Basic Information

Insect: Eustalomyia histrio
Gene Symbol: -
Assembly: GCA_949748255.1
Location: OX456526.1:9067433-9076215[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.052 5.4 9.1 4.8 1 23 227 249 227 249 0.98

2 7 0.00039 0.041 15.8 4.7 1 23 682 704 682 704 0.99

3 7 8.3e-05 0.0088 17.9 0.4 1 23 710 732 710 732 0.98

4 7 1.2e-05 0.0013 20.5 0.8 1 23 738 761 738 761 0.95

5 7 4.6e-07 4.8e-05 25.0 1.6 1 23 767 789 767 789 0.98

6 7 0.00013 0.013 17.3 3.3 1 23 795 817 795 817 0.99

7 7 2e-05 0.0021 19.9 1.5 1 23 823 845 823 845 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.052	5.4	9.1	4.8	1	23	227	249	227	249	0.98
2	7	0.00039	0.041	15.8	4.7	1	23	682	704	682	704	0.99
3	7	8.3e-05	0.0088	17.9	0.4	1	23	710	732	710	732	0.98
4	7	1.2e-05	0.0013	20.5	0.8	1	23	738	761	738	761	0.95
5	7	4.6e-07	4.8e-05	25.0	1.6	1	23	767	789	767	789	0.98
6	7	0.00013	0.013	17.3	3.3	1	23	795	817	795	817	0.99
7	7	2e-05	0.0021	19.9	1.5	1	23	823	845	823	845	0.98

Sequence Information

Coding Sequence: atggaaTTAAACGAATATAATGGCTATGAAGACCATTGCAAAAATACAGAAATAgatttaaaaacaaaatttgaacaaaaggATTCTCATAATATCAACACCATGGAGCATATAATGCAACGCAAGGAGCAAGAATATATAGATCAAACACTGTTAGCACCAGAATATATGCGTGATCCCAATCATTTCATTAtggatttaataaattttcccaAGACAGAATCTGCGCCACACAATAATGACGATCATCTTCCCACAGATTTACATTTTCATAATACTCTATTTCCCGTGACGACAGACAGCCATCAACATCATTCCAATGAATCACGCAAAACACCACCCACTTCAGTTTTTATGCCACTCAATAATGATTTTCTAATGCCGGTACAAAAATCTTACAACACTGCAGTGGACCCTGTAGGCAGTGTTGAAGGGAATGGGGTAAAAGTTGTACAACAGTTATTGCTAACAGAAACTAATGTGGCATTGGATgATGGCTCCATCGATGATGTTTGCGACATCTCACGTTTCGATTCACGCAAAGTTTTGCCACACAAAAAACGCATTTCACGTAAATTGAGAATCAATCATTGTGATTCAGATCTTCAATTAAATGTTCCCCTCGATGATCATAAATTGCCTCATGTTGAACAATTAGTGAGTCGTAATGTTCAACAATTTCGTTGTGAACTTTGTGGTCATACCACTTGTTCTCAGCTAGAATTTTTTGCTCATCTCAAACAACATTATGAACCCTCTACCCCCGATACAATACTGGCCGCTATGAAAACATCATTAGAGGCTTTGGGTCCGGAAAAAAGTAAAGAGGCTACAAATTTAtgtgtaattaataaaaagaCTGATGGACTTGATCAAGTCTTCCAAGATGTACATTTTCCTTTTGACAACTTTCCACAAAATGAGGCTGTAGATGCAGTGCGGGTAGTAATGGAACCACAACATCATGTGGATGCAGTAGACATGAAAATGGTAAATAGAACCATGGATGAAGCAATAAATGCTACTACCTCAGCTTTACAACAACATACACAacctcaacaacaacaacagcagcagcaacaacaacaacaacctcaacaccagcagcaacaacaacagcaacaacaacagcaacaacaaccacaacaacaGCTACATCCACCTCAAACAACACAAAATTTAGTACCCGAAGAATTTAGTGATACAGAAGATATGCTAGAAGGTATCAGGGATAAAGTTCTAATAGAAGATACATGTGATACCATGGACCTAATGACACCCACCTCAAATGGTGTTAGACCTCATTGGTTTACAAATACTTGTTTTAATGGCATGGATTTAAAACCCAAACCATTTTGTGATGTTTTATTTTCGGGACAATTTGCTCCCATGTTAAATACCGAAACTACGGCACCTATTATGCAACAAGATTCACATCTAACAGATAACAAATTACTGGAAAAAGAAATGCATCAACCACCATCACATCTACAACCTCCACCACCTCCACCACCTTCACATCAAACTCATATTTCTTCTCAGCCTCAGgctcctcctcctcctccttcTCTTCCTCCTCCTCCTTCTCTTCCTCAACCAGTACAACATGCCACAGATTTACGTTTACATTTTTCTCATCCCGAACCGACCTTAAATCATGAACCATCATCACTAAATGATCAGCATAATTTACAAGCacaacatataaaaattgaaaatacccCTCCTACAGACATTCCCGATATGTCCAATTTCCAAAATTCAGAAAATACATTAAGTGGTAATGATCACGAACATCACTATCATAATTCTCAGCAAAGCGAAGAAACTGACCAGGATTATAATTCTCATATAGAACAACAAGAGCGTGAAGCCGAAGCTGAGTTTTATAATCGTCAATATAAAGTTGATATAGACGACGAAGAATATGATGATGAAAGTGTTTATGAGGAAAACCCTGAAAACAACGAAGAATTGTCCTGGGaaaatgatgacgatgatgacgatgatgggGAAACAACTGTAAATGGTAAACGTAAAAAATATGTGTGCAATAAATGTCAACGCATTTTCAATTCCTGCAATGCTCTCAAATATCATTATCGTACACACTCCGGCTTAAGACCACATCAGTGTGGCGTCtgcaataaatcattttttgctATTGGTGCCTTAAAAGCTCATATCCGAACGCATACGGGTGATAAACCATTTGATTGTAACTATTGTGATCGTAAATTTCGTCAATGGGGTGATTTAAAATATCACACCATCTCCATACACAGCACTGAAAAGAATCATCAGTGTGAGTTTTGTGGCAAGGCGTTTTCCCGTAAATATTCCCTAGTAGTGCATTTGCGTATTCACACGAGCgaaagaaattataaatgtgaattttgcacaaaaacatTTCGTGCTAGCACTTATCTGCAAAATCATCGTAAAATTCATACAGgtGAAAAACCTCATGAGTGTGatgtttgtttgaaaaaatttcgtgTTTCTGGTGATTTAAGGCGTCATCAGCGTATACATGAACGCAAAAGACTTAAACAGGATTTATTGGAAAATCAAAATTCTTCTAAAGTTAAATCCTCAGTCTGCTTGTAG
Protein Sequence: MELNEYNGYEDHCKNTEIDLKTKFEQKDSHNINTMEHIMQRKEQEYIDQTLLAPEYMRDPNHFIMDLINFPKTESAPHNNDDHLPTDLHFHNTLFPVTTDSHQHHSNESRKTPPTSVFMPLNNDFLMPVQKSYNTAVDPVGSVEGNGVKVVQQLLLTETNVALDDGSIDDVCDISRFDSRKVLPHKKRISRKLRINHCDSDLQLNVPLDDHKLPHVEQLVSRNVQQFRCELCGHTTCSQLEFFAHLKQHYEPSTPDTILAAMKTSLEALGPEKSKEATNLCVINKKTDGLDQVFQDVHFPFDNFPQNEAVDAVRVVMEPQHHVDAVDMKMVNRTMDEAINATTSALQQHTQPQQQQQQQQQQQQPQHQQQQQQQQQQQQQPQQQLHPPQTTQNLVPEEFSDTEDMLEGIRDKVLIEDTCDTMDLMTPTSNGVRPHWFTNTCFNGMDLKPKPFCDVLFSGQFAPMLNTETTAPIMQQDSHLTDNKLLEKEMHQPPSHLQPPPPPPPSHQTHISSQPQAPPPPPSLPPPPSLPQPVQHATDLRLHFSHPEPTLNHEPSSLNDQHNLQAQHIKIENTPPTDIPDMSNFQNSENTLSGNDHEHHYHNSQQSEETDQDYNSHIEQQEREAEAEFYNRQYKVDIDDEEYDDESVYEENPENNEELSWENDDDDDDDGETTVNGKRKKYVCNKCQRIFNSCNALKYHYRTHSGLRPHQCGVCNKSFFAIGALKAHIRTHTGDKPFDCNYCDRKFRQWGDLKYHTISIHSTEKNHQCEFCGKAFSRKYSLVVHLRIHTSERNYKCEFCTKTFRASTYLQNHRKIHTGEKPHECDVCLKKFRVSGDLRRHQRIHERKRLKQDLLENQNSSKVKSSVCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00893143;
90% Identity: -
80% Identity: -