Eruf002376.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- -
- Assembly
- GCA_963920795.1
- Location
- OY987204.1:18637057-18639170[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-12 5.7e-09 36.7 0.0 1 38 73 111 73 117 0.92 2 2 5 3e+03 -0.8 0.0 19 28 162 171 162 171 0.92
Sequence Information
- Coding Sequence
- ATGGTGCCTCAGAAGAGCCCCATCCTTAACGCTTTCCTGTACCCAAGGAAAGCCCTCATCTATAATTGTTTTACCGCACCGAAGGAGGAGCTCCCCTCACTGGGCCGGAGGATGCTTCAGGAAACCCCCTCCACCAGCTCATCACCGCCGCCAGCGCCGACGCCGGAaGTCATGgtgcgaaaatataaaacaaaggGTACGCGTACTCAAGAGGTGGATGAAGAGTCCATGAAATTAGCAATTGATGACGTAATTCAAGGACGGTTGTCGCATAGGAAAGCCGCGTTAAAATATAACATCAAGACATCGACGTTGGAAAGCAGGGTCAAGAAATTCAAAGACAGCTCTAACACCGATGGACCCCCACGAACATTTCATTCTAAGTTCACAAGTCTACAAGTCTACTCCTTGGAAGAAAAGACACGCTTAAATGACTACATTATTAATTGCTGCAAAATGCATTATGGGCTAACAATAGTACACATTCGCAAACTTGCCTACGAATACGATGTAGAGATAGCGATGTAG
- Protein Sequence
- MVPQKSPILNAFLYPRKALIYNCFTAPKEELPSLGRRMLQETPSTSSSPPPAPTPEVMVRKYKTKGTRTQEVDEESMKLAIDDVIQGRLSHRKAALKYNIKTSTLESRVKKFKDSSNTDGPPRTFHSKFTSLQVYSLEEKTRLNDYIINCCKMHYGLTIVHIRKLAYEYDVEIAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -