Ehis015147.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- -
- Assembly
- GCA_949748255.1
- Location
- OX456523.1:206758154-206762651[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.8e-05 0.0051 18.6 0.1 1 23 150 173 150 173 0.97 2 13 0.015 1.5 10.8 3.7 2 23 222 244 218 244 0.88 3 13 0.0033 0.35 12.9 0.6 1 23 390 413 390 413 0.92 4 13 0.1 11 8.2 2.0 2 23 463 485 462 486 0.95 5 13 0.18 19 7.4 0.1 1 21 551 571 551 574 0.88 6 13 0.0014 0.15 14.0 2.4 2 23 625 647 625 647 0.97 7 13 0.00028 0.029 16.2 0.4 1 23 759 782 759 782 0.96 8 13 0.0021 0.22 13.5 0.1 1 23 830 853 830 853 0.95 9 13 0.018 1.9 10.5 1.7 2 23 903 925 902 925 0.95 10 13 0.24 26 7.0 1.8 1 23 1002 1025 1002 1025 0.91 11 13 0.83 87 5.3 0.5 1 20 1077 1096 1077 1098 0.94 12 13 0.015 1.6 10.8 0.1 2 23 1177 1199 1176 1199 0.95 13 13 4.9 5.1e+02 2.9 5.5 2 23 1249 1271 1248 1271 0.94
Sequence Information
- Coding Sequence
- ATGGATGATTTGGAACCTTGGAATATGTTTACCAACGATTTTATGCCCGAAGAGGCTAATTTGGAGGATGATGCGAATGAGGCAGGTGGTGGTGGTGAAGCAGGAGGAGTTGATGATATACCATTTGAAATACCCTCACCCGTACAAGATATGCTAGTTAAAGAGGAACCACAAGATCCCGTAGAAGAAATcttagatgatgatgatgatatgaATAATACTCCATTTCACTTCCTTGCCGGTACTAGCAATCATCATGTCCCTAATAAAACTGGCAATAAAGCTGAGAATGATGATGCTCTATTTGATTTTGGATTAGATTCTTCCAAttcgcaaaatatttcaaatttcaacaaaacaacACCGGCAGCTGAAaaagatttttccaatttatcaCCAGAAGACCAATACTACAATTCTATGGTTAAATTTGAAGATGCTGTAATATACATTTGTCCCGGTTGTGGTCATGAGTTTACCTCACAAGAAGCatggaaaaatcatttaaatgttGTTCATTTGTTTAATACCAAACGTGGTCTTAACTTTATACAACTTGATAAATTGTATCATGAATGTATGGAATGTCACAAACGTATTGCTATGCACAGTATGGAAAATCTGTTGAAGCACAAATTTACTCATCTACCTTATAGATGTAGTAAGTGTATGGTTTGTAAGAGACAATATAAATATCGTCAAGATCTTATGGTCCATTTGCGTATGACCCATAGGGAGGATTTAATAGCCATACTCAAAAAAGaacataaaaatcataaaaatccaCATACACAACCACAAGGTATACGTTCTATATTGAGTCGTCCTGATGGTAGTATAAATGCAACACAACCACCCAGATCTTCAAATATATCTATTGGTAATGTTAAAGAAAATGCTATAGATTTATTTGAAGGTGCCACCAATGATAAcattgaagttaaaaatgaattactTCATGAGGATGAAGATGATTTAGAAATGATGATGGGTGATGAAATCGAACCTTCGTCTCTCAAAAGACATGCTAAAGATGTGCCTACATTTCTTGAAGACGGCTCTACAAATGGTTCTGGCGTGGGTGGCGGTGAACAACAAAATCGAACTCTTCGTGCCAAAGCGTCGACTTCGGATGAAATTGATGATTCTTTGGAAGAGTATATACTATTTACTTGTCCCCAGTGTGGCACAGAATGTGAGACACAGGCTCAATGGCGTCAACATATTGATTTTGTTCATGAATTTGGCACCAGAAGGGGTTTAAATTTTAGAGAATTATTAAATCAACAAGCACAGTGTATGGGATGTAATCAGATCTTTCAAAATCCTACAATACGTAATCTACAACATCATAAATTCAGTCATTTACCGCACAAACAATGGATGAGTTGTAAACTTTGTTTTACCTCGTTTAGTGGAAATCGGGATATTATTAAACATTTAGCGACAAAACATCATTTGGTGTCGGAAAATAATAATGCAGCTACCGGCGGTGGTAATGATGAAGATAGCCAAGAAGCATTTGGTTTTGGCAATGACGATTATGATGATACTTTTGGGGCAAATGAATCTAAACATTATTTAACAGGAGGACAGGATTTATATATCTCAAAATCAGATGAACGCGATGCATTCGAACAACATATAACTTACATATGCCCAGCTTGTGGCAAGGAgtataatgacaaaaaaatatggCGCAAGCACATCGTAGATGTTCACAAATTGGGtgaattggaaaatttaaattttgagaatATTAATGAACGGCAACTAAAGTGTAGAGAATGCGATAAGATTATTACAAATGCGTATGGCATTCAAAATGCCCAACAACATCGAATGACTCATATGCAATATAAATCATTTGCCAAGTGCCGTTTGTGTCGTAAAACTTATACGGACCGTAAGGGTTTAATAAAACACTTGAGGAATTCTCACAAGTTAGGCCAAAGATATGCCCAACGCCCTTTTGAAAATACAATGAACAGTTTTAATGCCTCCACTGGAGGAGGTGCTGCTAATAACAGTTTTAAaccatttgttaaaaaaccatataaaattgCTCACTTTCCGCCCAAGGAAATAGTGAGACTATCAAACTATACATATGAAATTGTTCATTTAATTGAAGATGATTCTGACGATGAAAATGTAGGAGGTACTGGTGGATTTTCTTATGATTTTGCCAAGGGGGATGctcatttatatagaaataattCACCTTATAACTCGAAAATTCCCATTAAAGGTTCTATAGAGCAAATAACCAGGCATAAATGTGTTGATTGTGGTTCAATATTCCCTACACCACAATCATTACAAAATCATATTAAGCAGGAACATGAATTTGTAGATTATCGCGATTCTCCCTCAACTCAGCAACAAAATGATGAACAATCTAATGATACCGATGATTTATTGGTACCCAGCCGAGACGCTGATGTCCAACTAGATGAACATACTACTATGGAATGTAATTTCATCTACCTATGCCCACAATGTGGCATAAAATTTCGTGAACAGACTGTATGGCGCCGCCATATTAATGTGGAACATAATTTCGATAAACGTGATTATTTAGATTTTCGCCAATTAGATAAGTTCCGTTTTCAATGTAAACTATGCAAAGATTTAGTGACAAGTTCTAAATTGAAGGGATTACAAGATCATAAGTTTAGACATTGTCCCTATAAgttatatttgaaatgtttaCTCTGTACTCAATCTTATAATCATAAACCCAATATGATAGCCCATTTAAGGCAACGGCATAATGTTATTGAAGTTATGGATACTGGAGCTACTGGTTCCATGGATGGCTTGCAACAAAGACATTCTACTAACTCACAAAACACCAATACAAAAGAGTTTAATGATGCTCCAGCCAGGCCTATACGCAATACAGAACCTTCCAATAATACCACAAGTCGTCCTCCGGGCTTAAAAACTGTCGAAGATGTTATTTCCTTCCACAATGCTGTGGATCATGAAAGTATTACCTACCACTGTCCATCTTGTAATGAAAATTTCGATTCACACGTCTTTTGGCGTAAACACATAGTAGAAGAACATAATCTTAATAGCCGAGAAGGTTTAAATTTCCGACAATTGGATGAACATCATTACATATGCTTGCAGTGTTATAAACGTGTTACGGTGACACATACCAAGGGAGCTATCGGCCAATTACAGTCACATAAATTTAGACATTTACCCCATAAATCATTCCGTTGTACTGCCTGTGAAGGAGAATTTGTTCGcaaacaaatgtttttcaaaCATTTGGATAGAAATACTAATAAATGTTCTGGCATAAATCCTGATAATGCCAACTTAAGTAAAATGGCTGATaccacaacaacaaatcttGATGAAACAGCGATATTACAGCGTGAGTCTACATTTAATGAATCGTCTACTAATAATTCGACATCTACAAAATTCTCTTGGCCTTCACGTTCTTCACTGCCAGCTCAACCTTCGACCACTGAAGCTATTAATGAGAATCAGGGctgttttactttaaattgccCACAATGTGGTACTGATTTTGAAACGACTCGTGGTTGGCGTGAACATATTAATATTGAGCATAATCTTAACAATCGCACGgtattgaatttcaaaaaaatcagtcCTAAATTACATGTTTGTTTAGAGTGTAATGAGCATGTTAATGGTCGTAAACTGAGAGATCTTCAGGtacataaatttaaacatttacccTATGGAGCATATCTCCATTGTCGCTACTGCTCAATGAAGTATTTCCATATAAGTAATATgcaagaacatttaaaaaataagcatcCCCATATGGTGCAAAAAATGAAAACCTATGATGAAGATTGTGTAACACTCGATGAAGATGAGGAAGATGTCACAGCCGTTGGTATGTCAACTGGCGATAATGATCTGGACACAAGTAATCCTTGTTTAGAAGATATAGACGATATGCAATTGTTAGAGGCAGAGGCAGACATTGAAGAAGTTGATCCGGATAATGTTGAATCAGAAGAACAATATCTTTTaggttaa
- Protein Sequence
- MDDLEPWNMFTNDFMPEEANLEDDANEAGGGGEAGGVDDIPFEIPSPVQDMLVKEEPQDPVEEILDDDDDMNNTPFHFLAGTSNHHVPNKTGNKAENDDALFDFGLDSSNSQNISNFNKTTPAAEKDFSNLSPEDQYYNSMVKFEDAVIYICPGCGHEFTSQEAWKNHLNVVHLFNTKRGLNFIQLDKLYHECMECHKRIAMHSMENLLKHKFTHLPYRCSKCMVCKRQYKYRQDLMVHLRMTHREDLIAILKKEHKNHKNPHTQPQGIRSILSRPDGSINATQPPRSSNISIGNVKENAIDLFEGATNDNIEVKNELLHEDEDDLEMMMGDEIEPSSLKRHAKDVPTFLEDGSTNGSGVGGGEQQNRTLRAKASTSDEIDDSLEEYILFTCPQCGTECETQAQWRQHIDFVHEFGTRRGLNFRELLNQQAQCMGCNQIFQNPTIRNLQHHKFSHLPHKQWMSCKLCFTSFSGNRDIIKHLATKHHLVSENNNAATGGGNDEDSQEAFGFGNDDYDDTFGANESKHYLTGGQDLYISKSDERDAFEQHITYICPACGKEYNDKKIWRKHIVDVHKLGELENLNFENINERQLKCRECDKIITNAYGIQNAQQHRMTHMQYKSFAKCRLCRKTYTDRKGLIKHLRNSHKLGQRYAQRPFENTMNSFNASTGGGAANNSFKPFVKKPYKIAHFPPKEIVRLSNYTYEIVHLIEDDSDDENVGGTGGFSYDFAKGDAHLYRNNSPYNSKIPIKGSIEQITRHKCVDCGSIFPTPQSLQNHIKQEHEFVDYRDSPSTQQQNDEQSNDTDDLLVPSRDADVQLDEHTTMECNFIYLCPQCGIKFREQTVWRRHINVEHNFDKRDYLDFRQLDKFRFQCKLCKDLVTSSKLKGLQDHKFRHCPYKLYLKCLLCTQSYNHKPNMIAHLRQRHNVIEVMDTGATGSMDGLQQRHSTNSQNTNTKEFNDAPARPIRNTEPSNNTTSRPPGLKTVEDVISFHNAVDHESITYHCPSCNENFDSHVFWRKHIVEEHNLNSREGLNFRQLDEHHYICLQCYKRVTVTHTKGAIGQLQSHKFRHLPHKSFRCTACEGEFVRKQMFFKHLDRNTNKCSGINPDNANLSKMADTTTTNLDETAILQRESTFNESSTNNSTSTKFSWPSRSSLPAQPSTTEAINENQGCFTLNCPQCGTDFETTRGWREHINIEHNLNNRTVLNFKKISPKLHVCLECNEHVNGRKLRDLQVHKFKHLPYGAYLHCRYCSMKYFHISNMQEHLKNKHPHMVQKMKTYDEDCVTLDEDEEDVTAVGMSTGDNDLDTSNPCLEDIDDMQLLEAEADIEEVDPDNVESEEQYLLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00893428;
- 90% Identity
- -
- 80% Identity
- -