Eaur021707.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637668.1:58363-64804[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 6.9 4.8e+02 2.0 0.7 1 8 12 19 12 21 0.88 2 21 0.071 5 8.3 2.6 1 23 39 62 39 62 0.94 3 21 5.5 3.8e+02 2.3 0.7 3 20 68 84 67 90 0.77 4 21 0.00049 0.034 15.1 1.0 5 22 112 129 109 133 0.89 5 21 2.9e-05 0.0021 18.9 1.8 1 23 141 164 141 164 0.97 6 21 5 3.5e+02 2.5 2.6 1 9 170 178 170 180 0.88 7 21 5 3.5e+02 2.5 2.6 1 9 181 189 181 191 0.88 8 21 5 3.5e+02 2.5 2.6 1 9 192 200 192 202 0.88 9 21 6.2 4.3e+02 2.2 3.6 1 11 203 213 203 216 0.85 10 21 5 3.5e+02 2.5 2.6 1 9 225 233 225 235 0.88 11 21 5 3.5e+02 2.5 2.6 1 9 236 244 236 246 0.88 12 21 5 3.5e+02 2.5 2.6 1 9 247 255 247 257 0.88 13 21 1.5 1e+02 4.1 0.5 1 9 258 266 258 267 0.91 14 21 1.5 1e+02 4.1 0.5 1 9 269 277 269 278 0.91 15 21 0.59 41 5.4 0.5 1 11 280 290 280 292 0.86 16 21 5 3.5e+02 2.5 2.6 1 9 302 310 302 312 0.88 17 21 1.5 1e+02 4.1 0.5 1 9 313 321 313 322 0.91 18 21 2.3 1.6e+02 3.5 2.5 1 11 324 334 324 337 0.86 19 21 0.0027 0.19 12.8 1.1 1 23 357 380 357 380 0.92 20 21 3.9e-07 2.7e-05 24.8 0.6 2 23 390 411 389 411 0.97 21 21 1.2e-05 0.00086 20.1 2.8 1 23 417 440 417 440 0.96
Sequence Information
- Coding Sequence
- ATGGAAAACCACCACAAGGAACACTTTTATATCTTCAAGTGCAATGTGTGCGACCATGAAACTCTGAAGTTAGATCGTATGGAGTATCATTGCATGAATCAGCACAAGAAAACTTATCGATGCCTACAGTGTTCGCAGGAGTTCAGCACGAACCACGCGCGTCGCTACCACGTCGACATGACTCACAAAGCGACAAAAAATTGTGACAAATGTGGCAAGGACATAAAAATACGCAACTACAAACAACATATAGAaCACGTTCGATTGCACGAGTCGAGTGGCAAGGAGAGTGGCGAGGCCAGTAGCCGAGCCAGTGAGGAGGCCTACTGTATAGAATGCGATAAATCTTTCAAAACTCGAAGTAGTTATAAGGAGCATTTGAAAGTTAGTCTGAAACATCGGGATGCCAGTGCGGTGAGATTCGAGTGCGACCACTGCAAGAAGAGCTACAGCCTGCGCGGCACGCTGGAGCGGCACGTGATGTCCCTGCACCTGCCGAGGGTCGGCTACCACTGCCCTGTGTGTGACAAGGTGAGTTGCTACCACTGCCCTGTGTGTGACAAGGTGAGTTGCTACCACTGCCCTGTGTGTGACAAGGTGAGTTGCTACCACTGCCCTGTGTGTGACAAGGTGAGTTGCTACCACTTCCCTGTGTGTGACAAGGTCAGTTGCTACCACTGCCCTGTGTGTGACAAGGTGAGTTGCTACCACTGCCCTGTGTGTGACAAGGTGAGTTGCTACCACTGCCCTGTGTGTGACAAGGTGAGTTGCTACCACTGCCCTGTGTGTGACAAGGTCAGTGGCTACCACTGCCCGGTGTGTGACAAGGTCAGTGGCTACCACTGCCCGGTGTGTGACAAGGTCAGTCGCTACCACTGCCCGGCGTGTGACAAGGTCAGTTGCTACCACTGCCCGGTGTGTGACAAGGTGAGTTGCTACCACTGCCCGGTGTGTGACAAGGTCAGTGGCTACCACTGCCCGGTGTGTGACAAGGTCAGTCGCTACCACTGCCCGGCGTGTGACAAGGTCAGTTGCTACCACTGCCTGGTGTGTGACAGGGTCAGTCGCTACCACTGCCCGGCGTGTGACAAGAGGTTCGTCCGCACGGACCGGCTGAGCGCGCACGTCGCTCACGTGCACGAGGGCGCGCCGAAGGTCAAAGACAAGGTCTGCTCCTACTGCGGGAAAGCCTTCTCGacaaCATCACTGTTAAAGATACATACAAGGATCCACACGGGGGACAAGCCGTTCAGCTGTTCGCACTGTGGGATGTGTTTCACTCAGAACGGGACCCTGCTGACTCATGTCAGAGGAGTTCATTTAAAGATTAAGAAATAG
- Protein Sequence
- MENHHKEHFYIFKCNVCDHETLKLDRMEYHCMNQHKKTYRCLQCSQEFSTNHARRYHVDMTHKATKNCDKCGKDIKIRNYKQHIEHVRLHESSGKESGEASSRASEEAYCIECDKSFKTRSSYKEHLKVSLKHRDASAVRFECDHCKKSYSLRGTLERHVMSLHLPRVGYHCPVCDKVSCYHCPVCDKVSCYHCPVCDKVSCYHCPVCDKVSCYHFPVCDKVSCYHCPVCDKVSCYHCPVCDKVSCYHCPVCDKVSCYHCPVCDKVSGYHCPVCDKVSGYHCPVCDKVSRYHCPACDKVSCYHCPVCDKVSCYHCPVCDKVSGYHCPVCDKVSRYHCPACDKVSCYHCLVCDRVSRYHCPACDKRFVRTDRLSAHVAHVHEGAPKVKDKVCSYCGKAFSTTSLLKIHTRIHTGDKPFSCSHCGMCFTQNGTLLTHVRGVHLKIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -