Eruf000694.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- JRKL
- Assembly
- GCA_963920795.1
- Location
- OY987204.1:7204096-7205070[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-10 2.9e-07 31.2 0.0 2 45 13 55 12 55 0.91
Sequence Information
- Coding Sequence
- ATGCCGCCAATAAAAGGACAGATGTTTCATTACTCTGAGGCTGATATGGAAGCCGCTATTCAAGAATGCAGACGAGGAGTTCCGACGTCAACTGCGGCTAAAAAATTTGGGGTACCTAGGGTAACTCTGCTGAATAAAGTAAAGGGTAAGACACCAATGAAACGAAAAGTGGGAAGAACATGCTACATCTCAGATGATACTGAAGCTTTGCTTGTAAAGTGGGCTAAAGCAATGGTGAAACAAGGATTCCCAATAGGCAAAGAGAATTTACAAGAtagtgtgaaaaaaattgttgatgatTTGAATTTAGAAACTCCTTTTAAAGATGGGAGGCCTGGTAAAAGACGGTAcagcagttttttaaaacggcACCCTGAGCTTATCCCTAGACAGCctcaaaatttaacttcatCCAGAGCTTCAGTCACAACATCACAGTTAAAGAATTGGTTTAAAGAAGTCAGCACCTATcttgaagaaaacaattacacaaatattttggttgaacctaatcgaatttttaatatggatGAGACTGCATTTTTTTTGAATCCGAAAGGGAACCAGGTACTAGCAGCTAAAGGCGAAAAATCGGTGTACCAGCAAGTTAACTCGGACGAAAAAGAATGTTTCACAGTTCTTTTAGGTGGTAATGCTGCTGGTCAAGTTCTACCGCCCAtggttatttttaagtatttaagaaTACCAAGAGAATTAAGCTTGTCTATTCCTGTAACTTGGGGTATTGGACGGTCCGACAGTGGTTGGATGACGATGGAgacattttatgaatatatctGCAATATATTTGATAAATGGTTGAATGACAATGGTATTCAAAAACCAGTCATACTTTTTATGGATGGGCACACATCACACATGTCATTCCACGTGAGCAAGTTTTGTTCGGAAAATGGGATAATCCTAATTGCTCTCTTTCCTAATGCCACTCATCTCTTACAGCCCAtgcactga
- Protein Sequence
- MPPIKGQMFHYSEADMEAAIQECRRGVPTSTAAKKFGVPRVTLLNKVKGKTPMKRKVGRTCYISDDTEALLVKWAKAMVKQGFPIGKENLQDSVKKIVDDLNLETPFKDGRPGKRRYSSFLKRHPELIPRQPQNLTSSRASVTTSQLKNWFKEVSTYLEENNYTNILVEPNRIFNMDETAFFLNPKGNQVLAAKGEKSVYQQVNSDEKECFTVLLGGNAAGQVLPPMVIFKYLRIPRELSLSIPVTWGIGRSDSGWMTMETFYEYICNIFDKWLNDNGIQKPVILFMDGHTSHMSFHVSKFCSENGIILIALFPNATHLLQPMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717687; iTF_00837428; iTF_00837427;
- 90% Identity
- iTF_00717687;
- 80% Identity
- -