Eaur021812.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- RTase
- Assembly
- GCA_951802225.1
- Location
- OX637668.1:976395-998100[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 8 5.6e+02 1.8 0.1 1 17 861 877 861 878 0.86 2 12 0.087 6.1 8.0 0.5 1 23 1054 1076 1054 1076 0.98 3 12 8.1e-05 0.0056 17.5 3.7 1 23 1083 1105 1083 1106 0.95 4 12 0.34 24 6.2 2.0 1 23 1110 1132 1110 1132 0.97 5 12 0.27 19 6.5 1.9 1 23 1137 1160 1137 1160 0.96 6 12 0.047 3.3 8.8 0.9 1 23 1164 1187 1164 1187 0.94 7 12 0.0012 0.084 13.9 0.2 2 21 1200 1219 1200 1224 0.93 8 12 2.8 1.9e+02 3.3 0.2 2 23 1272 1294 1271 1294 0.94 9 12 0.039 2.7 9.1 0.1 2 20 1310 1328 1309 1331 0.91 10 12 6.1e-05 0.0043 17.9 0.6 1 23 1337 1359 1337 1359 0.98 11 12 4.9e-06 0.00034 21.4 0.9 1 23 1366 1390 1366 1390 0.97 12 12 0.0015 0.11 13.5 1.0 1 23 1396 1419 1396 1419 0.92
Sequence Information
- Coding Sequence
- ATGCGGTGCTGCGTGGGCGGATGCACGACTGTTTCCAAAACCAAGGGGATAACATTTCAAatggCTGACTCAAGTTCCGAAGAAGATTCCCAAGATGGGTCCAGTGTGGCAGTCTGCAGAATATGCCTCGACCAGAACTCGAAACTTGTACCCCTAGCCCACAGCGGGCTCGCAGACGCCATCTTGAATCTTATTGGAACTAAGtccgtgactgtacatgaTTTTGTTGACTTTAATATCAATTACTTAGACCACAATGACAGATATTACAAACAACTTGAACATTTCATAACTTCGTTGAACCTGACCCAACTGATTGACAAACCGACACATTTTACTGAGCACAGCGAGACAACCATTGACTTGGTGTGTACTGATGCACGAGTTCTCAGCGCAGACGTACATCACATACCTGACTTAGGAAAACATGCTTTTATAAAAGTTGACGTTgacataaaaaagaaaaaaccacCGCCGACCTTTATAACCTACCGACCTATTAAAGACATAAACCTTGACGACTTTAATAATGACCTAAAATCGTTAGACTGGGACGCCATTTCATTACTGACCGACGTAAACGACATGCTGACAATGTTTAATGTATTATTAATTGGACTTTATGACAGACATGCACCCATGAAGACTATTGTCGTGAGGGAGTCCCCTAAGCCCTGGCTGACGGAGAACGTACGTTTAATGATGCGTCTCAGAGACAAGGCACATAAACGCTTTAAAGAGACTAGGCAAGAGACacataaaaactattacaaaGAACTAAAACACCTTGTCGTAGCCGCTATTCACAGCGAGAAACGTGCCTATTTCAAGGAAAATATAAATCACACCGATGGCGATTCCAAAAAACTGTGGCAAAACCTTAAACGCGCAGTTCTGCCGAGCAAGCGGGATGTGGAACTTCCCTCACACTTTACTGACGCTGACGCAATCAACGACTTCTTCTTAAAAATACCAGGACAGACTAACGTTACTATCTCCGATCTTTCTTACTTTGAGCACCACAGACATGACAAAGCAACGACCTTTTCACTTGACACTGTTGCACCGGATGCAATCTTAAAAATTGTATCCGGTATCAAGACAAATGCAAAGGGCGTTGACTTAATTGACATAGACATGATATTATTAACTCTGCCGACTACTCTTCCTGCTTTAACTGCGATCATTAACAAAAGCTTATTGACGCAAACCTTTCCGACTGAGTGGAATATTGCAAAGGTTACGCCACTTCCCAAAAAACCTAATCCTGTTCTTATATCCGAACTTCGTCCAATAAGTATTCTGCCTTGCATGTCGAAGATAATAGAAGGGGTTGTGTGTAATCAGCTTTCGAAATACCTGGAGAAACATGGCTTACTACCTGAGTTGCAATCTGGCTTCCGGAAAGGGCGTGGTACTGGCACTGCTCTACTCGATGTAGTGGACAACGTGCTCTCAGCGCTTGACGGAGGTCAGAGCACAATTCTGGTACTGCTAGATTTCTCCAGAGCTTTCGATTGCATTAGCATTCCCCTTCTCTTGTCTAAGATGTCGTATTATGGATTTGACAGTACTACAGTCAAATGGTTTGATAACTACCTGTCAGGCCGCTCGCAAGTAGTTGGGTTGCGTAAAAACAACGGAACAGCGCAGTTCTCTGCATGTAAAATGATTTCGAGAGGGGTTCCGCAGGGGTCAATTCTTGGTCCTCTCTTGTTTATATTGTATACCGCAGATATTATAAACACCATTAAGGAAAGTAAGTATCATTTGTATGCTGATGACGTGCAGCTTTACTTATCTGGCAAACCTAAGGATGCAGGTGCAGTGGCGCAATCCATAAGCAGAGACCTGGATGGAATTGCGTCGTGGTCTTCACGAAACTGTCTGGTGCTGAATCCCAGCAAATCGAAGTATATTGTGCTTGGCTCAAAACTCCAAATCCATAATACGGTGCAGGCCCTTTCTACCAATGATATAGCTATTATGGGTGAACCAGTAGAACGGGTGGTAGAGGCTAGGAACCTCGGGCTGCTGATTGATGGTGAGTTGCATTTTGAGAACCACATCACCAGCATTGTAGGTAACTGTTTCTACCGTCTCAAGATTCTTTACAGTATACGTGATTACCTTAGCATTGATTTGCGTGTCATGCTTTGTGAGTCGCTTATTCTGTCGAGATTAAACTACTGTGATGTTGTTTATGGTGGCTGTATACTTGGTCGGACCAAAAGGTTAATACAGCGTGTTCAAAACGCATGTGCACGTTTTTGTTACAAAGTTCCTCCTAGATCCCACATTACTCCGTACTTGAATGCTGCTAAGCTCCTTAACATGGAGGCTCGACGGAAACTTCATCTTGCTTCACTGCTGTTTGGTGTCATTCGATCGCAAATGCCCTCTTACCTGTATCGCAAGCTACAATGGTCCTCGAGACTTCGTCAGGTCCACAGGATAACGCTGAGAGTTCCTCAACACCGAACAATGGCCTTTCGAGGAAGTTTTAGGTACGCGGCGACCAAGTGCTGGAATAATATCCCTCCCCCAGTCCGTGAAGCCTCAAATGACAGACTGCCCGGCTTCGTCTGCGTCGAGTGCGGCGCGCGTCTTCGTAACTTCACTAGTCTGAGGTTAAAAGCGCTTCGCTCACAAAGATTGATGTTCCAGATTTTGGATAGAGGGGAATGTCTGACACTCCAAAACCTTAGCGAGATAGACCGGGTCAGAAACAAACTTACAACCAACCTGAAAACAACCGAACCAACTATACTAATGGAAGAGCTAAACCCTAAAGAAAAAATAGATAAGCCATTATTGAACATGCACGAGGTGGACCTAGATTTGGATGTGGCACTTGATGACATAAAGACTGAGACGGAAGATATATTTTGTGACGCTGTGAATTTTGCAGCTGATACTGATTCTTCGGATGATGTGCTTATTAAGgaccTAAAAAAGGCGAAAGTGAAAAGAAAAAAGCGCGAAAAGAAGCACACTGAAGCGATTGAAGTGACTGAACCGAAGATTGACAGGCGCAGGAGGCCGTTACTGAACGCGGACCTAACTGAGACACTTTTTACAATCACCGAACTGACGGTTGAAGAACAGTTGGCGGAAATAGTTAAGAGACAGGAGAGTTCGAATTTTAAGAATtctctttttaaatgtatggAGTGTTTCAAGGGATTTTTGGACGAGGAGGCGTTCAATTCGCATATGGTTCGCCATACTGATCGTTGCGGCGAGTACAAGTGCACTATATGTAAGACTAACTTTAAGACGCGCAACGCTCTCCGCAAGCACATCACGGCTCACCACTCGCAGCGGTTCAGCTGCAACTCGTGCGATTATGTAACTTCGCATCGGCAAACTGCGCGACTTCACGAGCGATGGCACAAAGGCACCAAGTACCAATGTCCGCATTGCCCCGACGAGTTCTTTAAATTCACAACCTACATGGGTCACATTCGTATAAAGCATCCCTCGGACTTCGTGTGCGCTCTGTGCGGTTACAGTTTCGTCAGCCACAAGGGGATTGAACTGCACAAGAAACTGAAGCACAGATTGGATAACGTCCCTATCCCAGAGGACGGTCCTAAGTGTGTGGAGTGTAATGTCACCTTTGTATCGCCTGAGGCTCTAAAGAGACATCTGCAGATATCAAGGCGACACAGCGACACTGATACCGGCGAAAAAGTATTCAACAAACCGCGAAAGCAACGTGAAGTGAAACAAACTAAGGACTCAGAGACAAAGACGGGAGAGGACCCGAAGAAATATCCTAGTCAAGTGAGGAAGGCTGAGGGACCTATACCGTGCGAACAGTGCGGTCTTCAGCTAGAGGATTCGCGAGCGTACCACGGGCACTTCCGGCGCGCGCACCCGGACAAGAACAGGACCAACTACCCCTCCATGAAGTCGCCCACGATGTGCGAGGTCTGCGGCAGGATATTCCAGAGTTACGCCCTCCTCAAGGACCACACGTGGGTGCACACGGGGGAGAAACCTTTCAAGTGCGAGCTCTGCGGGAAGACCTTCCGCATGAAGCAGCGGCTGGTGGCGCACGGCCGCGTGCACGCCGCCACTCGCGCCCGGTACCCGTGCCCGCGGCCTGGTTGCGGAAAGGTGTTCAGTACGCACAGTAATAGGCAGAGACAtatgtttATCCACACAGGGCTGAAGCCGTTCCCGTGCGAGCAGTGCGGCCGGCAGTTCAAGCACGCGAGCGAGAAGCGCGCGCACGTCACCTACGTGCACCTCAAGAAGCCCTGGCCGCGGCGCGCCCGGCGGCGGCCGGCGGCCGGGGAGCGCAGggaTCATAATAGCGACATGGACGCGCAACTGTGGCCGCCATGCCCACAAGAGAAGATTCCGGAACAACACGAGAAAACCGcctattatacttaa
- Protein Sequence
- MRCCVGGCTTVSKTKGITFQMADSSSEEDSQDGSSVAVCRICLDQNSKLVPLAHSGLADAILNLIGTKSVTVHDFVDFNINYLDHNDRYYKQLEHFITSLNLTQLIDKPTHFTEHSETTIDLVCTDARVLSADVHHIPDLGKHAFIKVDVDIKKKKPPPTFITYRPIKDINLDDFNNDLKSLDWDAISLLTDVNDMLTMFNVLLIGLYDRHAPMKTIVVRESPKPWLTENVRLMMRLRDKAHKRFKETRQETHKNYYKELKHLVVAAIHSEKRAYFKENINHTDGDSKKLWQNLKRAVLPSKRDVELPSHFTDADAINDFFLKIPGQTNVTISDLSYFEHHRHDKATTFSLDTVAPDAILKIVSGIKTNAKGVDLIDIDMILLTLPTTLPALTAIINKSLLTQTFPTEWNIAKVTPLPKKPNPVLISELRPISILPCMSKIIEGVVCNQLSKYLEKHGLLPELQSGFRKGRGTGTALLDVVDNVLSALDGGQSTILVLLDFSRAFDCISIPLLLSKMSYYGFDSTTVKWFDNYLSGRSQVVGLRKNNGTAQFSACKMISRGVPQGSILGPLLFILYTADIINTIKESKYHLYADDVQLYLSGKPKDAGAVAQSISRDLDGIASWSSRNCLVLNPSKSKYIVLGSKLQIHNTVQALSTNDIAIMGEPVERVVEARNLGLLIDGELHFENHITSIVGNCFYRLKILYSIRDYLSIDLRVMLCESLILSRLNYCDVVYGGCILGRTKRLIQRVQNACARFCYKVPPRSHITPYLNAAKLLNMEARRKLHLASLLFGVIRSQMPSYLYRKLQWSSRLRQVHRITLRVPQHRTMAFRGSFRYAATKCWNNIPPPVREASNDRLPGFVCVECGARLRNFTSLRLKALRSQRLMFQILDRGECLTLQNLSEIDRVRNKLTTNLKTTEPTILMEELNPKEKIDKPLLNMHEVDLDLDVALDDIKTETEDIFCDAVNFAADTDSSDDVLIKDLKKAKVKRKKREKKHTEAIEVTEPKIDRRRRPLLNADLTETLFTITELTVEEQLAEIVKRQESSNFKNSLFKCMECFKGFLDEEAFNSHMVRHTDRCGEYKCTICKTNFKTRNALRKHITAHHSQRFSCNSCDYVTSHRQTARLHERWHKGTKYQCPHCPDEFFKFTTYMGHIRIKHPSDFVCALCGYSFVSHKGIELHKKLKHRLDNVPIPEDGPKCVECNVTFVSPEALKRHLQISRRHSDTDTGEKVFNKPRKQREVKQTKDSETKTGEDPKKYPSQVRKAEGPIPCEQCGLQLEDSRAYHGHFRRAHPDKNRTNYPSMKSPTMCEVCGRIFQSYALLKDHTWVHTGEKPFKCELCGKTFRMKQRLVAHGRVHAATRARYPCPRPGCGKVFSTHSNRQRHMFIHTGLKPFPCEQCGRQFKHASEKRAHVTYVHLKKPWPRRARRRPAAGERRDHNSDMDAQLWPPCPQEKIPEQHEKTAYYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -