Ehis042317.1
Basic Information
- Insect
- Eustalomyia histrio
- Gene Symbol
- retn
- Assembly
- GCA_949748255.1
- Location
- OX456527.1:76520569-76559308[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-20 5.9e-16 60.1 0.0 9 89 6 82 3 82 0.91 2 2 2 1.4e+04 -2.0 0.1 12 27 222 239 206 260 0.49
Sequence Information
- Coding Sequence
- ATGTGTCATTTTACGCTTGAAGAAAGTTGGGAAAGCACACCCATCAATCGTTTACCAATTATGGCTAAATCAGTATTGGATCTTTATGAACTGTATAATTTAGTAATTGCTCGAGGAGGACTTGTAGAtgttattaacaaaaagttatgGCAAGAAATCATAAAGGGTCTGCATCTACCATCGAGCATAACAAGTGCAGCATTTACACTAAGAACACAGTACATGAAATATTTGTATCCCTATGAATGTGAAAAGATAAATCTTAGCACACCTACAGAATTACAGGCAGCAATTGATGGTAATCGTCGTGAAGGTCGTCGTTCTAGTTATGGCCAATACGAAGCCATACACAATCAACTgcaaatgCCTCAGATGAATCGTCAATCTCTGCCTGGTGGTATGCAACAAATGTCACCTTTGGCATTGGTCACACATGCTGCTGCGGCTAATAATCAACAAGCACAGGCTGCTGCTGCGGCCGCTGCAGCTCATCACCGACTGTTGGCACCCTCATTTAGTCAAGTGCCAAATTTAGTGACCCAAGAAATTGAACAACGCATgattgaatatataaaattactacaagtaaaaaaagatgGTTCGGCGGGTGCAATGGGTCTGTCGCCACAccatcagcaacaacaactacaacagcagcagcaacaccaacagcagcagcaacaacagcgcCAGACATCACAAAGTCCTGATATAAGTACAAGGGAGGCTTTAAATGCATTGGAAATGTCACGTGTGGCATTGTGGCAAATGTATAATCACAATACCAGCCCACCAGCATCGCTTAACACCTCACCTCAGGGTGGTGAGGGCGCAAATAGTAGTGGAAATGCTGGTGGCGAAGCACAATGCGGCGAGGCGTTAAACTTGTCAGATTCACTACCAATGAAGAGAGAGCGTGTAGATGAATCCAGCCAGGAAATGAATGACAGAGATGATTTTCACGAGCAACCACCTCCTGCAAAACGTGCCGGCTTTCCGGTCAGCTTTTATTTACCACCCGGTATGAGCGGTATGGCTGCTGCTGCAGCCGCAGCGAATTTCCAATACCAAAGTGGTCATCATGCATCTGACGGCGAAGCCGATGAGGAAAATGATGATGGCGAACACAATACAACAGAAAATTCTGCACATGACGACCATCATGATGAACCTCAGCAAATAAATGGTGGATCTGGTCGACCCCTACGTTATCATGACAGTGTTCATAAAGAGAAGTCTGACGATTCGGCAATTGAAAATTCACCCTCCACCTCTGCTGAATCTGCTGGTGGTCATATATCACCAGTgtctactaaaaaaaattatttgttaaaacaatCACTACAACACACAACCTCCTCCAAACGAAATAATGAAACTGTGGGTAGCAACAATATGGCAACGGGCAACGCTTCGTTAGGTCCATTTGATGCATTGAACCTTCTTTCCGGCATGCAATTTCGTGTAACACGTAATGgcGAACAACAGTTGGAGGTTAACCTTGAATTAAATGGCATCAAATATTCCGGAGTGCTTATTCCGAATACAACAAATTTACCACCATCTCCATCATCACCACCATCAGCAACATCGTCGGCGATGACAACATCGTTAATGAATCAAAGCAGCATCAACAGTTCTTCCAACAATGCGGAgaataacattaataaaaactgCAGCAGAAAGACAGTCAACAGCACCCACAACTTAAATAGCACAGAGACTATGAAAGATTTAGTCATTGCCACGGATGCAATGGAAGACACAAATGAACTGTCAGTGCATGAAACGGAAACATCACCAAAGACAACAATGACGACAATGGTGACGATGAATCAAACTACAAATGCTGTCATGTCAAATGATCCCAACACAACATCTAAACTCAAGGATGCCCCAATAACATCACAATCATAG
- Protein Sequence
- MCHFTLEESWESTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKINLSTPTELQAAIDGNRREGRRSSYGQYEAIHNQLQMPQMNRQSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHHRLLAPSFSQVPNLVTQEIEQRMIEYIKLLQVKKDGSAGAMGLSPHHQQQQLQQQQQHQQQQQQQRQTSQSPDISTREALNALEMSRVALWQMYNHNTSPPASLNTSPQGGEGANSSGNAGGEAQCGEALNLSDSLPMKRERVDESSQEMNDRDDFHEQPPPAKRAGFPVSFYLPPGMSGMAAAAAAANFQYQSGHHASDGEADEENDDGEHNTTENSAHDDHHDEPQQINGGSGRPLRYHDSVHKEKSDDSAIENSPSTSAESAGGHISPVSTKKNYLLKQSLQHTTSSKRNNETVGSNNMATGNASLGPFDALNLLSGMQFRVTRNGEQQLEVNLELNGIKYSGVLIPNTTNLPPSPSSPPSATSSAMTTSLMNQSSINSSSNNAENNINKNCSRKTVNSTHNLNSTETMKDLVIATDAMEDTNELSVHETETSPKTTMTTMVTMNQTTNAVMSNDPNTTSKLKDAPITSQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -