Eaur022034.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637668.1:3827285-3844357[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.2 14 6.9 2.5 1 23 277 300 277 300 0.97 2 11 0.0042 0.29 12.1 1.6 2 23 309 330 309 330 0.97 3 11 0.00052 0.036 15.0 0.7 3 21 363 381 362 382 0.93 4 11 0.22 15 6.8 0.4 3 21 390 408 389 409 0.88 5 11 0.00022 0.015 16.2 0.8 3 23 425 445 423 445 0.94 6 11 0.0003 0.021 15.8 2.7 1 23 450 472 450 472 0.98 7 11 0.0016 0.11 13.5 6.1 1 21 481 501 481 502 0.96 8 11 0.0029 0.2 12.7 1.6 1 22 514 535 514 537 0.88 9 11 0.0012 0.084 13.9 0.5 1 23 543 566 543 566 0.95 10 11 0.0077 0.54 11.3 0.7 3 19 580 596 578 601 0.90 11 11 0.0093 0.65 11.1 0.7 1 23 610 633 610 633 0.98
Sequence Information
- Coding Sequence
- ATGAAGGAAATCAATATTAACATCGAGGGATACAATGTGAACGGAATATGTGTGGGTTGTTTGAATTACAAtcgaaaaatgtattatgTTGACCAAGTAAAGGATTGCTTCAAATTACTCGCTGAAATAGACGTTCCAGATGGACTTACAATACAGGTGTGCTGGGAATGCCTTGCAGCTGTTCGGAAGGTTGTCGGCTTTCAGGAGCAGATACTGAAGTCTTATGATATCCTTATTCAATATTCTCGGAAgttcacATTTCTCAACTCACCAAAAGATCTATCACAGTATGCCGCCACCCGCCTTTCCGCATGTCACGTGTCAAATTCTAACATGGTCTTGATGACCGATGACGTAGTGAAGGAAGAGGAACTGGGAGAAATTGACGATTTGAAACTGGAGCCTGATAATGTTGATGTTGAAAAAACAATTTTAGAATATAATGTAGACATAAAAGACGAATTCGTGTACAATGAAAAGATTCAACTACCAGTACCGGACTTGGATGACGGTATTGACGTCATAAAAGACGGTATTGGCGTCAATAATGACGGTATTCACATCAATAATGACAGTATCGGCATCAATAATGACGGTATTGACGTCAACAATGACGTAGACGACACCGGACAGATGACGTCAGACGATGACGTCGTACTGTCCAAaattaagaagaaaaaaggGAAGAGAGCTGATAAGAAAATTAAGttagaaaagaaaaagaaatttaaaaatgatcAACCTTTCAGAgagATTCATTTAACGGAAGAGGAAATGTGGAAGTTAAGAAAACAGGACCTAGCCGACGAAGCATTTGTAAAACTGAAATACAAGTGCCAAGATTGCATCCTGAGCTTTCAGTCAAAAAAACTCATGGAGcaacattttaaaagtaaacatGTTaagACGAGTACTAAAACCGCCCAGTGTCCAACGTGCAGATCCTTCTTTGTCAACAATGTCCATCTAGCAAGACACACGGCGCGACACTTCCGCGGCTTCGCGTGCGTTCACTGCGACCATCGCTCGTCGTGCCGCCAGGTCGCCGCGGCTCACGCTGAGTCGCACCCCTTGCAGCCGATGCTTTGTTCCAGCTGCGGTGAGAGCTTtagtACAAAATCAAAGTTGAAGTATCACAAGATTACGTGCCAACAAGAAAAACCTCAGTGCGTCTGCTGCGGCATCGTGTTCGCGAATAAACTCACGCTCAAGTATCATctcaaagTGTTGCCAGTTAACAAGGATAAGCCAAAAGAAAATGTTACCATTAATTGCAAGGGATGCAACAAGGTGTTTTACTCAAAGAAAAGTTATCGCTCACACGtagTAATCCACGATGGTTTACAATACCATTGTCAGGTATGCAACAAGCCGTTCCAATGGAAAAGGAATTTGGCTCGACACATGCGGAACCACAGAGATAGagaCAATGGCTCGTTGCATGAGTGTAAGCAGTGCAGCAAGAGATTCTCGTCCAGGGACTGCTATAATAATCACATGCGGTTCAGTAAACGGCACGTCGCTGAGGACAAGCTCAGCCACGAATGCTCGTTCTGCGGCAAGAAGTTCGCGACGCGCTGGTGCCTGGTGGACCACGCGGACTGGGAGCACCTGGAGCGCGTCAAGTACCGCTGCGGCGTCTGCCACAAGGCATTTAAGACGGCAAAGATAATGGTCGCCCACATGAATAACATACACAACGGCGGGAACAAGAAGGAGCCAGACGGCAGCCATCTTTGCGATATTTGCGGGAAATCTTATAAGACTGAAAAGCGTCTAAAAGGCCACGTCTGGTCGATGCACACTAGGCGCTCAACTGAGAAGAGCTACAAATGCAATCAGTGTCCAGCGACCTTTATTTGGCAGACAAGTATATACAAGCATATGAAAATGATGCATGACCGAAGAGGCATCACTGGGCCGGCCAAGCAAACAAGACAGCAAACCAAGAAGGAGGAGCCATACGACAACCACGATCCAACCAACAGAATTCCATACTACCAGCACGGATTACCAACAAACTTACAGTCGGACATGCAAAATGTTGGTGTTATGGTGGAGGTGCCGGGTTCAGTTCCCGGTCCTATGGGATTATGA
- Protein Sequence
- MKEININIEGYNVNGICVGCLNYNRKMYYVDQVKDCFKLLAEIDVPDGLTIQVCWECLAAVRKVVGFQEQILKSYDILIQYSRKFTFLNSPKDLSQYAATRLSACHVSNSNMVLMTDDVVKEEELGEIDDLKLEPDNVDVEKTILEYNVDIKDEFVYNEKIQLPVPDLDDGIDVIKDGIGVNNDGIHINNDSIGINNDGIDVNNDVDDTGQMTSDDDVVLSKIKKKKGKRADKKIKLEKKKKFKNDQPFREIHLTEEEMWKLRKQDLADEAFVKLKYKCQDCILSFQSKKLMEQHFKSKHVKTSTKTAQCPTCRSFFVNNVHLARHTARHFRGFACVHCDHRSSCRQVAAAHAESHPLQPMLCSSCGESFSTKSKLKYHKITCQQEKPQCVCCGIVFANKLTLKYHLKVLPVNKDKPKENVTINCKGCNKVFYSKKSYRSHVVIHDGLQYHCQVCNKPFQWKRNLARHMRNHRDRDNGSLHECKQCSKRFSSRDCYNNHMRFSKRHVAEDKLSHECSFCGKKFATRWCLVDHADWEHLERVKYRCGVCHKAFKTAKIMVAHMNNIHNGGNKKEPDGSHLCDICGKSYKTEKRLKGHVWSMHTRRSTEKSYKCNQCPATFIWQTSIYKHMKMMHDRRGITGPAKQTRQQTKKEEPYDNHDPTNRIPYYQHGLPTNLQSDMQNVGVMVEVPGSVPGPMGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -