Basic Information

Gene Symbol
Xbp1
Assembly
GCA_949748255.1
Location
OX456527.1:114052500-114054049[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-16 2.1e-12 48.3 16.7 2 65 80 157 80 157 0.98
2 2 8 1.8e+04 -2.8 0.2 36 46 206 216 201 218 0.53

Sequence Information

Coding Sequence
ATGTCAAAACAATCGGCTGTTTTTATAACAGTGCCCAAGTATGTGGCCATAGCACCAATACAGGCCACAATTGCTGGGTCTGATGTCTCAACAATCGGAAGTACAACTTTGCCTAAGATTAGACCAGCTCCTGCTCAGATTATTGCTacaaataattcggttgattCATGTGATTCCAGTAGTGAATCTACAGCAGCACCTAAAGGCAAAAAGAGACGTTTGGATCATTTAACATGGGAAGAAAAAGTACAAAGGAAaaaattgaaaaatcgtgTTGCGGCCCAAACATCACGTGATCGTAAAAAGGCCCGCATGGAAGAAATGGAACTTGAAATACAAGATTTAACGGAAAAAACTGAAATCTTAGTTAATAAATGTGACTCGTTGCAAGTCATCAATGATTCgctattgcaaaaaaatcaaaaacttgatATGGAAGTCGAGATCTTAAGACAGCAATTGCAAGAACtacaaaaacaacagcaacaacaacaaatgattGCCAGCTGTGCCGGCTGTGAGTCCTTACTCAATGGATCTGCAGTATCCAACAATACTGACCCTCTGCCGCAGGGTTCAAACCCCAAGGACTCACAGTCGTTTCAGGAGGCAATCACCCTGTTAAAGTTGAAGCAACAGCTGAAAAAGAGTGCAACAGTATCGTCTCTATGGCGTGTAATAGCTCTTTGCCTTCTCTACAAGATATGTTGTTACCCGACATCGAAATCGACGAAGGCGCGCTCGATGATGCAGAGTTTGATGCCGGAAAGCTGGAAGAACTTGCCGAAAGCCTGCTTGCCGACATCACCGCAGACTTGGAAGCAAGCGATAGAGCGAGCAATGCGTCTGTTGCCGAAATTGCAAGCAGAACAGAGCGATTGCTTGGATCAATGGTGGGGACCACAGCAGAGTGCTTGGAATCCGGCCAATATAAAACAAACTACAATGGCAGCTGCCTAG
Protein Sequence
MSKQSAVFITVPKYVAIAPIQATIAGSDVSTIGSTTLPKIRPAPAQIIATNNSVDSCDSSSESTAAPKGKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMELEIQDLTEKTEILVNKCDSLQVINDSLLQKNQKLDMEVEILRQQLQELQKQQQQQQMIASCAGCESLLNGSAVSNNTDPLPQGSNPKDSQSFQEAITLLKLKQQLKKSATVSSLWRVIALCLLYKICCYPTSKSTKARSMMQSLMPESWKNLPKACLPTSPQTWKQAIERAMRLLPKLQAEQSDCLDQWWGPQQSAWNPANIKQTTMAAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01313510;
90% Identity
-
80% Identity
-