Ehis031940.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- -
- Assembly
- GCA_949748255.1
- Location
- OX456525.1:155723412-155727156[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00078 0.082 14.8 0.5 1 23 127 150 127 150 0.97 2 13 0.00077 0.081 14.8 1.8 2 23 156 178 155 178 0.97 3 13 1.3e-05 0.0014 20.4 5.2 1 23 187 210 187 210 0.97 4 13 3.3e-05 0.0035 19.1 6.5 3 23 457 477 456 477 0.98 5 13 1.6e-05 0.0017 20.1 3.1 1 23 483 506 483 506 0.96 6 13 8.6e-05 0.0091 17.8 1.5 1 23 511 534 511 534 0.98 7 13 7.1e-05 0.0075 18.1 1.2 1 23 545 567 545 567 0.95 8 13 0.00034 0.035 16.0 3.0 1 23 572 595 572 595 0.97 9 13 3.9e-05 0.0041 18.9 0.8 1 23 601 623 601 623 0.96 10 13 0.00017 0.018 16.9 1.9 1 23 629 651 629 651 0.98 11 13 1.2e-06 0.00012 23.7 1.6 3 23 659 679 658 679 0.99 12 13 6.2e-07 6.6e-05 24.6 0.3 1 23 685 707 685 707 0.99 13 13 0.002 0.21 13.6 0.1 1 23 712 735 712 735 0.98
Sequence Information
- Coding Sequence
- atggaagtAAATGCAAGTTTACCAAATTACAATAATACTACAATTTGCCGTATTTGTATGCAAGaggatataaatttatttcctaTATTTAATGATGTATACATGGGCGACGGCTCTGTTACTGTGGCCGATATTATTACAGAGTGTACAAAATTTCCGGTGGATTTTAATGATCAACTACCAACACAAATATGCAATATATGCATGGAAGCAGCTCGTAATGcccatcaatttaaaaaacttactgAGGAATCCTACTGCCGTCTTAAGGCTTTATATGACATAACATGGGTTCCCAAACAGGAGAAGGGTAGTAGTGTTGTGAGGGTGGGTGCCCTCACAACAGATAGGTATACACAAACTGAAAAAAGCACTGTGTTTCAGTGTGAGTCTTGCCCGaaaaagttttttgcccaaaacGAATTAATAAAGCATCGTGAAACCGCACACATAACAGATGGTAAAAAATGTCGTGTATGTGGTGAAAAATTCTTTCATTTGGGTCAGTTGAAGGTTCATTTGTCTACAGAACATCCTGGTGAAGGTATACGTTGTGATTTTAAATGTCACATTTGTTTAAGAGAATTTACCCGAAAGGATCATTTAAAAAGACATTTGATAAGGGtacataaaatggaagaagtcaaattgaaaatttCCAAAGTATCTCTCGATGAACCGGAAATTGAAAACCCACCAATAATTTCCACTAGTCTAAATAACTACAGCAGTCATTGGCCTGATTATCAAGAAGATAATGACAATGAACCGATAGCAATAGACAACCACGAAAATGATAATATCACAGCAACAAATCCATTCTCCAGTGAAGATGAGGGACTAGATAATCAAAATTTCAATGACATGAATGAACAAGATGTTAAACAATTTGTGGAAACTATAGCACATCCTGAAATATCTATAAAAGTGGAAAATCCAGACTAcagttataatattttaacggaaaagaaagaaaaactacaaaaatcaattgataGCACACTATATAAAGAAACAAAGGCCGAAGTTTCTCCATTGAAACCGGAGAAATCGGAAGACTATGATGTTAACAAAGACGCTAAAAATAACGaagatgataataaaaatacatttcacaCAGCTGATGATGATCAACACAGTATTAACCAAAcaagtgatgatgatgatactgACGGCTATGATCATGATGCTGATGATGACAGTTACGAACATGCTAAAAAAACTAGCCCCGAAAAGGCTATATCAGCAGCAACGATAAAACAAGAAAATCCCACATGTTCCATCTTTACAAAAGCAACACtagcaaataatataaaaacaacaccACAAAAAAGAAGACGTGGTTCGTTCAAGGATGAAGATAATCATTGTAAAATATGCAATCGTTCATTTACACGTTACAATCATCTACTGCGCCATATGTTAACACATAGTGATGAAAAGCCACatgtttgcaatttttgtaataaaggtTTTGCAAGGTCGGACCATTTGCAAAAACACGTACAAAGTATACATTGTGAAAAGAGTTTTAAATGTGATCAGTGTCCCAGTGCTTATGGTCGCAAAGATCATCTGCAACGTCACATAGAAACACGACACAATAAAGATTCTTCGGTACAAAAGCCACAATTTGATTGTGACATGTGCGAGAAAAAGTTTACAACAAAAGCTTATCTAGCTAAACATAAACTATTGCATACAGATCGTTTGTATGCCTGTAAACATTGTTCGGAAACGTTCACAGAAAAGGAACAAATGAAAGAACATCAAAAGAGAGAACACACCCAACCCCGCAACTTTCTATGTAATATTTGTGGTGATTCGTTTCAACGCAATGAATACCTTAAGATTCATATGCGTCGTCATACCGGAGAAAAACCATACAAATGCCGTTTCTGTGAAAAAGGTTTTCCACGTAGCACAGATTTAAAAATGCACGAACGatatcATATTGGTCATAAACCTAATCTGTGTACACTTTGCGGCAAAGGTTTTCATCGTCCCTATAATCTTACCATTCATATGCGTACTCATACGGGTGAGAAGCCCTACAAATGTAATCAATGTCCTCAAGCATTTGCTCAAAGTAATGACTTGAAGGCTCATATTAGACGTCATACAGGTGAACGTTTCCGTTGTGATGTGTGTAGTGCAGCATTTTTACAGCGTTATGGTTTAAATGCTCATTTAAGAACGGCGCATGGTATAATAGTTACCTCATTTACCGGTCGTTTGCGAAAAACTGATCAACCTATTGACCCGGCCGAACTTCTAGGACAACAACCGCCAGCACCACCAACTCAACTACCAAGCGTTGCCGCGCCAGAGCAGTCTCACACATCGTTATCTTCGCCACATAAAAATAGTAACTCTACACCTTCACCATTATATTTAGGACATCATTTTATAAATCCAATGCCAGTTATTGCAGTACCAACACCAACATCTCCCCTTGAGATATCTCCAATAGCAACACATCCGCTCACACATACTGCATCACAACAAATGCAAATGTAG
- Protein Sequence
- MEVNASLPNYNNTTICRICMQEDINLFPIFNDVYMGDGSVTVADIITECTKFPVDFNDQLPTQICNICMEAARNAHQFKKLTEESYCRLKALYDITWVPKQEKGSSVVRVGALTTDRYTQTEKSTVFQCESCPKKFFAQNELIKHRETAHITDGKKCRVCGEKFFHLGQLKVHLSTEHPGEGIRCDFKCHICLREFTRKDHLKRHLIRVHKMEEVKLKISKVSLDEPEIENPPIISTSLNNYSSHWPDYQEDNDNEPIAIDNHENDNITATNPFSSEDEGLDNQNFNDMNEQDVKQFVETIAHPEISIKVENPDYSYNILTEKKEKLQKSIDSTLYKETKAEVSPLKPEKSEDYDVNKDAKNNEDDNKNTFHTADDDQHSINQTSDDDDTDGYDHDADDDSYEHAKKTSPEKAISAATIKQENPTCSIFTKATLANNIKTTPQKRRRGSFKDEDNHCKICNRSFTRYNHLLRHMLTHSDEKPHVCNFCNKGFARSDHLQKHVQSIHCEKSFKCDQCPSAYGRKDHLQRHIETRHNKDSSVQKPQFDCDMCEKKFTTKAYLAKHKLLHTDRLYACKHCSETFTEKEQMKEHQKREHTQPRNFLCNICGDSFQRNEYLKIHMRRHTGEKPYKCRFCEKGFPRSTDLKMHERYHIGHKPNLCTLCGKGFHRPYNLTIHMRTHTGEKPYKCNQCPQAFAQSNDLKAHIRRHTGERFRCDVCSAAFLQRYGLNAHLRTAHGIIVTSFTGRLRKTDQPIDPAELLGQQPPAPPTQLPSVAAPEQSHTSLSSPHKNSNSTPSPLYLGHHFINPMPVIAVPTPTSPLEISPIATHPLTHTASQQMQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -