Ehis026465.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- ZNF341
- Assembly
- GCA_949748255.1
- Location
- OX456525.1:55041336-55049093[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 5.8 6.1e+02 2.6 0.1 10 23 10 24 8 24 0.86 2 15 0.084 8.8 8.4 8.9 1 23 30 52 30 52 0.97 3 15 1.1 1.1e+02 5.0 1.0 2 23 61 82 60 82 0.95 4 15 8.7e-05 0.0091 17.8 0.3 2 23 88 110 87 110 0.92 5 15 1.4e-05 0.0015 20.3 0.4 2 23 117 138 116 138 0.96 6 15 1.9e-05 0.002 19.9 2.3 1 23 144 167 144 167 0.97 7 15 0.092 9.7 8.3 3.3 2 23 203 224 202 224 0.96 8 15 9e-05 0.0094 17.8 3.7 2 23 230 252 229 252 0.92 9 15 1.1e-06 0.00011 23.9 0.9 2 23 259 280 258 280 0.97 10 15 8.2e-05 0.0086 17.9 1.0 1 23 286 309 286 309 0.97 11 15 2e-05 0.0021 19.8 1.1 1 23 353 375 353 375 0.95 12 15 0.77 80 5.4 1.3 2 23 384 405 383 405 0.96 13 15 4.6e-06 0.00048 21.8 2.4 1 23 410 433 410 433 0.91 14 15 1.2e-05 0.0013 20.5 0.2 2 23 440 461 439 461 0.96 15 15 8.4e-06 0.00088 21.0 2.4 1 23 467 490 467 490 0.98
Sequence Information
- Coding Sequence
- ATGCAAACTATAAACTCTTTGCTAAAaTATGCATCGGAATACCTCTTACAACGTCATATCGATTCCATTCACAAGGATATACCTTTTCATGTTTGTGatatttgtggtaaaaaatataaatgtaaagaaTCATTCAAACGGCATTATAATCATCATCTAGGTGTTGTTGACAAGGCCGTACAATGTTCCTTATGCAAGACATggctaaaaaatcaaaacagctTACGATTACATCGTTTTATTCACGAGAAACGTCCAACACCGTGCGGTACTTGTGGAAaagttttcaataccaaacgATCCCTCGATAGACATACTGCATATTGGCATAAAATGGATATGAGTTTGCAATGTAATTTTTGCGATAAAGTATTTCGAGAAAAACGTAATTTAGATGAACACATGGCCATACATACGGGCACACAATTGTATAATTGTCCACATTGTGGCAAAGAATCACGTTCGAAatcaaatatgtatgtacatattaaaAGGCAACATCCCGATGAGTGGTTGAAATCAAAAATGGAACGTTTTAATCTAACGCCGAAAGATATTCGTGATAAACATCTTGCCCAGCATCAAGGTATTGTTGAAGCCGCCTTACAATGTTCCCTTTGCAATAAATGGCTTAAAAATAAGCACAGTTTAAAATCGCACCGTTATGTTCACGAGAAAAATCCAACACCATGCGATATTTGTGGCAAAGTTTTTGACACCAAACATTGTTTACGTAAGCATAAATCATATTGGCATAAATTGGACTtgaatttaaaatgttcattttGTGAAAAAGTCTTTCGACAACAACGTAATCTTGAGGAACATATGGCAACGCATACGGGCATTAGTTTGTATACATGTCCACACTGTGGAAAGGAATCACGTTCCAGTGCAAGTATGTATGCACACATTAAGCAGCAACATCCCGTTGAATGGTGGAAAACAAAAATGGAACGTTTAAATATCGATCCCAATACAGCAGAAAATCCTGAatttacCTGTCAAATCACATTAAATCATCATATCCAAATAACACACTTGAATGATGTGTATCATGTTTGTGACGTTTGtggtagaaaatttaaaaataaagctgcTTTTATAAAACATCTTGACCAGCATCAAGGTATTGTTGAACAATCCGTACAATGCTCCATATGTAATACATGGCTTAAAGATAAGTGCAGTTTAAGTTTGCATCGTCTTGTGCACGAGAAAAATTCATTTTCATGTCATGTTTGCGGCAAAGAATTTACCTCTAAACCAAATTTACGTAGACATAATTCATATTGGCACAAAGCGGATTTAAATTTACCATGTACACTTTGTGAAAAAGTCTTTCGACAACAGCGTAATCTCGACGAACATATGGCCATGCATGCGGGCATCAGCCTTTATACATGTCCGCATTGTGGCAAAGAATCACGTTCCAAatcaaatatgtatgtacacaTTAAACGGCAACATCCCGATGAATGGTGGAACTCAAAAATGGAACGTTTAAATTTAGATTATACTGCAGATAATCCACAAATGTTGCCACCACATTTATTCTCTTAG
- Protein Sequence
- MQTINSLLKYASEYLLQRHIDSIHKDIPFHVCDICGKKYKCKESFKRHYNHHLGVVDKAVQCSLCKTWLKNQNSLRLHRFIHEKRPTPCGTCGKVFNTKRSLDRHTAYWHKMDMSLQCNFCDKVFREKRNLDEHMAIHTGTQLYNCPHCGKESRSKSNMYVHIKRQHPDEWLKSKMERFNLTPKDIRDKHLAQHQGIVEAALQCSLCNKWLKNKHSLKSHRYVHEKNPTPCDICGKVFDTKHCLRKHKSYWHKLDLNLKCSFCEKVFRQQRNLEEHMATHTGISLYTCPHCGKESRSSASMYAHIKQQHPVEWWKTKMERLNIDPNTAENPEFTCQITLNHHIQITHLNDVYHVCDVCGRKFKNKAAFIKHLDQHQGIVEQSVQCSICNTWLKDKCSLSLHRLVHEKNSFSCHVCGKEFTSKPNLRRHNSYWHKADLNLPCTLCEKVFRQQRNLDEHMAMHAGISLYTCPHCGKESRSKSNMYVHIKRQHPDEWWNSKMERLNLDYTADNPQMLPPHLFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -