Ehis026322.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- ECU03_0790
- Assembly
- GCA_949748255.1
- Location
- OX456525.1:50600510-50605917[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 5.2e-06 0.00055 21.7 3.6 2 23 131 152 130 152 0.97 2 16 6.4e-05 0.0067 18.2 4.8 1 23 158 181 158 181 0.98 3 16 0.0027 0.29 13.1 2.4 1 23 227 250 227 250 0.96 4 16 0.0011 0.12 14.3 4.3 1 23 294 317 294 317 0.98 5 16 6.3e-05 0.0066 18.3 2.4 1 23 380 402 380 402 0.96 6 16 0.00025 0.026 16.4 2.6 1 23 408 431 408 431 0.96 7 16 1.4e-06 0.00015 23.5 2.8 1 23 625 647 625 647 0.97 8 16 4.7 4.9e+02 2.9 1.6 2 23 666 688 666 688 0.87 9 16 0.013 1.4 11.0 1.4 1 23 694 717 694 717 0.97 10 16 3 3.2e+02 3.5 3.1 2 23 899 921 898 921 0.94 11 16 0.18 18 7.4 3.4 2 23 928 949 927 949 0.97 12 16 5.1e-05 0.0053 18.6 1.3 1 23 956 978 956 978 0.98 13 16 0.00014 0.015 17.1 3.7 1 23 985 1007 985 1007 0.97 14 16 0.17 18 7.5 0.1 2 23 1083 1105 1082 1105 0.94 15 16 0.00029 0.031 16.2 2.8 1 23 1111 1134 1111 1134 0.98 16 16 5.2e-06 0.00055 21.7 1.2 1 23 1141 1163 1141 1163 0.96
Sequence Information
- Coding Sequence
- atggatgAATTACAAAAGACCATCTCCAAAAGGCATTCAAAAGATGTCGGTAATGATAActtatgtaaaacaacaacttcCAATGAAAAGAACAAAGAAACTTCTGTGGAGAACTGTCAAGAAATCCAATCTAAAAAGGAATCGAATGAAGTGATAAATAAAAGTATAATCTCCAATGAAATAGATAAAGATACTTTAagtaattgttatataaaagaaGAAATTGACCTAAATATTGAATCTAAAGACGCTTTAGAAGTTTCAGATGtctataaaatatatcaaactGAATTAAATGATGATGCAGAAAAAAGAGAAGATAACGTCTTGATAGACGATGATGACTTTGCATTAGAAAAAGAAACTTCATTAGattggacaaatttaaataaatgtaaaatttgtggCAAGTCCTTTGTTTCCCAAGCACACTTAAGACGTCACTTTAGTAAACATTCAGTAGAACGTCCATACCAGTGCTCATTCTGTGACAGACGCTACAAGCGTAAGGATGATATGAAAACTCATCAAAGAAGATTTCACTTTAAACTTTTGATTTCCTTAGCTGAGAAAACTATAGAAGCAGGAAACACAGAGCATTTAAGAGCTAAGAATGATAAACAAGTTTTAATACCTCAAACGGAACGTATCTTAacaaaccatttaaaagaaCGTCCCTTTAAGTGTTCTCTTTGTTACAGACGTTACAATCGAAAGGTTGATTTGGaaactcataaaaaaaatgttcacctCGAACTTTTACCGCCCTTACCTGAGAAACCTATTGATAAAGAAGATaatttaaagggtttaaaagatAAAGAAGTTGCCAGCTCGCACTGGAGATCTCACTTAAGTATGCATTCAAAAGAACGTCCCTTTAAGTGTTCTTTCTGCTACAGACGTTATTCGCGTAAGGATTATATGAGagctcatcaaaaaaaaattcaccctGATCGCTTCaagaaaactataaataaagaaaagtatttaaaggttttaaacgataaaaaaatcgaaaaagtttACGATAAAGTTATTGTTGCAACGCCAAATCAAAATAAGGAAACCATCAAGATAGACAATGAAGCATTAAGACCAAACATCTGTAAAGTTTTAAAGGATATGCCAACGGAACACGTCTGtaaaatttgtaacatttcttgCAGTTCTGCATCTAATTTGAATCGTCATTATCTTGCACACAGCAATGTACGCCCTTTCGATTGTTCTTATTGTACGAAATCCTTTAAACGCAAAGATGATAAGAAAGCGCATGAAAAGAGAATACATAACAAACAATTCATTGCTgaccaaaataaaaaagctaaGGCTTTTGTAGCTGCTCTCATTGAAGATAATTCCAATACATCTACTGAATTTGAAGATGATTCTCATAGATTTGCTCGACTTAAAAATAATCCCAACACTCTTGGGGATAGCAATACAGCGTCCAAAAGACCCAAAAGCAGTCTAAACTATGAAGATTCCATACATTCACATAATCTTGGAGAAAATACATCAAATATTGCAGAAGAACCTTTTCCCGTTAATGTTTTAGAAATATCTAAATCCGAATATGTATTTAATGAAGCAATGAGTTTTCAAATAAGCCATGATATCAAGAATGTTGAAGATCCCATAAATCCTGGAAATGAAGTTCCTACTGATTCTCTAAATCCTTTAGagaattttccaaataaaactaTAGATTTGAATAAATGTGAAGAAGAAGACGTGGAGTTATATCAAGCcaatgaaaaatgtttgtctAATGAAGATCATTTCGATAAGGCCATTATAAATGATAATGAACGTTTAACAGAATCTTTAACAAATCTTCCATCAACTTCACAAAATTTGGTAAAGAAATACGCTTGTGAAAAATGCCCCAAATCGTTTTATTCTAAAACGAATTTAAAACGTCACTACCGTAATCATGGTAGGAAAAAATCCCGTAAACCCCTTGTTAAAGGTCTTTTAGCTATTGATCCAAAATGTGCAGTTTGTaaaaaggaatttatttGCCGCCAAGATTTCATTAAACATGCCGAACTTTATCATCTAAAAGATAAGGCTTTTAAATGTAATCTTTGTCCTATGCGCTTTTCAAATGTAAGCTCTATACCACGCCACAGAAGGAAATTTCATGAAGAATCGACTACGGAAAagttttgtctaaatttttctaaacaatATAATCGCACAGACAATTTCCAAAAGCATTTACAGAAAAATCGCAGGAGTACTTATAATTCTACAGCACAAGATTTAAGTTTCAATGAAGATACTGATGAAGAAACCATGAGTTCTAGTAGTCAGGATAATAATAGCATAAATGAGTCATTAAATTCTTCTGTTGAATATGAACAAACAAATAGACGTTTTAATGAAAGTGAACTGGAAAGTGTGAATAATAGTGaagaagaagatgatgaagaagcTGAAGAagtagaaaatatgaaaaattcatttaaaattaaagaaacacaCCATACAGATAATGATTCACAAGACGATTCAGATATCGAAGAAGATGAAACAAGTACAAATTATTCGCAAAAAAATGCATATCTTTCGGATAAATCTACAAATTATTCCCATCAAAATGCAGCTGTCGATGAAGAATCTATAAGCGAAACTTCATCAAACACGAAATGTCGTAAAAATAAGAAGCCTCCAATGCTAGACAATAAATGCGTAATTTGTTTCCAGatATTTGATTTTCATCGTGATCTTATTCAACATGCTCAACAATGTCATCCCAgtgaaaaagctttaaaatgtcGGATTTGTGCTGTTACTTTTTCTCACCATGGTTCGGTATATCGTCATTTtagaattcataaaaaattgaccaaaaaatatgtttgcgaATTTTGCTTCAAGGCTTTTCCATTTAAAGATTACTTAAAAACTCACCTAAGAATACATTATACCGTAAAAGGCGCACATCCTTGTAATTTATGTGATAGATCCTATAAGCATTTAGATTCATTGGTATCACATCAAAAGACTCATTCGCAACAAGAAACAAATGAATGCAATAAAGagataaatatatcaaaaaaagttaaagatgAAGAGTCTACAACAACTACGAGTAGTAATGTTGAATCTGATCAAGCAAAAGaagcaaaatatttagaaaataattctgcTGCAAATGAGACTAAAGAAGATgagatttttaagaatatatcagagactttaattaaattaaaatcaaggcACAAACTTGAAGGGAAGTGTCCTATTTGCAAAATGGTTATAAAAAGCTATCAAGATTTTGTCCAGCATCTTGAAAATGTCCATCCTGAATTTGAAGtctttaaatgtaaaatgtgTGATAACCGTTTTTCGAATACAAACTCTTTATCATCTCATATGAATAGCTATCACATACAAACTACAAAGAAACATATTTgtgaaatttgttcaaaatcattttatcGTGCTAGTGAGTTAAAAAgtcatttaaatatacatacagatGTAGGCGAAAAATCCTTTAAAGATAATAATCAAGATGTAAATAATTATCaaatgataaatttacaaactaaTTCCAAAGATCTGGATGAAGATGTCGAACATTTACAGCAACATTATGAAAAACCTCAATTAATGCAGACAACTGatattaaagaagaaaatatgaacttaaatattaaacaagagGGTCTAGTTGATGATTCCTAA
- Protein Sequence
- MDELQKTISKRHSKDVGNDNLCKTTTSNEKNKETSVENCQEIQSKKESNEVINKSIISNEIDKDTLSNCYIKEEIDLNIESKDALEVSDVYKIYQTELNDDAEKREDNVLIDDDDFALEKETSLDWTNLNKCKICGKSFVSQAHLRRHFSKHSVERPYQCSFCDRRYKRKDDMKTHQRRFHFKLLISLAEKTIEAGNTEHLRAKNDKQVLIPQTERILTNHLKERPFKCSLCYRRYNRKVDLETHKKNVHLELLPPLPEKPIDKEDNLKGLKDKEVASSHWRSHLSMHSKERPFKCSFCYRRYSRKDYMRAHQKKIHPDRFKKTINKEKYLKVLNDKKIEKVYDKVIVATPNQNKETIKIDNEALRPNICKVLKDMPTEHVCKICNISCSSASNLNRHYLAHSNVRPFDCSYCTKSFKRKDDKKAHEKRIHNKQFIADQNKKAKAFVAALIEDNSNTSTEFEDDSHRFARLKNNPNTLGDSNTASKRPKSSLNYEDSIHSHNLGENTSNIAEEPFPVNVLEISKSEYVFNEAMSFQISHDIKNVEDPINPGNEVPTDSLNPLENFPNKTIDLNKCEEEDVELYQANEKCLSNEDHFDKAIINDNERLTESLTNLPSTSQNLVKKYACEKCPKSFYSKTNLKRHYRNHGRKKSRKPLVKGLLAIDPKCAVCKKEFICRQDFIKHAELYHLKDKAFKCNLCPMRFSNVSSIPRHRRKFHEESTTEKFCLNFSKQYNRTDNFQKHLQKNRRSTYNSTAQDLSFNEDTDEETMSSSSQDNNSINESLNSSVEYEQTNRRFNESELESVNNSEEEDDEEAEEVENMKNSFKIKETHHTDNDSQDDSDIEEDETSTNYSQKNAYLSDKSTNYSHQNAAVDEESISETSSNTKCRKNKKPPMLDNKCVICFQIFDFHRDLIQHAQQCHPSEKALKCRICAVTFSHHGSVYRHFRIHKKLTKKYVCEFCFKAFPFKDYLKTHLRIHYTVKGAHPCNLCDRSYKHLDSLVSHQKTHSQQETNECNKEINISKKVKDEESTTTTSSNVESDQAKEAKYLENNSAANETKEDEIFKNISETLIKLKSRHKLEGKCPICKMVIKSYQDFVQHLENVHPEFEVFKCKMCDNRFSNTNSLSSHMNSYHIQTTKKHICEICSKSFYRASELKSHLNIHTDVGEKSFKDNNQDVNNYQMINLQTNSKDLDEDVEHLQQHYEKPQLMQTTDIKEENMNLNIKQEGLVDDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -