Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963920795.1
Location
OY987208.1:30746677-30749256[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-15 1.4e-12 48.2 0.1 1 45 11 56 11 56 0.95
2 2 4.5e-18 2.6e-15 57.0 0.0 1 43 455 498 455 500 0.95

Sequence Information

Coding Sequence
ATGTCGGCAGTGACGGGGCGGCGAACTTACACAGAAGAGGAACTGCACAGCGCGTTGCAAGACATAATCAGCGGGAAACTGGGGACACGGCGAGCGGCTGTTCTCTACGGCATTCCGAGGTCAACGCTGCGGAACAAGGTCTACAAGATCGCGATGGAACAGAAGCGGGAGGCACACACCCTCCACCCGCCGGTCCTCGACGAGCTTGTGGACCCAGACGACGAGGACAAGGAGCTCTCGGGGGACGAGGATAAGGAGGATAAACTCCTGGCCGCCTCGTTGCAGGCTGATGGTCTTGCCAGGCTCACGACATCACAATTAGTCGCCTTTCAAAAAATGACCAAAGGTTGTGAAAGTAATCAAACGGACATCAAACCTTCAACATCACTCGATGCGCAAGCGAAAATTTCACCGTCGACACCCACACCACAAACGCCCCCAATAACCCCAAATCCGTGGTTCGATCCAAATATCCTGCTACAGAGCATTTTGCTAACTGGCGGTCTTACGGCCCTCCCCGGTCTGGTCCAGCCGAATGCTGAGGATCCGGTCAGGGAGCTATTCAGCAACCTGATGATCCAGCAGGAGGAAATCAGAAAGAGCTCAGCAGCGACTAGTGATATACTAAATAATGGCAAGCCAAATTTATTAGACCCTAGACTACTAATGCATAATCTGCCGATGCTGCAGCcccaacagcagcagcagcagcaacagcccCAACCACAGCAGCTCCAGCACTCCCCGTATCTTTATCAAAATCGCTTACCAAAGTCTGAAACGCCAGAGACTAGTTCATCGATGGACATTGTTGAGGGCAGCGATGATccttcagttattttgaaaattccgtCCTATAAGCGGGTAGTTGTGTCCTCATCATCTTCAGGTAAAAATGGTGAGCACCTTAGTTCGCCAGCGCCATCTACCACTGCGCCGCCGATACAATCGCGTAGTAGTCCGCAGCAACCAAATAATTTGCCCGGAATATCGCCTCCGTTAATACGGCAAAGTAGTGAATCACAATCTCCgccaatattttcattaaggGATGTTATTGCAAATAGCATAAATAGAACATTTAATCAGCaagccgccgccgccgctgccgcTGCCTCTGTGAGGGAGTCGACAACGCCAAAACCGAatcaaattcaagaaaatagcGAACAACAAAAGCGGGCAAGTATATctgttataaaaaatcttgGTGGTACAGATATATCACGATTTGCTGCAACACCGAATCTATTGAGTAGCAATTCAAATAGTGCATCATCCCAAAGTACTTCAAGCGGGAGCGGTGGTGGGGGTGTGGGCGGTAAGGGTACAAGACCAAAGCGAGGTAAATATAGAAACTACGATCGCGACAGTCTCGTTGAGGCTGTTAAAGCTGTACAACGGGGCGAAATGTCGGTCCATAGAGCTGGAAGTTATTACGGAGTACCTCATTCAACTTTAGAATATAAGGTGAAGGAGCGGCATTTAATGAGGCCAAGGAAACGAGAGCCAAAACCTCAACCCTTAGATGACCGGACAGGGAGTAGTAGCTGTAGTAGTTCAACAACCTCTAAAAACACAAGCATTCCAGGTATTGCGGCTGTTAGTAGTTTAGATAAGATGAAGCCATCTTTAGCTGCACAAAAGCCAGCTTTGAAGAGTAACCCACCATTCCCAAGCACATCACCAAATGGCATGAAGGTACCAATGTTCGATCCGGCTATGGCTGCACAATTGCAGTATTCGCACCTATTTTGGCCCCATACGGGCTTTCGAGGTCCTCCAATGGATTTTCCAACAACATCTGGGGGTGGTTCGCAGCCCGGTCCGGCTGGACCAACATTTCCGCCCAACGCTGAGGGCTTTATCGCTTCACAAATGTTTCAAAGATTTCACGAAGAAAACAGACTGAGTGGCAGCAATATGAGCAACACGACCAACACGACCACTTCAACGTCTATGGCTAGTAATAAGTTTAGTTCGAATAATTCAAATCCTCCGAATAAAAGTACTCGTGAAATAGCCGAAAGCCTCTACGATAATGGGGGAGCAAATGGATCCTTTCTGGACGGTATAATACGGAAAAGTTTAGATCGTAAACCGATCGATATTCCGCATGGTGCCCTAATAGACCAACTTGTGAAAAATACAAGAACGCTAGGTAGTAATAGTGACCAATTAACAAATCAAAAGACCAAAAGGCCTGCCAGCCCAAGTAATTTCCCTGTGATCGACATAAAACGCGAGCGTGCAAGTCCCACCACATCAGTCTCATATGAAACCGAAAACCGCACCTCAGCGGAACTCGACATATCAAAAGAAGCAACCGAAAGTTTGGCGAAGATCTGCGATGGGCGTGGCATTAAATTAGAGGATCCACTACAGCCCCTTTCCCAAATACACCACCACCACTCCTCCTCCTCATCGTCGCTGCACCGCCACCATCAGTCTCAGCACCATCCTGGAGGGGGCGGAGCCTCAAATATCCGGCCCCTTTCTGTCGAAGACCTCAACGGAAGCAGCACCAGCCTCCACGAGAAGCTAGGCCAAATCAAGAGCGAGAAGGAGGATGTTTTATAG
Protein Sequence
MSAVTGRRTYTEEELHSALQDIISGKLGTRRAAVLYGIPRSTLRNKVYKIAMEQKREAHTLHPPVLDELVDPDDEDKELSGDEDKEDKLLAASLQADGLARLTTSQLVAFQKMTKGCESNQTDIKPSTSLDAQAKISPSTPTPQTPPITPNPWFDPNILLQSILLTGGLTALPGLVQPNAEDPVRELFSNLMIQQEEIRKSSAATSDILNNGKPNLLDPRLLMHNLPMLQPQQQQQQQQPQPQQLQHSPYLYQNRLPKSETPETSSSMDIVEGSDDPSVILKIPSYKRVVVSSSSSGKNGEHLSSPAPSTTAPPIQSRSSPQQPNNLPGISPPLIRQSSESQSPPIFSLRDVIANSINRTFNQQAAAAAAAASVRESTTPKPNQIQENSEQQKRASISVIKNLGGTDISRFAATPNLLSSNSNSASSQSTSSGSGGGGVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDDRTGSSSCSSSTTSKNTSIPGIAAVSSLDKMKPSLAAQKPALKSNPPFPSTSPNGMKVPMFDPAMAAQLQYSHLFWPHTGFRGPPMDFPTTSGGGSQPGPAGPTFPPNAEGFIASQMFQRFHEENRLSGSNMSNTTNTTTSTSMASNKFSSNNSNPPNKSTREIAESLYDNGGANGSFLDGIIRKSLDRKPIDIPHGALIDQLVKNTRTLGSNSDQLTNQKTKRPASPSNFPVIDIKRERASPTTSVSYETENRTSAELDISKEATESLAKICDGRGIKLEDPLQPLSQIHHHHSSSSSSLHRHHQSQHHPGGGGASNIRPLSVEDLNGSSTSLHEKLGQIKSEKEDVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00628157;
90% Identity
iTF_00937189;
80% Identity
-