Basic Information

Gene Symbol
ct
Assembly
GCA_963920795.1
Location
OY987206.1:47409422-47420918[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.4e-27 4.5e-23 82.2 0.0 3 71 487 556 485 562 0.94

Sequence Information

Coding Sequence
ATGGAATCAATGGATTCCTTCGGAGGATATCCCGGCGTGCATGGTGGTAGTAGTTTCATCCTTCGGGAGATATCTGCGCCTCAGCAGCACACCCGGCCCCCGATAAAAGCCCTAATCGATGAAGTAACACGATTACAAGCCCTCCACGAATCACACATCGTACAAATACAAAGACTTGAAGAGCGTTTGGAAGCGAAACGCCAGCACATATTAAGGCTAGAGGCACGCCTTGAAAAGCAAACAGATCTCCAGGATGCTAAGAAGGAAAATAAtaatttaagGTCACTGGACATGTCGAGTCCGGCTGTCGCCgctgcagcagcagcagcagccgccGTCGCATCGGAGTCGAAGCAATTTCAGGAGCTTCTGTTCGAACGGACCAAAGCCCTGGCCGCCGCTCAAAGTGAGGCGCTCAACAAATCCAATTCGAACGCAGACGGATCATCGTGTGCAGCGACAACAGCCGCAACAGCGCTAGCGCCTGCCGTAGTTGTGGCCGCCACTACGAGCAGCTGTCACGCCGCGAATGAGCCATCTGGCGGCGGCGTCAGTGCACCAGCCCAGGGCCAGGCGGCCAGCGCCGGGACGCCGGGAGGCACCACCACGAGCACCGTTTCGGTGAAGAGCGCCAGTGCGTCCCCGTCATCAGTCAGCAGCGACACAATAAAAAAGTTCCAAACAAGTGCCCGGGCCCGGTCCGCTACAAGCACCCCGTTCCGGGAGAGCCCCAAAGACGGCAGCTCGCCCCAGCTGCTGACCAGCAACTTCCAAAATGTCGAGCAGTTCGGCTCGTTCCTCGGGGAAGAGATCGTTAGTAGCTGGCGTCGCGGCTACGAACTGCCCCCGCCGCCGCCCCAGCTGCTGCCCTCGATGGCGGCCGCTGCGATAGCCACGTCAGCcgcaacaacaacaacaacgcCAATCCCCTTTCAGCAGCAATCAGCGAAACCGCCGCAGATAGCGCCCCAGCCGCCGCAAGGACCTTCCACCACAGCCCTTTTAAGCCAATTAGTTAACTCGACATTTTCTAATTCTCTCAAAACAGATACGACGCCGGCGGGCTCCCTAAACCACTCGCACCAAGACGCCGAAAAGGCGTGTAGCCACCACGAGACCTCCTCGACGGCCAGCACCCCGAACCTCCAGGAAGGGCGGTCAGTGGAGGAGCACATGAACGGGTCCAGTGGCGGAGGCATGACGCCGATGTCCCTCTCGATGGTCAAATCGGAGGACAACAACAACACGCTGGGCCCGCTGCCGCACGTCCCGGCCGGGTTCCTGCCGGGGCTCCCGTTCCAGTTCCAGGACCGGGGCCACTTCCGGTTCGCCGAGGATCTCCAGCTGCCGCCCGGCTCGATGGCCGGCCGTCTCGGGGAGTCCCTGATCCCGAAGGGAGACCCCATGGAGGCGAAGCTCCAGGAGATGCTCCGCTACAATATGGACAAGTACGCCAACCAGAATCTGGACACTCTCCACATATCGCGGCGCGTCCGGGAGCTCCTGTCCGTGCACAACATCGGCCAGCGGCTGTTCGCCAAGTACATTTTGGGACTGTCGCAGGGCACGGTGTCGGAGCTCCTCTCGAAGCCCAAGCCCTGGGATAAGCTGACGGAGAAGGGCCGCGACAGCTATCGGAAGATGCACGCCTGGGGATGCGATGATAATGCCGTCCTCCTCCTGAAGTCATTGATACCGAAAAAAGAGTTTGGTGACTGGGCTGCGATAGACCGGGAAGACTTTCTGGGCCCAACCACACCGCCTTTTGTGCCTGATATCGAAGTAGTCGCcgacatttttagaattttatctCGGGAGAAATTTTCGAAACGCGGCGAAATAAAGCACAACTGA
Protein Sequence
MESMDSFGGYPGVHGGSSFILREISAPQQHTRPPIKALIDEVTRLQALHESHIVQIQRLEERLEAKRQHILRLEARLEKQTDLQDAKKENNNLRSLDMSSPAVAAAAAAAAAVASESKQFQELLFERTKALAAAQSEALNKSNSNADGSSCAATTAATALAPAVVVAATTSSCHAANEPSGGGVSAPAQGQAASAGTPGGTTTSTVSVKSASASPSSVSSDTIKKFQTSARARSATSTPFRESPKDGSSPQLLTSNFQNVEQFGSFLGEEIVSSWRRGYELPPPPPQLLPSMAAAAIATSAATTTTTPIPFQQQSAKPPQIAPQPPQGPSTTALLSQLVNSTFSNSLKTDTTPAGSLNHSHQDAEKACSHHETSSTASTPNLQEGRSVEEHMNGSSGGGMTPMSLSMVKSEDNNNTLGPLPHVPAGFLPGLPFQFQDRGHFRFAEDLQLPPGSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVLLLKSLIPKKEFGDWAAIDREDFLGPTTPPFVPDIEVVADIFRILSREKFSKRGEIKHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00628015;
90% Identity
iTF_00936344;
80% Identity
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