Basic Information

Insect: Eustalomyia histrio
Gene Symbol: -
Assembly: GCA_949748255.1
Location: OX456525.1:141519770-141529738[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0013 0.14 14.1 1.0 2 23 11 33 10 33 0.95

2 20 0.00059 0.062 15.2 1.0 1 23 48 70 48 70 0.96

3 20 0.0047 0.5 12.4 1.5 1 23 75 98 75 98 0.96

4 20 0.0002 0.02 16.7 0.2 1 23 104 126 104 126 0.98

5 20 0.0014 0.15 14.0 5.1 1 23 132 154 132 154 0.99

6 20 0.00085 0.089 14.7 2.3 1 23 160 182 160 182 0.96

7 20 7.9e-07 8.3e-05 24.3 1.0 1 23 187 209 187 209 0.99

8 20 0.00053 0.055 15.4 1.3 1 23 215 237 215 237 0.96

9 20 5.6e-06 0.00059 21.6 2.4 2 23 284 305 283 305 0.97

10 20 0.00018 0.019 16.8 2.3 1 23 311 334 311 334 0.97

11 20 0.00074 0.078 14.9 0.0 1 23 346 368 346 368 0.97

12 20 0.00043 0.045 15.6 2.7 1 23 373 396 373 396 0.95

13 20 4.4e-05 0.0046 18.8 1.9 1 23 402 424 402 424 0.97

14 20 2.4e-05 0.0026 19.6 0.8 1 23 430 452 430 452 0.99

15 20 0.00012 0.012 17.4 1.2 1 23 458 480 458 480 0.95

16 20 3.7e-06 0.00039 22.1 1.1 2 23 486 507 485 507 0.98

17 20 0.00013 0.014 17.3 1.5 1 23 513 535 513 535 0.94

18 20 1.4e-05 0.0015 20.3 2.0 1 23 541 563 541 563 0.99

19 20 1.5e-06 0.00016 23.3 1.3 1 23 569 591 569 591 0.98

20 20 0.00096 0.1 14.5 0.6 1 23 597 619 597 619 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0013	0.14	14.1	1.0	2	23	11	33	10	33	0.95
2	20	0.00059	0.062	15.2	1.0	1	23	48	70	48	70	0.96
3	20	0.0047	0.5	12.4	1.5	1	23	75	98	75	98	0.96
4	20	0.0002	0.02	16.7	0.2	1	23	104	126	104	126	0.98
5	20	0.0014	0.15	14.0	5.1	1	23	132	154	132	154	0.99
6	20	0.00085	0.089	14.7	2.3	1	23	160	182	160	182	0.96
7	20	7.9e-07	8.3e-05	24.3	1.0	1	23	187	209	187	209	0.99
8	20	0.00053	0.055	15.4	1.3	1	23	215	237	215	237	0.96
9	20	5.6e-06	0.00059	21.6	2.4	2	23	284	305	283	305	0.97
10	20	0.00018	0.019	16.8	2.3	1	23	311	334	311	334	0.97
11	20	0.00074	0.078	14.9	0.0	1	23	346	368	346	368	0.97
12	20	0.00043	0.045	15.6	2.7	1	23	373	396	373	396	0.95
13	20	4.4e-05	0.0046	18.8	1.9	1	23	402	424	402	424	0.97
14	20	2.4e-05	0.0026	19.6	0.8	1	23	430	452	430	452	0.99
15	20	0.00012	0.012	17.4	1.2	1	23	458	480	458	480	0.95
16	20	3.7e-06	0.00039	22.1	1.1	2	23	486	507	485	507	0.98
17	20	0.00013	0.014	17.3	1.5	1	23	513	535	513	535	0.94
18	20	1.4e-05	0.0015	20.3	2.0	1	23	541	563	541	563	0.99
19	20	1.5e-06	0.00016	23.3	1.3	1	23	569	591	569	591	0.98
20	20	0.00096	0.1	14.5	0.6	1	23	597	619	597	619	0.95

Sequence Information

Coding Sequence: ATGTCTGTTCATTCAATGGAAAATAAATCTGTGTGTGAAATATGTCAATATCGTTATCGAAGTGATACAGAATTGAAAAAGCACATTACAAGAAAACATTCCGTTTGTAAACctgcaaaaattacttttgcCGGTGGTCCATATGCCTGCCCCAAATGTCCTAttatatttgaacaaaaaagaTGTTTGACACAGCATAGAGTCATGCACATGGATAGAGATTTTGCATGTAAAGTTTGTggtgtaaattgtaaaataatggCATCGCTTACCAAACACATGAAGAGTAAACATCCTAATGTTTTGCCATACAAATGTGGAACATGCGAAAAAGCTTTTCCAGTCGAGCCACATTTAAATGATCACATCAAAGAGCATTTGGGACAGAAAAAGTATAAATGCGACATGTGTGAAAAAAgCTTTCCTTGCACACACTCCTTACAAAATCACATACGTAGTCATACTGGAGAAACGCCATATTTGTGTTGTCACTGCGGTGCATCATTTAGAGCGCCAAATCTTTTGCGACAGCATTTACTAACACATGGAGAAGAAAAATTCCAATGTCCGGAATGTCCTATGAAATTTCGTTCTAAAAACTATTTAGCAAAACATTTAAGATCACATGCACCAGCAAAACGTCATGTCTGTGATGTATGTGCTGCAAGTTTCTCTAGAAAGGATACTCTGACTGCTCATAAATTTAAACATACTGGACTGAGACCATTCAAATGTGAAGAATGTAGCTTAAGcaatttattagaaattaaagtTAACACATCAGACGATATTAAGCctaaaagaaaatatcataGAAAAAAACCGTTAAATAGAGCCAAAAGTTGCAAAACATGTTCTGAGTGTAATGAAACATTTTCGACAGGCAGTCACTTAACACGTCATATGTCGGTACATTCAATGCAAAATGAATTTGTGTGCAATATATGCCAATATCGTTTTACCAGTGAGAGGCGATTGAAAAGCCACATGTCATCAAAACACATGGGCTTGGAGATAAGCTTAACTGGCGGTCCATATCCATGTCCCGATTGTACTCTGGTTTTTGAACAGACCAGAGCTTTAGCGGCACATAGAGTGATGCATATGAAAAGAGATTTTAAATGCGAAGTATGtggtaaaaattgcaaaacattGGCAGCTGTAACCAGACATATGCATGCGAAACATCCAAGTATCTTACCACACAAATGCCAAATGTGTGATCAAGCTTTTTCAGTCGAATCGCACTTAAACGATCATATCAATGAGCATTTAGgacaaaaaaagtataaatgtgaTATGTGTGAAAAGAGTTTTCCTAACACAACCGTTTTAAAGGAACACTTACGTTCGCATACTGGTGAGTCACCATATTTATGCCCCCACTGTGGTAAATCATTCAAAACGGCCAATATTCTGCGTGGTCATTTACAAAGACATGGTGAGAAAAATGTCCAATGTTCTGAATGTcctatgaaatttaatacaaaagaaaatttatacaaacacATGACCACTCATTCGAAGGAAAAGCCACACGTTTGTGATGAATGTGGTTCAGCTTTTAAAAGACAGGACACATTAAAGGCTCATAAATTCAACCATACAGGGCTGAGACCATTCAAATGTGAAGAATGTAATTTTAgttttgttttaaaacgtcAATTGCAAAAACACCAAATCACTCATACTGGTAAAAAGCCTCATAAGTGTACATATTGTGATCGTGCTTATGCTTCTAGCGGAGATCTGGTTAAACATTTACGTACTCATGTGGGTGAGAAAACCTATTTTTGTGACGAATGCCCGGAAGCTTTTAAGTATTTGAATGATTTAAAAGATCATAAAAgtcaacattataaaaaaaaattggcgttGCAGGGAAATAGTGACCAGAAAGGAATTGATGATATAAAGGATGCTAAGAAATAG
Protein Sequence: MSVHSMENKSVCEICQYRYRSDTELKKHITRKHSVCKPAKITFAGGPYACPKCPIIFEQKRCLTQHRVMHMDRDFACKVCGVNCKIMASLTKHMKSKHPNVLPYKCGTCEKAFPVEPHLNDHIKEHLGQKKYKCDMCEKSFPCTHSLQNHIRSHTGETPYLCCHCGASFRAPNLLRQHLLTHGEEKFQCPECPMKFRSKNYLAKHLRSHAPAKRHVCDVCAASFSRKDTLTAHKFKHTGLRPFKCEECSLSNLLEIKVNTSDDIKPKRKYHRKKPLNRAKSCKTCSECNETFSTGSHLTRHMSVHSMQNEFVCNICQYRFTSERRLKSHMSSKHMGLEISLTGGPYPCPDCTLVFEQTRALAAHRVMHMKRDFKCEVCGKNCKTLAAVTRHMHAKHPSILPHKCQMCDQAFSVESHLNDHINEHLGQKKYKCDMCEKSFPNTTVLKEHLRSHTGESPYLCPHCGKSFKTANILRGHLQRHGEKNVQCSECPMKFNTKENLYKHMTTHSKEKPHVCDECGSAFKRQDTLKAHKFNHTGLRPFKCEECNFSFVLKRQLQKHQITHTGKKPHKCTYCDRAYASSGDLVKHLRTHVGEKTYFCDECPEAFKYLNDLKDHKSQHYKKKLALQGNSDQKGIDDIKDAKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -