Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_949748255.1
Location
OX456523.1:124636245-124647598[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.7e-14 2.3e-10 41.5 0.0 1 45 19 64 19 64 0.97
2 2 1.2e-18 3.6e-15 56.8 0.0 1 43 505 548 505 550 0.95

Sequence Information

Coding Sequence
ATGAAaaTTAAATCATCACGTGCTACACCTGTTCCTTCAACACGTCGCACTTATAGTGAGGAAGATTTAAATAACGCTCTACAGGAAATTCTCTCCGGTAATCTGGGTACACGTAAAGCGGCCGCACAATTTAATGTACCACGTTCCACCTTACGCAACAAGATCTACAAACTAACTACCGAGGCGAAACGAAATAACGATCAGGCTGCTCCCGAATTATTGCAGTTGCAACAAGAACTCGAAAAGGAAATGTCGGGCGACGAGGTTGAAATGGAGAGTAACTCTTCAACACCTCAACCTGAAGATGTGGTGGTTACACGTATCTCAACACCTAATTTGCTTAAGAAATTAGGCAGTAGTAATGTCGAATTAGGGAACGTTGGACCATGTACATCTGAAGATCTTTCTACGTTCTTACACTCCTCTCCAAAACCAGCCCATGTAGAATCCTCGAAACCTTTGACAAATGATGTTGGTCTAGCTGATGTTAACACACAATCGCAACAAATGCCAGCCCTGGATGCAGCTTTACCATTATTGTTACAAACACTGTTGCTATCCGATAAAAATTTACGTGATCTCTTTAGTGCTCTTCTATTGAATTCCACAATTAACCTAAAAGACATACTACTGGGAGCAACAACAGCTGCTAATAGTGCCGCTGCTGCGGGTAGTGAGAATAGTAATCTCAATAATGGTAATCAACAACAGGACTATCGTCCGCTTCTACAACTACTActacagcaacaacagcagcagcaacaacaacaaacgacATTTGTCACTGGTCGCCGCTTACCAAAGTCTGATACACCTGAAACCAACTCTTCGCTAGATCCCAATGAGGCCTGTGATGATCCATCGGCGATATTAAAAATTCCGTCCTATACTCCAGTGGCTGGACCTTCGAACTCAATGGGACCAAGTAGTTCCTGTGGTTCTCCTGCTATACTGTGTCACaacagcaatagcaatacgaatgTTAATCGCAATGGTGGTCCCGATAGTCCCGGTCCGTTATTATTGGCGGCGGCGGTAACTGCCGCCCAAAAGCAATTGGGTAATAAAAATCTCTCAGTAACACCACCTCTACTGCACGCTGGAGTCGATACACAATCTCCACAGTCATTGAGAATGTGTGATGTTATTGCCAATAGTATACATCGTACCATGAATGAACAGGCCAATAAAGATAATGTGCATGGTGGTTCACATTCGTTACTCGGTTTGGGTTCGGACGTAGATCGCTCTAGTGCGATGTCATCGATGGTGGGGGATTATAAAAAGCCTACCATATCGGTAGTAAAGAATATTGGCGGTACCGACACCTCTCGCTTTGGTACGGCTCCCAATCTATTAGCCGCCGCTGTAGCTCACAAttctcatcatcatcaacatcaatcTGCTCATTTACAACATGCCCACCACCATCATCATCTCAGTCGCCAGGAAGCCGCCGCCTTAGCAGCTGGTAAAGGTACTCGACCCAAACGTGGTAAATATCGTAATTATGATAGGGACAGTTTGGTAGAGGCTGTCAAAGCTGTACAGCGCGGAGAGATGTCAGTTCACAGAGCTGGTAGTTACTATGGAGTCCCACATTCTACACTAGAGTACAAGGTAAAAGAACGTCATCTAATGAGACCGCGTAAGCGAGAACCTAAACCTCAACCCGGCCTAGATGGTAGTAGCAATAGTTCAAAAACCAATGCCAACATTCCCGCAGGACTTACGGGTCTTGATAAATTAAAGGCCGGAAGTAGTGCCAGTGCCAATATGAAATTAGGCAGTGTAGCTATGAAAAATAATGGCGGCACTGGTGCAGGAGCATTTCCGGGCAATGCCGCCAATGGCATGAAACTGCCAATATTCGATCCCGCCTTAGCCCACTTGCCGTATACATCACCGCTATTTTGGCAACATAATCAAGCAGCGGCTTTCAGTCAACTGCAAATGGATTTCAATCGTAACACAACTAACCCCAGTAGTACATCACCAACCGAAGCGAatagtgatattttaaaatcgcATATGCAAAGGTATCAAGATTTGACGACGGGTGGAGGTAACGCTACCACTAACTCGTCTAACAACCCCAGTCCGGTATCGAGTCCTATTCTCTCAGGTCAAGATATAAATAGAGCGCGAGAGTTGTACGAAAGTAGTGCGGCTAATGGAGCCTCTTTTCTGGATGGCATCATACGTAAAACCCTCGATCGTAAAAGTAGTGAAGGAGCTTCGAGCAGTACGAGCGGCGGGGTTTTACTAGATCAATTGCTGATGAAAAAGACCCCCCTACCATTTACCAACAATCGTAGTAATGAATACAATAGTCTTTCTCCCACTCATCTAGGTGGAGGAGCATCAAAAAGATCGGCAAGTCCTCTCTCTTTAAGTGGCACCTCAATAAAAAGAGAACGCAATTCACCTCATAGTGGCGGCAGTGATGAAGATGAAACCTCACAAAGTGGTTTAGATGagaattatgaaaataataacaataaaagtgCGGTTTTAACGTCCAAGTCTATAATAACACCACGTAGTCGTATTGGTTCTCGGGATTCGGCTTCGGAAACCGATAATAGTAGTATAAAAAGTGAACTACAAATGACCAACAATCATCAACATCACAATAACGGCAACAATACAAATCTGCCCGATTTAAATGGTGGCAATACTATACAAGTTAAATCTGAAATTCCTACACTCGAATCTGGCACCTCTATATTACAAGAGAAACTATCACAAATAAAGGCGGAGCAGCAAGAGAGCGAAGAAAATTTATAG
Protein Sequence
MKIKSSRATPVPSTRRTYSEEDLNNALQEILSGNLGTRKAAAQFNVPRSTLRNKIYKLTTEAKRNNDQAAPELLQLQQELEKEMSGDEVEMESNSSTPQPEDVVVTRISTPNLLKKLGSSNVELGNVGPCTSEDLSTFLHSSPKPAHVESSKPLTNDVGLADVNTQSQQMPALDAALPLLLQTLLLSDKNLRDLFSALLLNSTINLKDILLGATTAANSAAAAGSENSNLNNGNQQQDYRPLLQLLLQQQQQQQQQQTTFVTGRRLPKSDTPETNSSLDPNEACDDPSAILKIPSYTPVAGPSNSMGPSSSCGSPAILCHNSNSNTNVNRNGGPDSPGPLLLAAAVTAAQKQLGNKNLSVTPPLLHAGVDTQSPQSLRMCDVIANSIHRTMNEQANKDNVHGGSHSLLGLGSDVDRSSAMSSMVGDYKKPTISVVKNIGGTDTSRFGTAPNLLAAAVAHNSHHHQHQSAHLQHAHHHHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSNSSKTNANIPAGLTGLDKLKAGSSASANMKLGSVAMKNNGGTGAGAFPGNAANGMKLPIFDPALAHLPYTSPLFWQHNQAAAFSQLQMDFNRNTTNPSSTSPTEANSDILKSHMQRYQDLTTGGGNATTNSSNNPSPVSSPILSGQDINRARELYESSAANGASFLDGIIRKTLDRKSSEGASSSTSGGVLLDQLLMKKTPLPFTNNRSNEYNSLSPTHLGGGASKRSASPLSLSGTSIKRERNSPHSGGSDEDETSQSGLDENYENNNNKSAVLTSKSIITPRSRIGSRDSASETDNSSIKSELQMTNNHQHHNNGNNTNLPDLNGGNTIQVKSEIPTLESGTSILQEKLSQIKAEQQESEENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00892649; iTF_00370893;
90% Identity
iTF_00892649;
80% Identity
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