHMRLHTGIRPYQCEICGKNFIQKSTLTVHLRTHTGEKPYKCDQCDRAFVQTHQLKYHKYSTHNGPPVGKKAPATTEGSRELTENEQQTPMNPPYSCSLCSKTFKLPSSLTSHIKSHSEERKHVCKQCGNSFKRAEHLRIHINGVHLKRKPYACDYCSKTFSQSGDRNIHMKSHTQEKPFKCLHCKKGFKLQKSLRAHERIHTGEKPFSCEVCFQDFMTYNSLAVHNMKHSEDENKKLKAKTLAEVNKVLKEFAGCAEGDSQISHRFQDPPEDIDSGKQDSAEENPASLLPARSLDILKID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01183991; iTF_00937481; iTF_00628561;
90% Identity: -
80% Identity: -