Ehis017920.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- -
- Assembly
- GCA_949748255.1
- Location
- OX456524.1:27149720-27152544[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-07 0.00038 21.5 0.0 8 38 395 425 392 428 0.87 2 4 4e-13 1.2e-09 39.1 0.0 5 44 446 485 443 486 0.93 3 4 0.02 58 4.9 0.0 27 37 515 525 511 531 0.88 4 4 7.7e-16 2.3e-12 47.9 0.0 4 41 554 591 554 593 0.92
Sequence Information
- Coding Sequence
- ATGAATCATTTAAAGTGGATGGGACACTCGGCTACCATATTAgatatacataaaaacttacGAGCTGACTTGCAAAGTTGTGAAGTTACTTTGGTGGCTAAGGGACACTGTGTCAAAGTACATCGTTTTATTTTATCCTCATGCAGTGACTTACTGCGCGGACTTTTAAGTGATATACCCAATGGCCAAGAGTGTTGTGTAATGGTACCCGATATAAAAGGTCATCTACTGGATAACGTATTAGCCTTTATTTATTTGGGAGAATGTTCGTTATCTTCGGCAAATTTATCAGAATTTTTGGAAGCCATTAATATATTGGGCATAAAGAGTGCCATAAGTTTTGAATGTAATACAAATACTTTGCAGACAGCACAACATAGCAATGAAGAAATGGTTGGTAGTATATCTAATGCTATTGGTGATGGGGATGCTGCGCCTACAGTAATGCCAGCCAGAGTGGAACCAAGTGTTAGCCCTGATGTTTCTCTACATCAGGAAGAATTGATGGAAACTCAAAATGTTATGCATTCGGGTGAACAGACATCAAATACAAATACTGCTAATACTACTGGTGGTAGCCGAGAATTGGATTTTTTAGATGTTTATCATGAGCCGCAACATAAAATTACATATTCCATAGAACATCTACCCGGAAATAATACTggtaatgaatttattttgacCGAAAACTCTGGTACTTTTACATTGACTCATAATTCTAAATTGGAATCGTCGTCACGTGCTGACTCCACTAGTATGGAAGTAACGGAAGATGATGGATGCGATTCTCATATAATTGAAGAATATAGCAGTGGTGATGAACGTCTTATACAAATTGACGAAAGAGgATCGGAACAAGCTATTACCGTAGCCGAAGCAGTTGCACCAACTCCAGCAGTAATAACGCAAACTATAAATAATCCCACAGCATCGACTTCATCTACATCAATTATACAAGTGAAGCCTAAGTTTAAGGCTTTTAAAGTAAAGTCTTTCTCGACTTCAGCGCAAACTATACCCAAATTGGAGCATTCCAACAATACTACGACTACAAATGATTCTATTTCTATAATGCAAACTTCTAATGAAGGTTTTACTTTACTCAAAACTGAGCCTATGCTAACGAATAATGAATCTGATGAATTTTCAATGAATACAACTCACGTTACAACTACGGATTTAGCTTATCAAGCTATGGTAAATGAGGGATTGTCTTTGCCAAAGGCAGcagttaaatttaatgtttccaAAACGGAATTATGGCGTCGTGTACGTTCTTCGGgtgtagaaaatttatataaatcaccCAAATTAGATCCAGAGAAAATAGATGTTATTGAATTGGCCTCTAAAGCGGTAATTAATGAGGGTATATCGCTACAAAAAGCTGCTTTACGTTATGATATTTCTAAAACGGTTTTATGGCGAAGAGTTCGCAAACATCCCGAATATATGAAAACAGCACGAGAAAATCCTATAATATCTAAAGCCTATGAACGTTTAAAATCGGGAGAATCTCTTAAAAGTATATCACAAGATTTAGATATACCCATGTCGACGTTGCATCGTCATAAGGTGCGTCTCTCCCTGATGGGTCAGCTACCTGAATTTGTAACGTGCAAAAGACGCGATAGCATgtctaaaaatgatttaaaattaaaacttgccAAAGCGGTTCATGCCTGCGTCCACGAGGGTATGTCCCAAAATCATGCtgctaatttatttgaaatttccaaAAGTACTCTATGGCGTCATTTACAAAAACGTGTTGCTGAAGCTGAGGCTGCCGAAACTTCAGAAGGTGCCGAACATTCTGAATCTATGGGTGAGGAGCATATAATAAAAGAAGAagttattttatcttaa
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRADLQSCEVTLVAKGHCVKVHRFILSSCSDLLRGLLSDIPNGQECCVMVPDIKGHLLDNVLAFIYLGECSLSSANLSEFLEAINILGIKSAISFECNTNTLQTAQHSNEEMVGSISNAIGDGDAAPTVMPARVEPSVSPDVSLHQEELMETQNVMHSGEQTSNTNTANTTGGSRELDFLDVYHEPQHKITYSIEHLPGNNTGNEFILTENSGTFTLTHNSKLESSSRADSTSMEVTEDDGCDSHIIEEYSSGDERLIQIDERGSEQAITVAEAVAPTPAVITQTINNPTASTSSTSIIQVKPKFKAFKVKSFSTSAQTIPKLEHSNNTTTTNDSISIMQTSNEGFTLLKTEPMLTNNESDEFSMNTTHVTTTDLAYQAMVNEGLSLPKAAVKFNVSKTELWRRVRSSGVENLYKSPKLDPEKIDVIELASKAVINEGISLQKAALRYDISKTVLWRRVRKHPEYMKTARENPIISKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSLMGQLPEFVTCKRRDSMSKNDLKLKLAKAVHACVHEGMSQNHAANLFEISKSTLWRHLQKRVAEAEAAETSEGAEHSESMGEEHIIKEEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00892892;
- 90% Identity
- iTF_00716861;
- 80% Identity
- iTF_00716861;