Eaur021747.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637668.1:313079-327860[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00013 0.0093 16.9 0.5 1 23 198 220 198 220 0.95 2 11 4.3 3e+02 2.7 1.8 1 21 227 247 227 251 0.73 3 11 0.67 47 5.2 1.6 1 14 253 266 253 275 0.79 4 11 0.017 1.2 10.2 1.2 2 23 281 303 280 303 0.97 5 11 0.00056 0.039 14.9 4.3 2 23 308 329 307 329 0.97 6 11 0.0041 0.28 12.2 0.3 2 23 337 358 336 358 0.97 7 11 0.021 1.5 9.9 0.1 3 22 368 387 367 391 0.92 8 11 8.4e-06 0.00059 20.6 1.4 1 23 399 422 399 422 0.93 9 11 0.0019 0.13 13.3 1.6 1 23 428 451 428 451 0.94 10 11 0.00044 0.031 15.2 1.2 3 23 461 481 460 481 0.97 11 11 0.0018 0.12 13.3 0.3 1 23 487 510 487 510 0.95
Sequence Information
- Coding Sequence
- ATGTTGAACAATGTCTGTGCCACTTGCCTGAGCAGCGAGCGCCGTTTGTACTCACTTAGCCTAATGATGGAATTGGCTGATATTTGCAATGGAATTAAACTATCGCAAGAAGACAGCATCTGTTGGGAGTGCAAGGCGATTCTCTGCAAGTTCTCAATGTTCAGAGAGAGGGTGCTTCGTGCAAAGACAACGCTTGGTATTTGGATGCAGATTCCTCCACCTGCCCAGACATCGCTCAATCAGAGTTTATCAACTCTTTCCTTCTCTGGTCTAATActgATCCCTGAGGAGACAACCAGGCAgattaaagaggaagttttaagTGATGGTAATGGCGTCCAAACGGTTAAGAAAGACTTTGACTCTGGCATTGAAAGTGTTAAACTGGACGGCGAGCAGCTCATCGATGTGGAGataaaaGAAGAGCAAGAAACAAACGAAGACGACCTTAACTCTCCGGAGGATTTCGGAGATGCGCACACAGACGAACAGATGACCGACGAAGCATTCTCAGTGAATGTGATGAGCGAGACAGAAATGCTCAACTACAGGGCGAAGGAAAGGGACGGAGCTAGgtTCAAAAACACATTGTATAAATGTGAAAAATGTGTAGTAACGTTTAAAAATGAATCAAGCTTGAAAAGTCACGCTGCGCTTCATTCAGAGAAAGAAGGCGAGTACAGTTGCCCGGTGTGCGCGCGCAGATTTCCCTGCGACAAGTCCGCGTCGCTTCATCTCAAATCGCACTATAGATGCTTCGAGTGCCACGAGTGCGGTTATAGAAGCGTGAGCCAGGCGAGAATGTCGGGGCATTGCGCGCGACACAAGCCCGACATGAAGAAGTGCACTTTATGTAAAGATACATTTGGATCGACGCAGTTACTGATGACTCACCTGAGAACTGCTCACTCTGATGACGTCACTTGTAAACAATGCAATAAAACATTCAGAAGCAAATGTATGGCGAGACGGCATGCTCGTATTCACTTGGAGGACGTGCCTTTGTTGGAGTGCGACGTGTGCCAGAAGCAGTTTCGAGGAGACTGGCGGCTCAGAGCTCACAAGCGAGTGCACGAGAATATGGCGACAGAGAACGCGTACTGTGCGGAATGCGACGCTCAGTTCAAGAACGTTTATCTGTACCGCGTTCACTTGAAAACTGCGGCACGGCACGTCGCGCCGCAAGACAGGAAATTCTCGTGTTCGGACTGCGGCAAGCGCTGCACGTCCAAATCCTTACTGAAGATACACGTGGAGCTCGTGCACCTGCGGCGCCGCGACCACGCCTGCGAGCTCTGCGGACagACGTTCAAAGCGCGCATCATGCTGTCCCGGCACAAGAGGGAGAAGCACTCGAACAGAGCGAGAAAGAGCATCCTGTGCGACATTTGCGGGAAAGCTTTTACTGTACGTAAATGCTTGATAGAGCATAAAAACTTACACAGCGGAGCGCGGCCTTTCGAGTGCAAGATTTGTTTAGCAACGTTCAGCTACTCGGCAGCCCTGTACAACCACAACCGATTAGTGCATCTGAAGATAGGGCGCAACCGGAAAACTTGA
- Protein Sequence
- MLNNVCATCLSSERRLYSLSLMMELADICNGIKLSQEDSICWECKAILCKFSMFRERVLRAKTTLGIWMQIPPPAQTSLNQSLSTLSFSGLILIPEETTRQIKEEVLSDGNGVQTVKKDFDSGIESVKLDGEQLIDVEIKEEQETNEDDLNSPEDFGDAHTDEQMTDEAFSVNVMSETEMLNYRAKERDGARFKNTLYKCEKCVVTFKNESSLKSHAALHSEKEGEYSCPVCARRFPCDKSASLHLKSHYRCFECHECGYRSVSQARMSGHCARHKPDMKKCTLCKDTFGSTQLLMTHLRTAHSDDVTCKQCNKTFRSKCMARRHARIHLEDVPLLECDVCQKQFRGDWRLRAHKRVHENMATENAYCAECDAQFKNVYLYRVHLKTAARHVAPQDRKFSCSDCGKRCTSKSLLKIHVELVHLRRRDHACELCGQTFKARIMLSRHKREKHSNRARKSILCDICGKAFTVRKCLIEHKNLHSGARPFECKICLATFSYSAALYNHNRLVHLKIGRNRKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -