Ehis026319.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- -
- Assembly
- GCA_949748255.1
- Location
- OX456525.1:50581295-50594907[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.56 59 5.8 0.4 2 23 236 258 235 258 0.94 2 18 0.18 19 7.4 0.5 1 23 264 286 264 286 0.97 3 18 0.0032 0.34 12.9 0.7 3 23 294 315 294 315 0.97 4 18 0.048 5 9.2 0.5 2 23 331 353 331 353 0.93 5 18 0.0043 0.45 12.5 3.7 1 23 359 381 359 381 0.98 6 18 5.3e-05 0.0056 18.5 3.3 1 23 388 410 388 410 0.97 7 18 0.00021 0.022 16.6 1.2 1 23 416 438 416 438 0.98 8 18 0.0045 0.47 12.4 0.9 2 23 486 508 485 508 0.94 9 18 7.3e-05 0.0076 18.1 2.8 1 23 514 536 514 536 0.99 10 18 9.4e-06 0.00099 20.9 5.4 1 23 543 565 543 569 0.97 11 18 3.5e-05 0.0036 19.1 0.8 1 23 571 593 571 593 0.98 12 18 0.021 2.2 10.3 0.5 2 23 623 645 622 645 0.96 13 18 0.022 2.3 10.3 0.1 1 23 651 673 651 673 0.98 14 18 0.00036 0.038 15.9 3.2 1 23 676 698 676 698 0.98 15 18 0.52 54 6.0 3.8 1 20 704 723 704 725 0.93 16 18 0.38 40 6.4 1.6 2 23 1024 1046 1023 1046 0.94 17 18 1.5 1.6e+02 4.5 2.0 2 23 1093 1114 1092 1114 0.97 18 18 0.24 25 7.0 6.0 1 23 1140 1162 1140 1162 0.98
Sequence Information
- Coding Sequence
- ATGAACGATATTTTGTGTCTAAAcaaagaaattataataaagGAGGAAAATTCGCCCGAAGATGAACATGACGGTAATGACCCCCAGGATATATTGCAAGTTAAAGCATGTGAGCTGGATAAAGGTCAATATAATTCCAATCAAACTGAAGATAACTTTAATACAAATGACAACCAACAAACGATACAGGAGTTTAATAGCGACGAAGATCTAGCTGCAGTACGAACAAAACTAGCAATAGATCAACAAAACCCAACACATTCACATCAAATGATGCAGGATTTTGATGCTGATGAAGATTTATCTGAAATACAGAAAATACATGTATTACAAAATGATAATAACAAGCAAATATCTATTGAAGAAAATGTGGAAGAAGATGTTAGTTTAACGAATACTCCCAGTATAAAACAAGAAGAACATAAAACGACTGCCTCAGACTTACAAACTGATTTGGCAATGAACAGTGCTATGGATGTAACAAAAACTGAATATGTAGAGGAAGGACAGTTATTGGAAGTCCAAAATCAgggagaaatttataaaattgaatatattgATGAACAACATAAAGTGGAACAATTTGAGAATAATTCCAATACAAATGATACAGAACATTTACAGATGCCTGAcacaaatttaacaaatgaaGATCAAACAATTACGGATACAAAACAATATAGACACATGTCAACAGTGGATACCAAATGTGCCGTTTGTCACCaggaTTTTGCTATTCGTCAAGATCTTGTTGATCATGTCCAACAATATCATCCATATGCTAAAGcatttaaatgtattatttgtTCTATGCGTTTTTCCAATATACTGTCCGTAGCACGCCATAGAAGAGTTCATAAAAATATGCCCGGGACTGGTTGCCCATATTGCTCTAAATCCTTTTTGAATCTAGATGATTATAAACGTCACATCACAAAGGTACATTCGGTTAAAATTGCCAACAATCTAAACCAACCAGCAGTTGATAGGAAATGTGCTATATGTCATGAGGAATTTGTTTTACGTCAAGATCTCATTAAACATGCTCAAGAATTTCATCCGAAAGAAAAAGCATTTAAATGTACTATTTGCTCGATGgtttttacaaatatacatTATATTTCTCGTCATCGAAGAAATCATAAAGTATTGCCTAGAAAATATAATTGTGAATTCTGTTTCAAATCCTTTAGAGATCTAGATAATTTTAAACGTCACTTGAAATTGCATAATGTGGGAACTAGGTACCAATGTTCGTTGTGTAATGTATTCTTTCGATATAAAGATTCGTTGAGAAATCATGAATTGGTGCATATGGCTATAGGCGATGTAGAAAGGACACCGATTGAATCTAATTCAGGAAATAAAACGATTGAAGGCAAAAGCgataaaaattatgaagaaaTCCGCACTATACAAAACCACCATTTAAAACCACAACGCGCTGTTGAAACAAAATGCGCCGTTTGTAAACAGGAATTTAAATATCGCCAAGACCTAATGAAACATGTCCAACAGGAGCACCCCAATGACAGAGCGTTTAAATGTAGTGTTTGCCCTAGGGTTTTCAAGAATATACATTATTTATCAACACATCGaagaattcataaaaatttaccaagaaaaCATGTTTGTAAAATATGCTCCAAGACTTTTAGAGACCAAGATAATTTTACTCGTCATTTGAAACTGCATATGAGAACACATGTCTATGCCTGTAATTTATGCGATAAATCTTATAAATATccaatttctttagaaaatcataaaaaaacccACTTGGAAAAGCCATCGAAAGCTAAAGaagataaagtaaaaaaaatgagaaaacccATTTCTGCCAATTTTCAACGACCCGTTGAAATGAAATGTGCCGTTTGTCAACagAAGTTCGATTATCGCTTTGAGCTTGTTAATCATGTCCAGTCAAATCATCCCAATGCAAAAGCATACAAATGTGGCCTTTGTCCCATGGTGTTTGCCAATATAGTAGCGGTTTCACATCACAGAAATATTCATAAAGTTTTTGAATGTAAACTTTGTTCCAAGTCATTTACATGCAAAGAAGATTTAAAACTACACATAAGGATACATACTAAAGAACGACCCTACTgttgttttatatgtaaaacaaactataaacgAAGAGATTCTTGGTTGAAACATAAAACAAGTTACTGCAAATCTCTCAAGGACAACAGTGGTGAAAAAACTGAAAATCTAAATGTTGAAATTAACAAGAGTTTGGAAACTTTGCCAGATATTAATCTGCCAACGAACTCAAATGTTGACTGCAAAAACGAGTTGGAAATGAAGTCCGAATATATTGAAGAAGATGAAAAGATTCTACCAGTTGAAAGcgataaagaaattgaaaaaagtgatcAATTGGAAGATAATTTCAATACAAAGGTGgacgatgataatgatgatgatgatggctctgtatttgaaaaaaatacaaaccagAAGAAAACAAGACCAATGCGTCTATCAgcattgaacaaaaaatatacaggaCTGGAAGATAATTCCGATACAGATGattctcaaaaactaaaaagaacTAAGAAAAAGGATGATGATGATTATTGTAATGATGATGAAGAGGAGGAGGAAGATGAAgaggatgatgaagaagaagatggcgaagaagatgatgatgatgaaaaggATGATTATAATGTAGATAATGATGCTGACTTTggatttggtaaaaaaacaaatcagcAAAAAACACGAACAAAGCTTTCGACAAAGAAGGATGAAAACATTGCAGTACAGGAAGATAATTCTGATACAAATGATTCTCAACAAATAATATTGACAGATGAAGATGATAACGAAGATTATAATCATGATAGTGAAGCAGATGATTATGATTATAATgatgaaaatgattttattttgcatgaacaaacaaataaaaaaactcattCAATGTTAGCTGAGAATACAAAATTATCCGGACAGGAAGATAATTCCAATTctcaacaaataataataacagaaaatgaTTTCGATGACCTGGTGTCAGAACTCGAAAATAACATGTCAGCTGTCGACAAAAAATGTGCTGTTTGTCATCAGgAAGTTGAATCCCGCAAAATGCTAACTAAACATGCTGAGAAATACCATCCCAATGAGGATGTTTTTAAATGCAATGTTTGccttttgctttttaaaagtaTTCATGCTATATCAAGTCATgaATTTCCTGCTCGCCATGAACTTATTAAACATACTAAAGAATCTCATCCTAATGAAAGAGCTATTAAATGTGCATTGTGTCCTAGGCTTTTTAAGAGTATAACTTGTATATCATCTCATAGAAGAAGTCATAAAAATATGCCCAagaaatatATCATGTCGGAAGAAGCATGTTCGAGTGCGGAGTTTCAGGATATAAAACGTAAACATGTGTGTCCTTATTGTTGCCTAACTCTGACACATGAAGATGATTTCAAACGTCACTTAAACACACATTCTGCTGCTTTGGAGTACAAACCACAACTAGTTGTTGAGAAGAAATGTGCAGTTTGtcaaaagATATCTGATAGCGAATGTGAGGCTACATAA
- Protein Sequence
- MNDILCLNKEIIIKEENSPEDEHDGNDPQDILQVKACELDKGQYNSNQTEDNFNTNDNQQTIQEFNSDEDLAAVRTKLAIDQQNPTHSHQMMQDFDADEDLSEIQKIHVLQNDNNKQISIEENVEEDVSLTNTPSIKQEEHKTTASDLQTDLAMNSAMDVTKTEYVEEGQLLEVQNQGEIYKIEYIDEQHKVEQFENNSNTNDTEHLQMPDTNLTNEDQTITDTKQYRHMSTVDTKCAVCHQDFAIRQDLVDHVQQYHPYAKAFKCIICSMRFSNILSVARHRRVHKNMPGTGCPYCSKSFLNLDDYKRHITKVHSVKIANNLNQPAVDRKCAICHEEFVLRQDLIKHAQEFHPKEKAFKCTICSMVFTNIHYISRHRRNHKVLPRKYNCEFCFKSFRDLDNFKRHLKLHNVGTRYQCSLCNVFFRYKDSLRNHELVHMAIGDVERTPIESNSGNKTIEGKSDKNYEEIRTIQNHHLKPQRAVETKCAVCKQEFKYRQDLMKHVQQEHPNDRAFKCSVCPRVFKNIHYLSTHRRIHKNLPRKHVCKICSKTFRDQDNFTRHLKLHMRTHVYACNLCDKSYKYPISLENHKKTHLEKPSKAKEDKVKKMRKPISANFQRPVEMKCAVCQQKFDYRFELVNHVQSNHPNAKAYKCGLCPMVFANIVAVSHHRNIHKVFECKLCSKSFTCKEDLKLHIRIHTKERPYCCFICKTNYKRRDSWLKHKTSYCKSLKDNSGEKTENLNVEINKSLETLPDINLPTNSNVDCKNELEMKSEYIEEDEKILPVESDKEIEKSDQLEDNFNTKVDDDNDDDDGSVFEKNTNQKKTRPMRLSALNKKYTGLEDNSDTDDSQKLKRTKKKDDDDYCNDDEEEEEDEEDDEEEDGEEDDDDEKDDYNVDNDADFGFGKKTNQQKTRTKLSTKKDENIAVQEDNSDTNDSQQIILTDEDDNEDYNHDSEADDYDYNDENDFILHEQTNKKTHSMLAENTKLSGQEDNSNSQQIIITENDFDDLVSELENNMSAVDKKCAVCHQEVESRKMLTKHAEKYHPNEDVFKCNVCLLLFKSIHAISSHEFPARHELIKHTKESHPNERAIKCALCPRLFKSITCISSHRRSHKNMPKKYIMSEEACSSAEFQDIKRKHVCPYCCLTLTHEDDFKRHLNTHSAALEYKPQLVVEKKCAVCQKISDSECEAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -