Eruf037288.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- -
- Assembly
- GCA_963920795.1
- Location
- OY987209.1:28792074-28797364[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 5.8e-05 0.0096 17.5 0.3 1 23 227 249 227 249 0.95 2 19 1.5e-05 0.0025 19.3 1.3 1 23 255 277 255 277 0.95 3 19 3.1e-06 0.00052 21.4 1.9 1 23 283 305 283 305 0.96 4 19 0.075 12 7.7 0.5 1 17 310 326 310 327 0.86 5 19 1.2e-05 0.002 19.6 3.9 1 23 504 526 504 526 0.99 6 19 7.1e-05 0.012 17.2 0.8 1 23 532 554 532 554 0.98 7 19 1.6e-05 0.0026 19.2 4.1 1 23 560 582 560 582 0.98 8 19 1.3e-05 0.0021 19.5 0.9 1 23 588 610 588 610 0.97 9 19 2.2e-06 0.00036 21.9 0.6 1 23 619 641 619 641 0.98 10 19 0.00054 0.09 14.4 1.8 1 23 805 827 805 827 0.98 11 19 1.1e-05 0.0018 19.7 1.9 1 23 833 855 833 855 0.99 12 19 0.037 6 8.6 1.5 1 23 861 883 861 883 0.98 13 19 1.4e-06 0.00022 22.6 0.3 1 23 889 911 889 911 0.98 14 19 6.4e-06 0.0011 20.5 4.3 1 23 917 939 917 939 0.99 15 19 9.3e-07 0.00015 23.1 2.0 1 23 945 967 945 967 0.98 16 19 2.2e-05 0.0037 18.8 2.2 1 23 973 995 973 995 0.98 17 19 0.001 0.17 13.6 1.4 1 23 1006 1028 1006 1028 0.97 18 19 0.0009 0.15 13.7 3.1 1 23 1124 1146 1124 1146 0.98 19 19 2.9e-06 0.00047 21.6 2.8 1 23 1167 1189 1167 1189 0.98
Sequence Information
- Coding Sequence
- ATGTCGAAAGCCTGCTTAGTCTGCGATGTACTCCATTTAGAAATGGTCAACATATTTCTGCACCCGAGGAGACTGAATACAATCCTGCGACTCCTGCTGGGACTGCAGACCACTCCAAATGACTACCTTTGCACAGCGTGTTGctacgaaataataaattcttttgattCTGAACTAAATTGCCAGTTACAGTGGAACCTACACATCCCAAAAGTCTTTAaaaaagaAACCAAACTTGATCCCGATAAAGCTGGAATTGCGTCCACCTTGAGCGAATCAAATGTGAAAATTGAGCCAAAAAGTGAGAACGAGTTAGAGGAGAACTTCggcatttttaaaaggaagctaagaaaaaatttagaaacagTAGAAAATGCAGAATACTGGGCTGAATCTTCTACGAcagATGAAGAGAACGACActaaaaggcaaaaattaaactttaagaaAGAATTCAAGACTGAAACTATGGATGTCGACTTAAGCCCGAATTATGGTGAAAGCAATGAAAGTTGTATGGAATTTTTCAAGAGGGAGACTTCAGTTGATTTGGATGATGACAATGAGGTAGGCTCTCACGATTTCTTTACCAGCAGCTTAGAATTGCAGGAACAAACGATGCAAGAAATTGGTGGTCGACACAAACggaacattaaaaaatgtacgaAGGAGAAACTATTTGCTTGCACTGAATGTGAAAAAGCGTTTACCGCATCATCAAGCCTTAATCGTCACAAGGTTATCCACACTGGAGAAAGACCTCACGAATGCCCTGAATGCGGAAAATGTTTTGCCGCATTATCAAGTCTAAATCGTCACAAAGTTATCCATACCGGAGAAAGGCCCTACAAGTGCCTTGACTGCGGAAAATGCTATACCGATTCGTCAGGTCTTACTCGTCACAAGGGTATCCACACAGGAGAACTCTACGCCTGCAGCTATTGTCCTAAAACTTTCGGTTCTGGTTACAATTTTCGAgcCACAAAAGATGACTATATCTGCAGAGGATGCTGCGACGAAGTGCTACGCGCATTcgatttaaatcaaaagtgcCAACAGCCAAACGAGCACAACCCAAAAGTGCTGGCAAGTGAGGCGACCGTTTTAGATGCCCAAACAAATTATGTTCATCCAACTGAAGGCTCAATCCTCCCAATGTACATAAAAGTGAAAGCGGAGCCCCAAAGTGAGAACGAATTAGAAACGAAACCCGAAATTTTTAGTGTGAACGTTGAGACCAAAAAAATAGGTGGATATGTAGAAAATACATCTGAAGGACTCATTGATGAGTTtcctataaaaattgaaaatttgggcGCTACCTCAGGAGGAAACGCTGGCAATAGCAGCGAAAGCTACCCGCAGTATTTCAAGAGTGAGATGCCATTTGATAACGAGGACAGTGGCGAAATAAACCAGAACGAATTCGGGTTTGCGGAAAGCGGAATGTGTTTTGTGAGATCGGCGAATCTTGAGACTAACCAGAGGACATTAACTGGAGAAAGACCTTACGAGTGCCCACATTGCTCGAAAACTTTTATCACTTCGACAAGGCTTAAGGAGCATAAAAGGACCCACACCGGAGAAAGACCCTACGCCTGTAGCTCCTGTTCGAAAACTTACATTACCGCTGCTAGTCTTCATATTCACATTCGTACTCATATGAAAGATAAGCCGTTTGTCTGTTCTGAATGTGGGAAAAGTTGTACCACCTCCCAGTTGCTTAAATATCACAAAAGAACGCACACCGGGGAAAGACCCTACGCCTGTAGTTACTGCCCTAAGTCTTACATCACCAACGGTCGCCTGCAAAGGCATATGTTCAGTCATAGGAAGGAAAAACGCGAAGGCCCCTTCGAGTGCCTCCAATGCTCCAAAAGTTTCAAGAGCAGTTGGGCTCTTAAGGTTCACATTCGTATGCATGCACAGGAAACAAATGCGTCCGATTCGACGCAAAGTTCCCACCAGTCCAACAAACAAAAGCAAGAGGTGCAGAATGATGAAATTGACCCTGAAATAGGGGCGACACCGTCAATGGAAGTAAAAGAGAAAGACGAGCCCCAGGACGAAGATGAATCAAAAGAGGACTTCAAGATTTTAACTGCTAAATCTAGAATCCATAAGCTATCGAAAGAGCTTAGAGTGGACGAAAAAGCAGAAGACGTACCTGAAGCACAAAGTAGCGCTATAAAGTTTTCTGGAAAGAAGAATTCTCTATCATTCTCAGGACAGAAGGATGGACAACACTACGAGATTTGTCAGAAGCTCTTCAAAAAAGAGAACAGTGACGacaacaataaatataatcacAATTCAGAATTTAATCTACAGCATGAACTAAAAAATGGCGAAAATGTGCCAGAAGGTCTCACACAAAAACTTTCCAGCAGAATGCATAAGAAGGAGAAACCGTTCTCGTGTTTAGAATGcggaaaaagttttcttacaaCGACAAAGCTTCAAATTCACAAGAGGACCCACACTGGAGAAAGACCTTACAAGTGTAATATCTGTCTGAAAACATTCGTTAGCTCATACAAGCTAACAGAGCATAAGAGGATTCATATGGGAGATAAACCTTACGAGTGCCGCTTCTGTTCTAAAACTTTCCTTAGGTCAACTGAAGTCCAAGGACATGAGCGAACTCACACGAAGGAGAAACCTTACATTTGCTCTGAATGCGGAAAAGGTTTTGTCACCTCGTCAGTTCTTAACCGCCACAAGAGGATCCACACGGGAGTAAAACCCTACGTCTGCAGTCACTGCGCTAAAACTTTTACCTCCAAATTCTATCTACAAACTCACATACGCTCTCATACGAAGGAAAATCTGTTCGAGTGTTCAGATTGTGGAAAGAGTTTTAcaacttcgaaattgtttcaGGATCACAAAATGACCCACACTGGAGAAAGACCCTACGCTTGCAGTCACTGCTCTAAAACTTACATTAATCGTAGTGGTTTGATAAATCACACGCGCAGTCATATGAAAGGAGAACGTAAGAGAAAAGGTCCCTACGAGTGTCTCCAATGCTCTAAAGCCTTCAGCAACAGTTGCGCTTACAAGGTTCATGCTCTCATGCATTGTAAGCAGGAAAATTCATCCGATTTCACACAAACGCCCAATCAGTCTAACACGCATACGGAGACAGATTTAAtCGCTGCGAAGGAAGCAGGGGCGATGGATACTAATAAGtcaaaagaaaaactgaagATGAGCGAAAGTACGGAAGATTGGTCTAAAGCTACTGATGTTGCTGACTCAAGACAGAATGCTGAAGGTATCAGTGAAGGAtctcgaaattattttaagaaggaGAAATCAGTTGATATCGAGGATAAAGATAACGACCAAAACGGAGAAAGATTCTACATTTGTAGTTACTGTTCTGAAACTTTCCATTCTAGTAGGGATTTCCGGATTCACGTGCGGAATCATAAAAAGGATAAGATGCCAGACTTTAAGAGTCATAAGAAGGCACACATAATAGAAAGATCGTACGCTTGCAGCTACTGCTCTAAAACTTACATCAACAGTGATCATATGCAAAAGCACATGCGAATTCATATCCGGGAAAAACATAATGTAGAAAAGTGGGGGAAAGAAATGGGCATCGACACCTCACAAAAACTTCTTCAGCCTACCACGTATAGACTGGGAGCACTAAAGGGTGATGAAGTGGTTTCGAATCAAGAAATCGACCCTGTGACGACGATTTTAGTAGAGGATTTCGATGCTCTTGGTGGGGAAACTGCGAAAACGTAG
- Protein Sequence
- MSKACLVCDVLHLEMVNIFLHPRRLNTILRLLLGLQTTPNDYLCTACCYEIINSFDSELNCQLQWNLHIPKVFKKETKLDPDKAGIASTLSESNVKIEPKSENELEENFGIFKRKLRKNLETVENAEYWAESSTTDEENDTKRQKLNFKKEFKTETMDVDLSPNYGESNESCMEFFKRETSVDLDDDNEVGSHDFFTSSLELQEQTMQEIGGRHKRNIKKCTKEKLFACTECEKAFTASSSLNRHKVIHTGERPHECPECGKCFAALSSLNRHKVIHTGERPYKCLDCGKCYTDSSGLTRHKGIHTGELYACSYCPKTFGSGYNFRATKDDYICRGCCDEVLRAFDLNQKCQQPNEHNPKVLASEATVLDAQTNYVHPTEGSILPMYIKVKAEPQSENELETKPEIFSVNVETKKIGGYVENTSEGLIDEFPIKIENLGATSGGNAGNSSESYPQYFKSEMPFDNEDSGEINQNEFGFAESGMCFVRSANLETNQRTLTGERPYECPHCSKTFITSTRLKEHKRTHTGERPYACSSCSKTYITAASLHIHIRTHMKDKPFVCSECGKSCTTSQLLKYHKRTHTGERPYACSYCPKSYITNGRLQRHMFSHRKEKREGPFECLQCSKSFKSSWALKVHIRMHAQETNASDSTQSSHQSNKQKQEVQNDEIDPEIGATPSMEVKEKDEPQDEDESKEDFKILTAKSRIHKLSKELRVDEKAEDVPEAQSSAIKFSGKKNSLSFSGQKDGQHYEICQKLFKKENSDDNNKYNHNSEFNLQHELKNGENVPEGLTQKLSSRMHKKEKPFSCLECGKSFLTTTKLQIHKRTHTGERPYKCNICLKTFVSSYKLTEHKRIHMGDKPYECRFCSKTFLRSTEVQGHERTHTKEKPYICSECGKGFVTSSVLNRHKRIHTGVKPYVCSHCAKTFTSKFYLQTHIRSHTKENLFECSDCGKSFTTSKLFQDHKMTHTGERPYACSHCSKTYINRSGLINHTRSHMKGERKRKGPYECLQCSKAFSNSCAYKVHALMHCKQENSSDFTQTPNQSNTHTETDLIAAKEAGAMDTNKSKEKLKMSESTEDWSKATDVADSRQNAEGISEGSRNYFKKEKSVDIEDKDNDQNGERFYICSYCSETFHSSRDFRIHVRNHKKDKMPDFKSHKKAHIIERSYACSYCSKTYINSDHMQKHMRIHIREKHNVEKWGKEMGIDTSQKLLQPTTYRLGALKGDEVVSNQEIDPVTTILVEDFDALGGETAKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -