Basic Information

Gene Symbol
Arid2
Assembly
GCA_949748255.1
Location
OX456523.1:225406293-225421229[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-26 7.2e-23 82.2 0.0 2 89 71 156 70 156 0.94
2 2 6.1 4.4e+04 -3.6 0.5 49 74 1165 1189 1157 1195 0.61

Sequence Information

Coding Sequence
ATGCTTTTAAAAGAATCGATGAAATCGTCAAATATCACACATTTAAATGAAAGTGGAAGTGCTCCGAATACCATTGGCGTCACCTCTGCCAACGCTGCGGGTTCTGCAACTACCGGAACACCGAGGTCGCGCAATTCAAACAGGGATAGACAACAATCAGATGATAAacaagaaaatacaaatattaaggGTAAAAATCCACCAAAACCTCCGGAAGAATTTTACAAGGATTTACAACATTTCCATGAGAAAAGAGGTACCACAATTATGAATGCGCCCAAAATAACTGGACGTGAAGTTGATCTTCATCGTTTATATTGCGAGGTAACCGAAAGAGGTGGTTTTCAAAAAGTCAACATCAGAGATGAATGGGATGAAGTCTTACCCAAATTAGGGTTAAAGGAGAAAATCGTTAATGGATCGCAAGCACTAAAATACATATATCGtcgtattttagaaaaatatgagcgtttaaattatttcggtGAAGATCCAGATAAAATTGATGCCGTGGATTCCATGGATATGACAGAATTTAATATGAGTGGGGGGCGAGGAAGAGGATCAAGATATCCATCAACTTATGGTAGTTCCAACACGGCCATAATACACAGTGTAGCCATGTCTTACAACTATCGGCAACATAATGTTAATATGGATAGAAGAAGACAATATAAATTATCTACTGACTTGCACAAGCCGTcagcatatgaaaaattaatgcTATCACTATTATCGCCGCTGCCAAATGAACAggattttgctataaatgcttGCACATTAATGGCTAATGAAAGCAAACATacattgaaattaaatgaatatcCCAAAATATTGGATGCTCTATTGGCACATACAGGTGTCTTCTCCGATTATACAAtgagaaaattatttcaacacaTTTACAGTGGTGTCAGACATCATTCCCTGTATGGATTTTGGTATGATCTCTTAAATGATAAACCACAAATATTGGAATTATATACCGATGAACAGGCGTTGCGAGATGCCGCCCTTATCGATGATTACGATGATGGCAAACCAGAAATGGAAGGAATATGGGAAGATTGTAAAGAATTGGATTTCTTAAATTTACGCACCGGATTGGGTACCCAGGATTATGTGGGTCAAAGAGTTTTACAGGTTATAtcgatattaagaaatttaagttttctggAGGAAAACTtgatgattttaataaaaaatagaacatttttacgatttttggtAATGAGTGCAAATATACGTTGGGATAATGTTCATATACATGCCTTGGAAATTGCTGGCAATATAGCAGGAGAATTGGAAATACAAGATCCCTCCCTCGATGATTTATCACGATGTCTTATGGCCACTTTGTGTGATGGCATTGAAGGACCCGATAGAGGTGTTGTTATCAATTGTCTGgagattttatataaactcTGCCAAAAGGATACAAATGAggaatatgtattaaaatgtttaaatgtaaatttctaTAATACCATAGCTATGTTTTTATCACTCAATGACATAAtgcttttgctatttacattagaAGCTATTTATGCTTTAACCAGTTTAGGACCTAAAAGTTGTTCTTCTATGATGCAAGTTAAGGGTATAGTTGATCAATTGATATCACTGATAACGGTAGAGGCGCCATCATATGGTCCAGATGGTTGTATATTAATGCGAGTAGTGGAAACTGTACCTGGTAATATGCTGCCAATGGTGGCGCAAAATATTGCCAATTTACAAAATGCAGCCGTCATACACAAACAACCACAAGCTGCGCAACAAATGGTGACACAAATTTGTGCACCTACTGCAACACAAGCCGCAGATGGTATAGAATCAGCTACTGATTCAGCCCAATTACAAATGCctcaaaattttacacaagAAGATGAACAATATGCTTTAGCTTGGCTGGGGGCCACCTTCGAAAGAGCCAATAGCATTGAGAGTCATATTGAGGCACAAGAATTATATCGCATGTATTTGTCGCACTGTCAAAAATCGGGTAAACATTCAGTAGTTAATCATATACATTTTCCCAAATTGGTACGGTTAATTTTTACCAACATAGTAGGTCCGGCTGTGGTAAGAAAAACTGATGCTCCAGACTTGCCGGGATTACATTATGTCTCTATTAGATTAAGAGCTCAACCGTTGCCGTTGCAACAAAAAACCAATGTAACAACAGGAGGTCAGACATCTCCCGGCGGCAAGCAGACAGAAAATTTGGGATCTGgtagaaaaactaaaaagaaattaaaagctCAAGTGGAAACAACACAGGCTAATACAACAGCTTCGATTACCGCTGCAAATACATTAAGTGATAGTAATTCAACTGCTATGGCTAAGGAAACAATTAAACCTGAATCCATTATACAAACCACTGTAGTTCCTGCTGGGGATGATTCCGAAAAACCTTCAACTCAACATATTGAAACAAAATGTGAAGAAAAAATGGATATAGATGACTTGGAAGAGACTATTAAATCTGAAAATCAACCAGAATTCTTGCAAATTACGGAATCCACTACAATACAGTCCTCTTCTGCGGGTACTCCAAGTTCTTTAGTCAAAAGTTTGCTAGCCAATAAAGTCAATCAaagacaacaaaaacaaaatatcaacaCAAATACTCCCGCAACTACAACTTCGAATATCACAAATCCTCCTCCTCCGCCTCCTCCTCCACCTTCTGTTATAACAACCGCCACAACACAGCCTCTAGCACAACCCATTAAGGTAGCCAGCGCGGCTATTACTTCCTTGGTTAATAATCCCCTGATGCAGCATACTCCGCTGAAAGTAGGACAAACTACCATTAAACCTTTAAATCCCCATGTGGCATTGGATAAAAAACCTATATCGGAATCTACCCCTCCCCCTTTGGCTCCACTAAGTGGTGCCAATGTTGTCAAAGATGCTTCTGGAAGACCTATAATATTGGCTAATCAAATGTTGGTggatattttggataaaaaaatggTAGATCCTCCCATACCGGGTATAATACAAAAACGTAAGCTCGAAGAACAATTGGCCAATAGTAAACGTTTAGCAGTAGATTCTTCAGTTACCAACACCAACACCTCATCATCAGCAACCCCTTCCTGCTCAGGCAGCACTATCGAAGAAACACCAGTAACGCCCTCAAAAAATGCGGCCAATTTATATGCTGAAATGGCAGCATCTATACTAGAAGATGAAGATCTTGAAGAATTTAACACACAACCACCACCAatggaacaacaacaacaacaacaatccaTGCAACAACAGACTCCTCTAATAATACCAGCTAAAACAATACAGCAACAACAATCTTCGACTCCACGTCAATTGCTATTTCAAACTAATCAGCcgcaacaattaaaacttacccAAACGACCACAGGAAACAATCAACAAATTCCAAATGCAGTAGCTACCATAAAAACGGATCAAGGATTACAAACTGTTCCAGTTATACTACAACAAAAACCAATGGAAGTCCAacatcaacagcagcaacaaataATACAACAAATGATACAACCAactcagcagcagcaacaacaaacacaaTATGTTTTAGCAACAAATCAACAAGGACAAACGTACTTGGTGGCCCAACAAACTCAAGTACCACAGTCTCAACCACAACAATCACAACCAACACAAACAGTATTGGTAACACAAACACCACAACAACAGACAACGGgacaaaaaactataataatcTTACAACAACAAACAATGCCAGGACAACAGCAACAGATTATCACGACCGGACCAGCAGGACAGGCCCAAAAAATGATAATGACCACAGCACAAGGTCAACAAGTGTTGGTTACACAAAGACCACAAACcccacaacaaatttttataaatcctcAAACAGGACAAGCGACTCACATACAACATATACAACCGatgccacaacaacaacaacagcagcagcaaaccagacaaataatacaaacaactacagcacaacaacagcagcagcaacagcaaacACAACAAATACAAGCGGGACAAATGTCTCCCTCTTTACTcaatcaattaaatcaaataccGGCTACCATAAAACTGCATCAACCCATACCCCAGCAATCTACACAAACAACATCGCAACCAGCTACTATTACACGCATGGGACAAAAATTATCAATAGTACAAGGTAGTGGTGGTGCACCAGCACCACCAACATCATCCTGCACACCATCCGCACCTGTAGCTATACCACAGCTACAACAACATCAATCTATAATACAGCAGCATATAATATCAGGTCCAGCCGAAAAACGTCATGTAATTTTAGGCGGTGGACGTGCTATAGAAATCAAAGAAACTGTTATAACCCAGGCGCAACCACCACCACAACAATGTCAACTTAATTCTCAAACTATAATAACAACACAACAACCATCGGTGGTTACATCATCATCCTCCGCGTCCTCCACCTCCTCCACACCACCACTTTTGCAACAACAACAGGTACAACAACAAATTCGTGCTGTTATTGAACAACAGCAACACCCCTcgataatacaacaaaaaatttcttcgtTGTCTGTTATGCAACCaccaccacaacaacaacaccagcaacaacaacaccagcaacaacaacagacaCAGCCACAAAGTCAAGTATTTGTGCAAGCATCTGTTGCTGCACCCACAATACATAATACACCACAATCCCAACAAACACCGACGCATATAGCGACTAagCTACCGGATCCAACACCATCACTTATGCAACCTAAGACACAAAGTTTGGTACAAACTATTGTACCATTGGCTGCTGCAAATAATCCACCAACTctgataaatgttaaaaaaccacCAAGCTTAATAAAGCCAACATTACCAACCGTGAAATTGCCCACACTTGCTAACCCAGGACCCCCACCATTGGCAGCAGTTAATAGTAATTCAAATATAAACACAACACAAGCCGCACACAAACCAACACAAGCGGATTCAGTGAAAGATGCGAATAAAAAAGAGGAAGTATCCCAAATTGCAACTATATCAGCAGCAGCACAAAATCCTATTCAAAGTGGTGTTAGCTCACTAGTTAATGCCACAATGTCGTCTACTACACAAGCAGATCAAACTTTGACGACCACAAGTTCAAGCACATCTAATACTACAACAACTACTTCACAAACTCAACAACAATCTGGCCAAACACCACAGCAGCAACAACTACAAACATTACAACTACAGCAACAATCTTCTGTTCCGCCACCACAACCCCAATTGTCGACGGCAGAGGCTCAATGGCTTTTCATTTGCGATTGGCGTAACTGTCcacgcaaaaaatttaaatcaatgtcTGATTTACAACATCATGTTTGCACCTCACATGCACCAGACCATTTAGAGCCATCGGCTGAAATCTTTTGTCAATGGGGTGTTGGTCCAGGTCTTTGCGATGGTATACCACGTAAACGTTTTTCTCTTATGACACACTTAATAGATCGTCATTTAACAACGGAAAGTTTAAGATCAGCTGTTCAACGAAGAATTGCCACTGGCATTCATAATATATCACCTTCAAAGGCACCCGTAACTATAGTGCGTAATACAGAGGTAGTTCTAAGAGCTAACAATGCCTCCCCAGCTCCCTCTACTTCATCATCATCCAGTTCTCAAACACCCGCCACTGGGTCATCAGCATTGCAAGCTATAAAGCGTCATACCGCTGATTTTATGAACTCCAAAGAGTTATTGGATGATAGTGAGGGTCCCGTTACGAAGAGTATACGTTTAACAGCTGCATTAATCTTACGTAATTTGGTTACTTATACTACGACGGCAAAACGTAGCATTCGACGTTTTGAGCCTCATTTGGCAAATATCGCTTTAAGTAATGTCGAATCTAGTGGCACTATATCTCACATACTCTATGagttaaataactaa
Protein Sequence
MLLKESMKSSNITHLNESGSAPNTIGVTSANAAGSATTGTPRSRNSNRDRQQSDDKQENTNIKGKNPPKPPEEFYKDLQHFHEKRGTTIMNAPKITGREVDLHRLYCEVTERGGFQKVNIRDEWDEVLPKLGLKEKIVNGSQALKYIYRRILEKYERLNYFGEDPDKIDAVDSMDMTEFNMSGGRGRGSRYPSTYGSSNTAIIHSVAMSYNYRQHNVNMDRRRQYKLSTDLHKPSAYEKLMLSLLSPLPNEQDFAINACTLMANESKHTLKLNEYPKILDALLAHTGVFSDYTMRKLFQHIYSGVRHHSLYGFWYDLLNDKPQILELYTDEQALRDAALIDDYDDGKPEMEGIWEDCKELDFLNLRTGLGTQDYVGQRVLQVISILRNLSFLEENLMILIKNRTFLRFLVMSANIRWDNVHIHALEIAGNIAGELEIQDPSLDDLSRCLMATLCDGIEGPDRGVVINCLEILYKLCQKDTNEEYVLKCLNVNFYNTIAMFLSLNDIMLLLFTLEAIYALTSLGPKSCSSMMQVKGIVDQLISLITVEAPSYGPDGCILMRVVETVPGNMLPMVAQNIANLQNAAVIHKQPQAAQQMVTQICAPTATQAADGIESATDSAQLQMPQNFTQEDEQYALAWLGATFERANSIESHIEAQELYRMYLSHCQKSGKHSVVNHIHFPKLVRLIFTNIVGPAVVRKTDAPDLPGLHYVSIRLRAQPLPLQQKTNVTTGGQTSPGGKQTENLGSGRKTKKKLKAQVETTQANTTASITAANTLSDSNSTAMAKETIKPESIIQTTVVPAGDDSEKPSTQHIETKCEEKMDIDDLEETIKSENQPEFLQITESTTIQSSSAGTPSSLVKSLLANKVNQRQQKQNINTNTPATTTSNITNPPPPPPPPPSVITTATTQPLAQPIKVASAAITSLVNNPLMQHTPLKVGQTTIKPLNPHVALDKKPISESTPPPLAPLSGANVVKDASGRPIILANQMLVDILDKKMVDPPIPGIIQKRKLEEQLANSKRLAVDSSVTNTNTSSSATPSCSGSTIEETPVTPSKNAANLYAEMAASILEDEDLEEFNTQPPPMEQQQQQQSMQQQTPLIIPAKTIQQQQSSTPRQLLFQTNQPQQLKLTQTTTGNNQQIPNAVATIKTDQGLQTVPVILQQKPMEVQHQQQQQIIQQMIQPTQQQQQQTQYVLATNQQGQTYLVAQQTQVPQSQPQQSQPTQTVLVTQTPQQQTTGQKTIIILQQQTMPGQQQQIITTGPAGQAQKMIMTTAQGQQVLVTQRPQTPQQIFINPQTGQATHIQHIQPMPQQQQQQQQTRQIIQTTTAQQQQQQQQTQQIQAGQMSPSLLNQLNQIPATIKLHQPIPQQSTQTTSQPATITRMGQKLSIVQGSGGAPAPPTSSCTPSAPVAIPQLQQHQSIIQQHIISGPAEKRHVILGGGRAIEIKETVITQAQPPPQQCQLNSQTIITTQQPSVVTSSSSASSTSSTPPLLQQQQVQQQIRAVIEQQQHPSIIQQKISSLSVMQPPPQQQHQQQQHQQQQQTQPQSQVFVQASVAAPTIHNTPQSQQTPTHIATKLPDPTPSLMQPKTQSLVQTIVPLAAANNPPTLINVKKPPSLIKPTLPTVKLPTLANPGPPPLAAVNSNSNINTTQAAHKPTQADSVKDANKKEEVSQIATISAAAQNPIQSGVSSLVNATMSSTTQADQTLTTTSSSTSNTTTTTSQTQQQSGQTPQQQQLQTLQLQQQSSVPPPQPQLSTAEAQWLFICDWRNCPRKKFKSMSDLQHHVCTSHAPDHLEPSAEIFCQWGVGPGLCDGIPRKRFSLMTHLIDRHLTTESLRSAVQRRIATGIHNISPSKAPVTIVRNTEVVLRANNASPAPSTSSSSSSQTPATGSSALQAIKRHTADFMNSKELLDDSEGPVTKSIRLTAALILRNLVTYTTTAKRSIRRFEPHLANIALSNVESSGTISHILYELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00892499;
90% Identity
-
80% Identity
-