Basic Information

Insect: Eutolmus rufibarbis
Gene Symbol: -
Assembly: GCA_963920795.1
Location: OY987205.1:51739683-51745148[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.7e-10 1.6e-07 32.0 0.0 1 38 416 454 416 459 0.90

2 4 3.3e-13 1.9e-10 41.4 0.1 2 39 471 508 470 511 0.94

3 4 3.1e-17 1.9e-14 54.3 0.0 1 45 525 570 525 570 0.98

4 4 1.5e-17 8.8e-15 55.3 0.0 1 43 577 620 577 621 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.7e-10	1.6e-07	32.0	0.0	1	38	416	454	416	459	0.90
2	4	3.3e-13	1.9e-10	41.4	0.1	2	39	471	508	470	511	0.94
3	4	3.1e-17	1.9e-14	54.3	0.0	1	45	525	570	525	570	0.98
4	4	1.5e-17	8.8e-15	55.3	0.0	1	43	577	620	577	621	0.96

Sequence Information

Coding Sequence: ATGTGCAGAAAAAAGGGACAAAGCGGGTCTGGGTGGGGATGGGGATGGGATGGGAGAGGGTTCCAGAGGGTTGTgGGATTGCTGAGAACTGCTGAGCAGTTAAAGATCAAAGGTCTTTGCGAGACCGCAGAAACAGTTGATGAGGTATCATCGGAAACAGCGACAACAACAACAATCACAGTTCCAGAAACAATACCGATTACAAATATCGGAAACACAAATACCCTCACCCACGTAAATAATACCACTCAGAGGAAGACACGTGTCAGAAAACGTTCCAAATCACCGGACACAAATCAATCGATCATCAACGGAACTCAGACCTTCAACGCATCAGCAATTGTAAACCTTAATCCATCGTCAACTTCGACAATCACATCTGGAACAGCAGTGTCAGGTGGAAACGCCATAACAACAACTGCAATCACACATTTCAAAACCGAACATCAATCCCAGGTGACCAGCTCGAATACTGATTCTGTTTCTGACGATATTGGATCGAAgccaacaaaaatttgcaaaaccGAAGATTCAGCAAATAATGGAAGCGGGGTTGTCACCCCAGGCACTGCTATCGTAACGCAAATTGTTGTTGCACGAGACGGTAAAGACAAAAACATGACCAGCTTAGGTATGGGAATGaacgGCGGTCTGTTGGGCGTTCCAATGGGCTTCCTAGACTTTGCACCGGAACCGCCGGCACCTTCTGCTACACCTGTTACAGAGCACGTTGACATGTCGTGTCCACCAAGCGCTGATACGAGAGACTTATCAAATCCCACCGAAGCCCTCGATATAGACAATCAGATTGCCCAACATATAATTCATCGGCTCGATCAATCGCCAATGCATCAAATGCAACATCAGTCTACGACCGACGATACAAACTCGAATCTCATCCAGAACATCAAAAGCGAAGTAGTCGATGTTAAACATCATGTTCAACAACAGCTTCAAACCCAACAAACACAGTCCCACCAACAACATACCCACCACCAGGATATATCGGGATCCACCGTAATGGAAATTGATCCGAGCAATATAAAACACGAACCGGGCATGATAATAACCCCAGAAATCGTCACTATGATGACGACAGGACATATGGATATTTACAATTCGGATACAAGCGAGGACTCTCTAATGATTGCGAACGGATCTCCCAACGATAACAATGAACCACACTATACGAATTTGGATCAGCAACAGGACATGAAATGCCAGCCGAATGGAGCAAAGACTTGGACTCAAGAGGACATGAACTCTGCATTAGAAGctctgaaaaatcaaaatatgagtTTGACAAAGGCATCTGTAACGTACGGTATTCCGCCGACAACATTGTGGCAGAGGGCTCATCGAATGGGCATTGATACACCGAAAAAAGAAGGCACTACAAAATCATGGAATGAAGAAGCCCTGAACAATGCCCTTGAGGCTCTTCGGACCGGACAAATATCAGCGAACAAAGCCTCAAAGGCATACGGAATTCCGTCCTCAACTTTGTACAAAATAGCACGTAGAGAAGGTATACGATTGGCGGCACCGTTTAATGCAGCTCCAACAACATGGACACCCGAAGATTTGGAACGTGCTTTGGAAGCTATTCGTGCTGGTCACACCTCCGTCCAAAAAGCTAGCACGGAATTTGGTATTCCAACtgGAACACTATACGGTCGCTGTAAGAGAGAGGGAATTGAATTATCTCGATCTAATCCTACACCATGGTCTGAAGATGCTATGAACGAGGCTTTAGTCGCAgtgagGGTGGGCCACATGTCCATTAACCAAGCCGCAATCCATTACAACTTACCGTACAGCTCACTTTATGGCCGATTTAAGCGGGGAAAATATGATACAAATGCAACAAATGCCAACACAAACAACACGAGTGCAAACACAAGCGCTAATATTGAAATGATCGAGCATAGTCCAGAGAATTCGTTGCACATATTTCAGCAATTTCAATACAGCCCCGGGCCCTCAAACACCCAGACCCATCAtcatcaacaacaacaaccccagcagcagcagcagcaacaacaacagcaacaacaacaacaacagcagcaacaacaacaacagcaacaacaacaacagcagcagcagcaacaacaacagcagcaggcACAACATCAGCAACATCAGCCACAACATCAACAACACCAGCCACATCAGCAACATCATAttcaacaacagcagcaacagcatcAACAACACCCACAGCAACATCATCCACATCAACACCTACAGCAACAGCAGGATGTTGTAACCTCTTCCAGCCAAGTTCACACGCAAACCGGCCAAATTCAGCAAATTTACCACCACCACAGCACTTCGGAGAGGAGTTGA
Protein Sequence: MCRKKGQSGSGWGWGWDGRGFQRVVGLLRTAEQLKIKGLCETAETVDEVSSETATTTTITVPETIPITNIGNTNTLTHVNNTTQRKTRVRKRSKSPDTNQSIINGTQTFNASAIVNLNPSSTSTITSGTAVSGGNAITTTAITHFKTEHQSQVTSSNTDSVSDDIGSKPTKICKTEDSANNGSGVVTPGTAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMSCPPSADTRDLSNPTEALDIDNQIAQHIIHRLDQSPMHQMQHQSTTDDTNSNLIQNIKSEVVDVKHHVQQQLQTQQTQSHQQHTHHQDISGSTVMEIDPSNIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMIANGSPNDNNEPHYTNLDQQQDMKCQPNGAKTWTQEDMNSALEALKNQNMSLTKASVTYGIPPTTLWQRAHRMGIDTPKKEGTTKSWNEEALNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDTNATNANTNNTSANTSANIEMIEHSPENSLHIFQQFQYSPGPSNTQTHHHQQQQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAQHQQHQPQHQQHQPHQQHHIQQQQQQHQQHPQQHHPHQHLQQQQDVVTSSSQVHTQTGQIQQIYHHHSTSERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01431749;
90% Identity: iTF_00628156;
80% Identity: -