Eruf012295.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- -
- Assembly
- GCA_963920795.1
- Location
- OY987205.1:40811229-40811651[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-11 2.8e-08 34.5 0.0 1 39 16 54 16 58 0.94
Sequence Information
- Coding Sequence
- atGCCACGGCGTTACACTccaaaagcaaacaaaaaactGAGTTGGACGGAGGACCAACTAAAATTGGCAGTTGAAGAAATCCTCAGCAAGAGATGTACTTTTACACAAGCTGCTGCAAAGTTCGAAATACCCCGTTCaacattaatttcaagaaTCAAAGGATGGAACCAGAGACCAGCTGTCGGTGGCTTGGCGCCACACAAAGGAAGAAACCCCGAACTAAGTCCTgaagtggaaaaaataatagtcgAAAGTATCAGCGCTCTGAATAAATGGGGATTCGGAATGAGCAAATCTGAAGTTTTAGATTTGATTAAAGAATACGTGACAAAGAACGAAATCCCCACAAGATTCAAAAACAAACGTTATTATAACATTGTTCAGTTGTCTTGTTCAATTTTGTAccttactataatattttaa
- Protein Sequence
- MPRRYTPKANKKLSWTEDQLKLAVEEILSKRCTFTQAAAKFEIPRSTLISRIKGWNQRPAVGGLAPHKGRNPELSPEVEKIIVESISALNKWGFGMSKSEVLDLIKEYVTKNEIPTRFKNKRYYNIVQLSCSILYLTIIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717672; iTF_00717674; iTF_00717675; iTF_00717677; iTF_01431836;
- 90% Identity
- iTF_00717672; iTF_00717674; iTF_00717675;
- 80% Identity
- iTF_00717674; iTF_00717675;