Ehis031910.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eustalomyia histrio
Gene Symbol
-
Assembly
GCA_949748255.1
Location
OX456525.1:155472668-155480153[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0019 0.2 13.6 2.5 1 23 237 260 237 260 0.96
2 16 0.0013 0.14 14.1 2.0 1 20 277 296 277 299 0.93
3 16 1.6e-05 0.0016 20.2 0.5 2 23 303 324 302 324 0.96
4 16 0.0017 0.18 13.7 4.9 1 20 330 349 330 352 0.95
5 16 4.8e-06 0.0005 21.8 0.7 2 23 359 380 358 380 0.97
6 16 0.001 0.11 14.4 3.2 2 23 387 408 387 408 0.97
7 16 6.6e-05 0.0069 18.2 0.8 1 23 414 436 414 436 0.98
8 16 1.3e-07 1.4e-05 26.7 0.5 1 23 442 464 442 464 0.98
9 16 0.0028 0.29 13.1 4.0 1 23 529 552 529 552 0.93
10 16 0.0078 0.82 11.7 1.6 1 19 569 587 569 591 0.92
11 16 1.8e-05 0.0019 20.0 0.1 2 23 595 616 594 616 0.96
12 16 0.00041 0.044 15.7 7.1 1 21 622 642 622 644 0.95
13 16 1.8e-05 0.0019 20.0 0.4 1 23 650 672 650 672 0.99
14 16 0.0013 0.14 14.1 2.3 2 23 679 700 679 700 0.97
15 16 0.001 0.11 14.5 1.6 1 23 706 728 706 728 0.98
16 16 5.7e-07 5.9e-05 24.7 0.6 1 23 734 756 734 756 0.98

Sequence Information

Coding Sequence
atgttaaaattgatacaACCAAATAGCAATgcatttcacaattttaaatgtGGTGAAATCTTTTGCATCTCTCCTGCTGTCTACAACGTCACTTGCTGTCTGTGTGCCAGCAAAATGCATTTGGAACAATTTCCCAGTCACTTTCAAATGCAGCATCTCACCTTGGCCGAAGAATCAATTAATTTGGATGATTTAGAACGTAAGCGTAAAGCTAAACTGGCAAAAGATGCTACGCTCTTGGATAATATGGCCATTAAAGAAGAAGATCCCGAAGATGATCCTATAAAACAAGAAGAAGTTGGAgacgatgatgaagatgataaAAGTCTACAACAATTGCTAATGGAAAGATCAAAAGCTAGAAAAGAGCTAAAGGAAGAAGAAGATGCTAATAAATGTGCTGATATTGATATTGAAAGTAAATTGGAAGTAGAAATGATTGTTAAAAAGCCCAATACTAGAAATACCCGACGGGTTCAATATAATGAAGATATATTGGAAGATAAGGaggaagttaaaaaaatattagaacctAATAAGGAAACTAAAGTAGTCGATATTGATTTAAGTAAAaaagatgataatgatgatgatgatgacaggGAAGATAACGATGATGTAGATATGGATAAAGATTGGGCTGAAGATGGTAAAATTTCGGATTCGGATtccGAAGCTGAAAAAAATATCCCAATAGAGGAGCTCCCTTTTGCTTGTCTTATTTGTGAGCGAACATATCAGTCCAAACATAGTTTACAAAAACATAATCGTAGTGTCCATAATCCTAATAAATCACCGAAAAGAAAACGTAATAGACAAAAATCTGAACACAAATGTGATCAATGTGATAAAGTATTTCGCTCAGAACGTGATCTTCGTGGCCATAAATGGAAACATACTGGTATAGTTTGCGATATTTGTGGTAAACGTTTTACACAGACTGGTAACATGATGCGCCATAAAATACGACACACTGGCATTAAGGCCCACAAATGCAAAGATTGCGGCAAAGAGTTCTTTACCGACAAAGAATTAAAATCACATATGATATGTCATACTGGCCTGATGCCAATTGTATGTGAGATTTGTGGTAAAAGATGTCGCGATAAAGGCGTTTTAACTGCTCACATGCGAAGACATACTGGAGAAAGACCCGCAAAATGCGATGTCTGTGGTAAATGTTTCTTTTCGTTCCACGATTTAAATGTCCACGCTGTAACGCACAGCAGTGAACGGCCGTTTAAATGTGATATTTGTGGGTCAACATTCCAGCGAAAGAAAGCATTACGAGTTCACAAATTAATACATTCAAAAGATCGTAAACATGTTTGCAAAATATGTGGTAAAGGTTTTGCCCAATCAGGTGGTTTAAATTCCCACATGCGTACCCACGATGCAGCGTTGGAGAAACAATTAAGTAATGAATCTGCtcatcagcatcatcatcataatGTTGCCATGCCACCAACCATAATGTTAGATCATACTAATTCTCAAACTACAGCAACTACCACAGAAATCAATGTGATGGGGCAATACATGtcCGATGCTGCTATTAAAAATGACCCAACTGATGAACTTCCATTTCCTTGTCTTATCTGCCAGCGTACATATCGTACCAAACaaagtttacaaaaacataACCACAGCAAACATAATCCAAATAAAAAACCGACAAAAAAGCGCATTAGAccaaaaaaggatcataaatgTGAAGAGTGCGGTGAAGTATTTCGTACAATACTCCATCTTCGTGGCCATAAATGGAAACATACTGGTATAGTTTGCGATATATGTGGTCAAACTTTTAAACAGGCCGGTACTTTGGTGCGCCATAAAATACGTCATACCGGCATTAGGGACCACAAATGCAAAGAATGTGATAAAGcgtttttcaccaaaaaagaattaaaatcacATATGAAATGTCACACTGGCTTTATGCCGTATGTCTGCGAAATTTGTGGTAAAAGATGTCGTGATGGTGGCGTCTTAACTGCTCACATGCGCCGTCATACTGGAGAGAGACCGGCAAAATGTGATGTTTgtggtaaatgtttttttacggGTCACGATTTAAATGTCCACGCTGTAACACATAGCAGTGAACGGCCATTCAAATGCGATATCTGTGGTTCAACATTTCAATTGAAGAAGTCATTGCGAGTCCATAAGTTAAGACATACAAATGATCGTAAAcatgtttgtaaaatatgtgGTAAAGGTTTTGCTCAAACGGGTGGTTTAAATTCCCACATGCGTACCCACGATGCTGCATTAgataaagaattaaataatgaatttgCTCCACAGCATGTTGTCATAGATCACTTTAATACACCTAACGACAATCAGTCGGGGGGCACAACAGCAACTATCATCGAAATACAGCAACTACCACAGGAGTTGCTGcagtaa
Protein Sequence
MLKLIQPNSNAFHNFKCGEIFCISPAVYNVTCCLCASKMHLEQFPSHFQMQHLTLAEESINLDDLERKRKAKLAKDATLLDNMAIKEEDPEDDPIKQEEVGDDDEDDKSLQQLLMERSKARKELKEEEDANKCADIDIESKLEVEMIVKKPNTRNTRRVQYNEDILEDKEEVKKILEPNKETKVVDIDLSKKDDNDDDDDREDNDDVDMDKDWAEDGKISDSDSEAEKNIPIEELPFACLICERTYQSKHSLQKHNRSVHNPNKSPKRKRNRQKSEHKCDQCDKVFRSERDLRGHKWKHTGIVCDICGKRFTQTGNMMRHKIRHTGIKAHKCKDCGKEFFTDKELKSHMICHTGLMPIVCEICGKRCRDKGVLTAHMRRHTGERPAKCDVCGKCFFSFHDLNVHAVTHSSERPFKCDICGSTFQRKKALRVHKLIHSKDRKHVCKICGKGFAQSGGLNSHMRTHDAALEKQLSNESAHQHHHHNVAMPPTIMLDHTNSQTTATTTEINVMGQYMSDAAIKNDPTDELPFPCLICQRTYRTKQSLQKHNHSKHNPNKKPTKKRIRPKKDHKCEECGEVFRTILHLRGHKWKHTGIVCDICGQTFKQAGTLVRHKIRHTGIRDHKCKECDKAFFTKKELKSHMKCHTGFMPYVCEICGKRCRDGGVLTAHMRRHTGERPAKCDVCGKCFFTGHDLNVHAVTHSSERPFKCDICGSTFQLKKSLRVHKLRHTNDRKHVCKICGKGFAQTGGLNSHMRTHDAALDKELNNEFAPQHVVIDHFNTPNDNQSGGTTATIIEIQQLPQELLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-