Eruf002818.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- bab1
- Assembly
- GCA_963920795.1
- Location
- OY987204.1:22532900-22541047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-18 4.3e-15 56.3 0.0 2 45 482 526 481 526 0.96
Sequence Information
- Coding Sequence
- ATGTCGTCAGtgcaacaattttgtttgcgGTGGAACAACCATCAGCCGAATTTCATTTCTGTGTGCTCCTCTCTACTGCACAATGGAACGCTTGTGGACGTGACTCTCGCGGCGGAGGGAAGGCAGCTGCAGGCACACAGGATCGTGCTTTCCGCCTGCAGTTCATACTTTCAGTCACTCTTCGCTTCAAATCCCTGCCAACATCCAATAGTAATATTAAAGGATGTGCATTTCAATGACCTTAAAACTATGGTTGACTTTATGTACTATGGTGAAGTGAATGTATCTCAGGAGCAGTTGCCACATATCTTGAAAACAGCTgaaatgcttaaaattaaagggtTAGCTGAAATGCCTGATGCAGCTGCTTCATTGACAAAATCAGAAAGTAAATCCAGTTCAGAACAGGCTGAAGCTCTCCAAGGCGGAGGAAGTGGCTCTGATTCATTATGGGGTAGCACAGAATCACAATTCCAgcaccatcatcatcatcaccaACAAACGCAATCACATCATCAGCAGAGAAGAACTCCATCACCTACAGTAGCAGGATCATCACCAGCAACTAGAAGGAAACGCTtaagaaaatcttcaaatagTGGCTCTGCAGAACGCACATCGGAGGAGCAGGGTAGCATAGAAGGTTCttcaaacattaatttatctCAAATGAGTCAGATGTCTTTTGGGGCAACTGCATCCAACTTAGCGCAAAccattcatacaaaaattatcaaagaGAGCTCAAGTACGGACACAGAAACTCATCCCCAAGATTCTTCTCAAGAAAGTATTGAAGATTCTGGCAGTCATCAGCATCATGTGCAGCAAATTAAACCTGAAGTAGATATTTCGGGGGTACAACAATCAATACCTCTTGACATATCTGGGCCAGGGACACCTTCAGAGCACGAAGGTCCCAGTGTAAGCTGTTCTCAATCTCAATCATCTCATTCGGGTGTGCAATGGACGGTTGTCGACTCAAATTACTCACGCTTTTCGCTGCAATCATGCCAAGGCAATATCTCAATCGGTGATAATAATCAGACATCGGAAAGTGGAAATAGTACCACTAACGGACAACAGCATGAGCAACAAAATGCCAGTACTTCAACAGGAAATTCGGTTGTAACATCGAATCAACAGAACCAAGGACACATACAAATGCACTATCAAGGATCATCCTATACTCCGCAAATCATATCTGTAAACAGTCTCGTCAGCAgttattcacaaaatttatctaCTCCAACATCACCAAATGAGTCTAGCATGGTGCAGTCAGTTTATAGTCAGGGCCCCACACCTACTCAGTCTCCTGTTCACCAAATAGCGTCCACAACTGCCAATAATACAACAGCACCGAATGCCACAACGCAGTGCCAGCAGACACAGGTAACTCCAGCGCCGCAGAAGAGAAAGAGATCTGTGAATCCTCAGGGggatgaaaattttcttagagCTCTAGAAGCCGTTCGATCCGGAGGCATTGGATTTTGTAAAGCGGCTCGACTATATGGAGTCAATAATAGAACTCTCTGGCTAGAGTATAAAAAGCGTGGCTATCCAATAAGTAGGCCCAGCATCAAAAGTCGTATTAAATTAGAACCAAATATATCTCCGCCTCCTTCAAGCACGCCAACCAACGAGGAAACGACCATAGAGAACTACACTCACATAAACCAGCCAACAATAAATATGCAAGTTCCCCCAACTTCGGAAACACCCACGCCAATCATGTGCGCCCCACATGCTCATCCTATGGGCGTTATGAGCTTTTTAGACACTAGACACATGGAGTTCTCCACAGGGATTCACACGTTGTCACGGCAGCGCTACTCAGATGGTGCGGTCAACGTCAATCCCACTCCCATGAATATGCAAGGTCTTAACTTCAATTCAATGTAG
- Protein Sequence
- MSSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHRIVLSACSSYFQSLFASNPCQHPIVILKDVHFNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAASLTKSESKSSSEQAEALQGGGSGSDSLWGSTESQFQHHHHHHQQTQSHHQQRRTPSPTVAGSSPATRRKRLRKSSNSGSAERTSEEQGSIEGSSNINLSQMSQMSFGATASNLAQTIHTKIIKESSSTDTETHPQDSSQESIEDSGSHQHHVQQIKPEVDISGVQQSIPLDISGPGTPSEHEGPSVSCSQSQSSHSGVQWTVVDSNYSRFSLQSCQGNISIGDNNQTSESGNSTTNGQQHEQQNASTSTGNSVVTSNQQNQGHIQMHYQGSSYTPQIISVNSLVSSYSQNLSTPTSPNESSMVQSVYSQGPTPTQSPVHQIASTTANNTTAPNATTQCQQTQVTPAPQKRKRSVNPQGDENFLRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRIKLEPNISPPPSSTPTNEETTIENYTHINQPTINMQVPPTSETPTPIMCAPHAHPMGVMSFLDTRHMEFSTGIHTLSRQRYSDGAVNVNPTPMNMQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431754;
- 90% Identity
- iTF_00628160;
- 80% Identity
- iTF_00717898;