Ehis023340.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- ZFY
- Assembly
- GCA_949748255.1
- Location
- OX456524.1:134395384-134396940[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00033 0.035 16.0 1.9 1 23 8 30 8 30 0.98 2 14 0.00011 0.011 17.5 4.1 1 23 36 58 36 58 0.98 3 14 0.00056 0.059 15.3 5.4 1 23 66 88 66 88 0.97 4 14 0.0065 0.68 11.9 2.0 2 23 94 115 94 115 0.96 5 14 1.3e-05 0.0014 20.4 4.9 1 23 128 150 128 150 0.98 6 14 0.00012 0.012 17.4 0.1 1 23 158 180 158 180 0.97 7 14 5.7e-05 0.0059 18.4 1.6 1 23 207 229 207 229 0.98 8 14 4.2 4.4e+02 3.1 3.0 1 23 237 260 237 260 0.93 9 14 3.2e-06 0.00033 22.3 0.4 2 23 284 305 283 305 0.97 10 14 0.019 2 10.5 10.6 1 23 311 334 311 334 0.97 11 14 8.7e-08 9.2e-06 27.3 2.2 1 23 342 364 342 364 0.98 12 14 8.9e-06 0.00094 20.9 1.2 1 23 370 392 370 392 0.99 13 14 0.00072 0.076 14.9 2.2 2 23 401 422 400 422 0.97 14 14 1.5e-06 0.00016 23.3 0.5 1 23 428 451 428 451 0.97
Sequence Information
- Coding Sequence
- ATGGGTGAAGCTGCAAAAAATTTTAGCTGTACTCGCTGCGATATGAAATTTTTGCgtaatattcaattaaaaaatcacatgCGTATTCATACTGGTGAAAAACCATATAAATGTGATATATGTCATAGAACTTTTCGCATTATAAGCAATCTTAAGTATCACAAAAGGCTGCATGAAGGAAAAGCTGCAAATGTCTTTAATTGTGAATATTGTCAAATGAAATTTCATCGAAATTCTGATTTAACCAATCACCTTCATATTCACTTGGCGGAAAAAAATGAATGTGGTGTGTGTCATGAACGTTTTGAAACTGTAAGAAGTCTTAGAAATCACAAAAAATTGCACCAGGCTGATGAAATTGCTTTAATTGCCGAAAAACCTTTTAAATGTGATATCTGCGACAAACGTTTTCGCAGTAATTCTGGTTTTCAACATCACAAAAAGTTGCATATGGGAGATGCGGCAAAACTTTATAATTGTGGTTATTGTGACATGGAATTTATACGTAAAATCGATTTGGCTAATCATATCAGTAATCACCCTAGCGGAGTAGAATGTAAATTGCAACAAAGTTTTGATACAAATGTTCAAATACGTATTAACACTGGCGAACAACCTTATGAATGTGATATATGCGATAGGCGTTTTCGCATTAAAGACAGTCTACGTTATCACAAAAAGTTGCACATGGAAAAAAGTGTCAAgatttataattgtaaattcTGTCAGATggaatttgtatgtattaatgACTTAATTAATCACCTACAACACATTCATTCTGGCGAAACTCAATACGATGAATATCTTAAAGATCTTAAAAGTACCCATATGGGTGAAGCTACAAAAACTTGCGAAGATTGTGACTGGACATTTTCACGTTATTCTTATTTAGTAAGCCACTTGCGTGGTCATACTGACGAAAGATCTTACAAATGTACCGAATGTCATAAATGTTTTCGCAACATTGAATGCCTtaaatatcataataaaaagagcCACATGGCAGAGAAGGCAATAGTTTATAATTGTGAATTTTGTGATAAGAAATTTAAACGTAATTCTGATTTAAAAAACCACATACGTATTCATACTGGCGAAAAACCTTACGAATGTGATATATGTAACAAACGTTTTCGGgccaatcaaaatttaattatgcaCAAGAAGACGCATATGGGTGAAGCATCTAGAActttaaaatgtgatttttgtgATAAGAAATTTATGCGTAATCTGGATCGTAAAATTCATATGAGATCTCATACTGGTGAAAGACCATATAAATGTGATATATGTCCTCGTGATTACACATCAAAAGTCAATTTAAAAAAGCACATTGAAAGGGATCACGTATCGCGTGCCCTCAGTAAGCGTGAAcgtaaacaattattaaaagaagaattaaagcaacaaaagaaattaGTAGAAGAACTTAAATTGAAGTTAATGCAACCAGAGTTGTTAAAAGAAGAATTAGAATTggaaatacaaaagaaattaatagaAGAGTTGAAAGAGAAAGTAAAGGAGAATAATAAATGTGAAGAAAAATAA
- Protein Sequence
- MGEAAKNFSCTRCDMKFLRNIQLKNHMRIHTGEKPYKCDICHRTFRIISNLKYHKRLHEGKAANVFNCEYCQMKFHRNSDLTNHLHIHLAEKNECGVCHERFETVRSLRNHKKLHQADEIALIAEKPFKCDICDKRFRSNSGFQHHKKLHMGDAAKLYNCGYCDMEFIRKIDLANHISNHPSGVECKLQQSFDTNVQIRINTGEQPYECDICDRRFRIKDSLRYHKKLHMEKSVKIYNCKFCQMEFVCINDLINHLQHIHSGETQYDEYLKDLKSTHMGEATKTCEDCDWTFSRYSYLVSHLRGHTDERSYKCTECHKCFRNIECLKYHNKKSHMAEKAIVYNCEFCDKKFKRNSDLKNHIRIHTGEKPYECDICNKRFRANQNLIMHKKTHMGEASRTLKCDFCDKKFMRNLDRKIHMRSHTGERPYKCDICPRDYTSKVNLKKHIERDHVSRALSKRERKQLLKEELKQQKKLVEELKLKLMQPELLKEELELEIQKKLIEELKEKVKENNKCEEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -