Ehis002220.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- -
- Assembly
- GCA_949748255.1
- Location
- OX456523.1:53809381-53820903[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00049 0.051 15.5 1.2 1 23 198 220 198 220 0.95 2 15 0.069 7.2 8.7 1.2 3 23 228 248 226 248 0.95 3 15 0.00012 0.013 17.3 0.6 1 23 433 455 433 455 0.98 4 15 0.007 0.73 11.8 0.4 1 23 461 483 461 483 0.98 5 15 8e-06 0.00084 21.1 3.9 1 23 515 537 515 537 0.99 6 15 0.018 1.9 10.6 0.3 1 23 562 584 562 584 0.94 7 15 0.38 40 6.4 0.8 1 23 590 613 590 613 0.95 8 15 0.57 60 5.8 0.3 5 19 624 638 621 639 0.91 9 15 0.00033 0.035 16.0 5.6 1 23 648 670 648 670 0.97 10 15 0.075 7.9 8.6 1.7 2 23 676 697 675 697 0.97 11 15 0.00011 0.011 17.6 0.2 1 23 706 728 706 728 0.98 12 15 0.0099 1 11.4 0.2 3 23 736 756 734 756 0.97 13 15 0.00012 0.013 17.4 0.5 1 23 762 784 762 785 0.95 14 15 0.0035 0.37 12.8 0.0 1 23 795 817 795 817 0.97 15 15 0.0051 0.54 12.3 0.0 1 20 1416 1435 1416 1438 0.93
Sequence Information
- Coding Sequence
- ATGGATAATCATGTTTATGGTGGTATACAGTGGATACAACACCACTCTGCGAATCATTCCTCCCATGTTGGAGATATGAAAACTGCAGGCCAGTTGATAATCGATCCACAGCCTCCACGTGAAGAAGATCTTATGGCAAGAGCCAACTCTACATCGGATTATATGGCCACAGAAGATGAGGGTGATTCAACAAATATTGATCAAATAGCTGcagagaatttaatatttatggcCCGTGACGGACAAATGGTAACAGATATTATAACAAATGCTACAACAGATAAGAATGGAACTTTGGTTGTGACTGCAAGTGATGGCGAGCAAATCGATTGTCAAGTCATTATGCAACAGGCCGCGCTAATACAACAGCATGAAGATGCTGGGGGTGGAGTGTATAGTGTAGAACATTATACGGAGAATACACCGCAGATGGTGACTGAAGAAATTATCACAGATGATTGGGTGCAGCATCAAGGCGAAGAaagAGTTGAAATACCGGCCGAACAAATTATTGGTTCCAGCTCTCAAATATTATTGGACATTGAAGTTCCCCTACCAACAGTACAAGATGAATACACAGCCTTACGTCCATATCCCTGTGATTTTTGCAGTAGACGTTTTCGCAAAAAAACTAGTCTTTTAAATCATATGGTTGCCCATCAAACAGATCGTCCACATTTGTGTAAATTATGTGGTGCTAGATTTCTGCGGCGACAAGATCTTATTAATCACTTAAAAGGTCATGCCGAAGAGCCTGCAGAACCACAAATGGATGATAGtgattTCATCAATTTTGTTACCGATACCACTTCATCATCACAACGTACCCCCAATGATCATTATTATGAACAAGATTGGAGTGTACCTGAAGATTCTGTTACTATACCAACAAAATCTAATCGCAAACAATTGTACCATCCACCACAAGAAATTATTACCTCAATTTCTAATAATCAAATTATGATGGAAAATACTTTAACATCTTCCTCAACGATATCTGGTACACAAATTTCAACAGCAACACCACCACCAACTAGAGGTCGCATAAGTCGTCTTAAACCTAAAGAGGATTCATATATTGTTGATGTACCAAATAATTGTACTACAAATACTAATTTTACAACTTCGTCATATAGTATTGTGGAATATGATGCATTATCTGATGCTACAGCTGCTGTTAAACTTCCTCAGGATAACCCCATACCCGCCTTAAAATCGGAACATCATCAACAACGACAACAACATTCACAACAAAATCTGGCCATACATTATCCCATCATAGATGATAATAAACCGTTTGTTTGTCAACAATGTGGTTTGGCATTTTCCAGAGAAAAAGCCATGCAATCGCATACAAAGACCCATCGTAATGATTCACCTTTTAAATGTCCCCAGTGTAATGAACTCTTTTGGGATCAAACTAGTCTACAAGATCATCAAAAGGCCCATCAATTTGAAGAAAGTAATTCTGAATATGATCCCAATGAAGGAGAAGATGAAACACAATCAGAATCCGAGTCCGAACAACAATTATATGGAGAATATTATTGCAGTGAATGTGGCATGTCTTTTCATCGACAAGATCTACTAAAGAGACATACTAAAACACATACGAAAGGAAATCATAATATCAATGGACAGTCGTATAGCAACAGTGGTGTTATAGATGATAATAAAGATCAACATTGTTGTAATACATGTGGTGAAACATTTGCCGAAGCTTTAGATTTATTAGCACATGCTGAAATACATGCCCGATACCCGCCTTTTAAATGCATTTTATGTGGTGAGTCTTTCTTTGAGGAAACCACAATTAAAAAACATCTACAATCTCAACATGCCAACGAAATGACAGACAATTCTTGTATATTATGCGGCAAAGAATGTCGTGATCGTAAGGCTTTAATTAAACATGCCTGGGATCATTCGAGAGAAAAATGTCACTCCTGTTCCAAGTGTGGCAAAAATTTCCACAATAAAGCACGTCTTAAACGTCATATGGCTTCACATCGTGATAAGTCTGTACAATGTGATGTCTGCCATGAAGAATTTCCCGATGGTCGTACACTATCGAATCATCGTCATTCTCACAGTGCTACCTCGGCAGGAAAGCTATTTCCTTGTCTGGAATGCGGTAAAACTTTTGGGTCTCGTAGTTCACAACAAATACATGTTCGTATACATACGGGTGAGAGACCATATGGTTGTCGATTTTGTTGGAAAGCCTTCGCCGATGGTGGTACCCTTCGCAAACATGAACGTATTCATACAGGTGAAAAACCATATGCCTGTTCGGTGTGTCCAAGAGCTTTCAATCAACGCGTTGTTCTCCGAGAACATATACGGTCGCATCATTCGGGTTTAGATGCTAAACGTGGTACTTATTATTGTACTGTTTGTGGTGCTGAATTAACATCGTCCGGAGATTTGATACAACATTTAATACAGCATAGTGATATGAATACAGCCATGCAAAGACAACCAGTGACTGGCCCCCGAAAATATAAACGTAGACGTAAGTTGAAACCTCATGAAATTGCCCGATTAAAACGTGAGGGAAAACACAATGAAGATGCTGGCAGTGATATTGATATTTCTGATTTAGACATGGATAATGTAGATGATTTACTCGCAATGACAGACAGCAATACTGCAACCGAAAATGCAACAAATCATCATGAAAATAATCTACAAGACAAAACAGAGAAACACAAAAATTCACATacagaaaacaacaacaacaacaacaatcactaTAAGAATAAATCCTCCTTTTCCATAGCAAATTCTAATAAAACAAAGCATGGAATTATACTGGAACAAGAAGATTTTGAACTAGATGTTGGAATTGATGAAGATAATAACAAACAACGATATAATTCCACTAGCAGTGATAAAATATGgacaacaaaacaaacaaatgaaGAGACCTATAAATCATTGCTATCAAATTTAGAAACTACCCTTCAAAGTATAGATACATTAGTGGTAGGACCGTCATCATCCTCAAAACCTTTAGAAACAAAAGTAAATTCTAACAATCACCAGACGCTACAGCAGACAAAACGTAAAATGAAACAAGAATCATCTTTGACAGCTCAAAGAACACAACAAGTACAAATTAAACGGGAAGATAAAGAGGCAGGTGGTTCCACTactagcagcagcagcagcagagGTCGTAAAAGTAAAACAGACAAGTCGACGACATCAAAACAATCCAAAGGTCCTCAAATGATACATACAGAAAAATATACCGTTCCTTCAAATGATGTAGGCGGAGAAGGAACGGGAAGaggaaaaaagaaatcaaaatcaattataacccgtaaacaaacaacaaatattgATTTATTGCCAAAAACAGCAGCTATTTTAGATGATTATGACATAATATCACCTGCTTTGCAGCCACCAAAACAAATAAGTTCTAGTCCTTTACATATAAAACAAGAGCAAGACAATCATCTGCAacaccatcatcatcaccatcaccaTCCACAAAATCATCACTTAATGAAAAATCCTCCACACTCTAATCATACAACATCAGCCCGAACACAGTCTACGACCCGCCATACAAATGCCAACGATCTATATGATGCCCATTTATTGTTGGAAGCTTCTGGATTACGTAACGACTTAGATGAGATACTTAGATCCCCTTTAAAATCAGATAAATCTCATGAACGACAACGTTTTACCAGTGAGTCGTCCACACAATTTTTAGCCGAACAATCAGAAGAAGaacaacatttaattaaaatcgaaCCTACATCACCGGATTTACGAGAAATTGTCAATGGTGCCAGTTCTTTGAATACATCAGCAACACAACACGCTATCGAATTGGCAGTAGCTACCACCACCAGCCCTCAAAAATCCAGAAAAACTAACAAAACCTCCAGATCCCAGAGAACAGCCAATTCAAAtcgaaaatatttagaatttgcCGATGATTCTGACATTGCTACGACAAGCAGCTGCAACGTTAAAAGATCTTTTACGAATTCGTCCCCTTCCAATTCAAAGTCTGCTCGAACGGAACCAGCTGAAACATTCAAATCTGTACAAAATTCTTCATCTTACTTAGACTATACAATGGTGGATGCCTTTAATACGGTAACAAGTTCCTCAtcgaataataataattcatttgcCTCCATTTCGGCTGTGGTATCAGCAGCAGATGCTTCGGCTGCTGCGCAACAAAATCCCACACCTGATCGTAAGTTAGAACGTTACTATGAGTGTGAAATGTGTTCGGCCTCATTTTCAGATCGTGCTCAACTCTTGGATCATGTACCCATACATATATAG
- Protein Sequence
- MDNHVYGGIQWIQHHSANHSSHVGDMKTAGQLIIDPQPPREEDLMARANSTSDYMATEDEGDSTNIDQIAAENLIFMARDGQMVTDIITNATTDKNGTLVVTASDGEQIDCQVIMQQAALIQQHEDAGGGVYSVEHYTENTPQMVTEEIITDDWVQHQGEERVEIPAEQIIGSSSQILLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLLNHMVAHQTDRPHLCKLCGARFLRRQDLINHLKGHAEEPAEPQMDDSDFINFVTDTTSSSQRTPNDHYYEQDWSVPEDSVTIPTKSNRKQLYHPPQEIITSISNNQIMMENTLTSSSTISGTQISTATPPPTRGRISRLKPKEDSYIVDVPNNCTTNTNFTTSSYSIVEYDALSDATAAVKLPQDNPIPALKSEHHQQRQQHSQQNLAIHYPIIDDNKPFVCQQCGLAFSREKAMQSHTKTHRNDSPFKCPQCNELFWDQTSLQDHQKAHQFEESNSEYDPNEGEDETQSESESEQQLYGEYYCSECGMSFHRQDLLKRHTKTHTKGNHNINGQSYSNSGVIDDNKDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCILCGESFFEETTIKKHLQSQHANEMTDNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAKRGTYYCTVCGAELTSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIARLKREGKHNEDAGSDIDISDLDMDNVDDLLAMTDSNTATENATNHHENNLQDKTEKHKNSHTENNNNNNNHYKNKSSFSIANSNKTKHGIILEQEDFELDVGIDEDNNKQRYNSTSSDKIWTTKQTNEETYKSLLSNLETTLQSIDTLVVGPSSSSKPLETKVNSNNHQTLQQTKRKMKQESSLTAQRTQQVQIKREDKEAGGSTTSSSSSRGRKSKTDKSTTSKQSKGPQMIHTEKYTVPSNDVGGEGTGRGKKKSKSIITRKQTTNIDLLPKTAAILDDYDIISPALQPPKQISSSPLHIKQEQDNHLQHHHHHHHHPQNHHLMKNPPHSNHTTSARTQSTTRHTNANDLYDAHLLLEASGLRNDLDEILRSPLKSDKSHERQRFTSESSTQFLAEQSEEEQHLIKIEPTSPDLREIVNGASSLNTSATQHAIELAVATTTSPQKSRKTNKTSRSQRTANSNRKYLEFADDSDIATTSSCNVKRSFTNSSPSNSKSARTEPAETFKSVQNSSSYLDYTMVDAFNTVTSSSSNNNNSFASISAVVSAADASAAAQQNPTPDRKLERYYECEMCSASFSDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00893036;
- 90% Identity
- -
- 80% Identity
- -