Basic Information

Gene Symbol
GATA-B
Assembly
GCA_951802225.1
Location
OX637643.1:16078216-16086253[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-16 4.1e-13 49.2 3.9 1 34 206 238 206 240 0.97
2 2 3.3e-17 1e-13 51.1 6.5 1 34 274 306 274 308 0.97

Sequence Information

Coding Sequence
ATGCTCATACTCAGTGCAGAGGAGTGCGCGCGCGCAGCTTCCGGGCTCAGCGCGGCTGAGTCACGCCGCGCGCAAACAGAGTCTTTGTTCAGATGTTCTCGGCGCACGCGCAAGGTCGCCTGCTGCAACCAACAACCAAGTTGTGATCCACCGGCACGTCTTGCAAATGTGTCACACTGTAAACTAAGTATGTTATCAGTGAAATATTTGTGTTGCAGCGGCGGTGTATACGGCGCGCGCTACGCGGCCGGCTCGCCATACTTCAGCGGGGAGCTGGCGCAGCCGCAGCTCTGGGCCTCGCCGCAAGGCGGGTCGCCGCAGTACGCGGGCGTCTCCCCGCTGGAGGAGGACTACGGGGGGGAGGGCTCCCCCGGCTCGTCGGGCGGCGGAGGGGGAGGAGGAGGGGGAGGGGGCGCCCTACCCGCGTTCACGCGCTTCAACAGCAGCGTGGCGGCGTTCGCGACGCGTGCGCAGGCGTACGCTGCGCCCGCGCTGCCTTCAACGTACGCGCATCAGGAGCCGTGGCACCTGGAGCGGCGCCAGCAGCTCTCCGCCTCCGCCAGCCTCTCCGCAATGGAGGTGCCCGAGCTGGAGGTGTTCTCGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCGTGCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGCCTCTACACCAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGCcaccccgcgcccgccgcgccgcccgcgcacgACATGGGAGCCAAGCGGCCCGGCATGCTGTGCTCGAACTGCCGCACGGGCACGACGTCGCTGTGGCGGCGCAACGCGCAGGGCGAGACCGTCTGCAACGCCTGCGGGCTCTACTACAAGCTGCACAACATCAACCGACCGCCCACCATGAAGAAGGACTGCATACAGACGCGCAAGCGAAAACCGAAGACGGGCGCGCACGGCGGCGTGCACAAGATGCGCGACGTTAAGAAGCCCATCAAATTAGAAAACATGATGCTATCGCACGTCGAGTCCGCTCGGGGCGCGACGACGGGCGGGGGGAAcggcgcgggggcggcggggggaGTGGCTCTAGACTGGTACTACTCGCAGATGAAGACGGAGGAGCCGCCACCGGCGCACGCGCAACACGGCGGGCTGCCCGGGTTGTCCGGGCTGGGCGGCGGGCTGCCCGGGCTGGGCGGGCTGTACGAGGAGGAGCGCCGGCCGCCGCCCGAGCCCGCGCGCCTCGACCGCCCCACCGTCGTCTCGCTGGGCAGCTGA
Protein Sequence
MLILSAEECARAASGLSAAESRRAQTESLFRCSRRTRKVACCNQQPSCDPPARLANVSHCKLSMLSVKYLCCSGGVYGARYAAGSPYFSGELAQPQLWASPQGGSPQYAGVSPLEEDYGGEGSPGSSGGGGGGGGGGGALPAFTRFNSSVAAFATRAQAYAAPALPSTYAHQEPWHLERRQQLSASASLSAMEVPELEVFSEGRECVNCGAVHTPLWRRDGTGHYLCNACGLYTKMNGMNRPLKQPRRLVRQRHPAPAAPPAHDMGAKRPGMLCSNCRTGTTSLWRRNAQGETVCNACGLYYKLHNINRPPTMKKDCIQTRKRKPKTGAHGGVHKMRDVKKPIKLENMMLSHVESARGATTGGGNGAGAAGGVALDWYYSQMKTEEPPPAHAQHGGLPGLSGLGGGLPGLGGLYEEERRPPPEPARLDRPTVVSLGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-