Eaur022251.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637669.1:655697-660726[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.02 1.4 10.0 2.2 2 23 7 29 6 29 0.92 2 27 0.0055 0.39 11.8 0.6 2 23 53 75 52 75 0.96 3 27 0.0063 0.44 11.6 0.4 1 23 97 119 97 119 0.97 4 27 0.11 7.4 7.7 1.9 3 17 125 139 124 144 0.84 5 27 0.32 22 6.2 0.4 2 21 151 170 150 171 0.89 6 27 3.7 2.6e+02 2.9 1.0 1 23 178 201 178 201 0.80 7 27 2.5 1.8e+02 3.4 0.7 1 8 234 241 234 242 0.91 8 27 0.0022 0.15 13.1 0.4 2 23 272 294 271 294 0.94 9 27 1.7 1.2e+02 3.9 0.7 2 22 317 337 316 339 0.83 10 27 0.0017 0.12 13.4 0.6 1 23 361 383 361 383 0.94 11 27 0.00091 0.063 14.2 1.5 3 20 389 406 388 408 0.92 12 27 7.3 5.1e+02 1.9 0.5 2 20 443 461 442 465 0.82 13 27 0.019 1.3 10.1 1.0 2 23 536 558 535 558 0.91 14 27 0.19 14 6.9 0.1 2 23 581 603 580 603 0.95 15 27 0.0035 0.24 12.4 2.3 1 23 625 647 625 647 0.93 16 27 0.0027 0.19 12.7 1.5 1 21 651 671 648 672 0.89 17 27 1.2 82 4.5 0.3 5 22 682 699 679 699 0.91 18 27 0.19 13 7.0 0.2 2 23 707 729 706 729 0.93 19 27 0.043 3 9.0 1.2 1 23 736 759 736 759 0.88 20 27 0.00029 0.02 15.8 0.3 1 20 763 782 763 785 0.95 21 27 2.9e-05 0.002 19.0 0.5 1 20 791 810 791 813 0.94 22 27 0.00083 0.058 14.4 2.8 2 23 820 841 819 842 0.95 23 27 0.041 2.9 9.0 0.2 2 23 863 885 863 885 0.85 24 27 4.5 3.2e+02 2.6 0.2 1 11 892 902 892 909 0.88 25 27 0.077 5.4 8.2 4.7 1 23 919 941 919 941 0.96 26 27 0.00015 0.011 16.7 1.8 1 20 947 966 947 969 0.94 27 27 0.26 18 6.5 3.7 2 23 976 997 975 998 0.94
Sequence Information
- Coding Sequence
- ATGGAGGGAAACAAGTTAGAATGTTGCTTTTGTGACAGCACGTTTGTCGATCCCTCCTTGTTTAGGAGACACTTTAGTGTAAAACACTATTTTGTCGATAAAACATATGCACGCTTTCGTTCGTCCGGACCACCTCGTGTTGACATAACTAATTTGAAGTGCAGACATTGCTTTGAACCATTCGATAACTTAAAAGAGCTCGCAGAGCATCTTAGTACTGCGCATGGATTAGAAATTGACCCTGAGTCAAGTTTTGGTGTGGTGCCGTTGAAGCTCACGAAAGATTTGTATAATTGCGTCTTTTGCAACGCAAAGTTTTCTAACCTTGGCGGCTTATCAAGACATAGCGCCACCCATCTCGGTAAAAACATCTGTCACAAGTGCGGGAAAGGATTCACTACAATAAATACACTGGAGTGTCATACCGAGAAATGCCTCACTGACGGTTCTAAATGTTGGCGATGCAAAAAAACGTTTGAATCGAGGCAGGCTAGATTGGAGCATGTCAGAGCGAACAAGGACTGCTTCAACTACACCTGCAGGATATGCCGTGAAAGATTCATCTGCCTCGAAGCTCAGCAGAAACACTTGGAAGAAGTCCACGGGCAAGCAAAGTTGTCCTATCCCTGCTCGTGCGGCCAGGTCTTTGAGAAGAGAATTACGagatatttacattttaacaGGGAGCACTCTGATAAATTTAAGTGTAAAATATGTGGAAGACCGCCGCAGTTGCAAGCCACCCTGGTAGCCAAAATTATACTAAAGCATTCGACTGCTTGTCCGTTCAAGATCGCGGAGGGAAATATTATTAAGTGCTGCTTTTGTGACGTCACGTTTGTCGATCCTGCCGAGTTAAGGTCCCACGTCACTGTGCAACACTATTATGTGGATAAAAGCTCTACTGTCACAGCACAAGCGACTACTCGTGTTGATATTACAGACTTAAAGTGCAGGAAATGTTTTGAAGCAtttgataatttaaaagaCCTCGCGTGTCATCTCGGTATAGCGCATGGTTTTCTTATAGACGCAGATTCCAATATGGGACTTGTGCCACTAAAGCTAATGAAAAATATGTTTGTCTGCGTTGTTTGCTCCAAGAAATTTTCAACCGTGTATGCATTATCGAGGCATTCGGGCAAGCATCttctaaataatatttgtcaCAAGTGCGGTAAAAGTTACGAGACCTTACATTCTTTGAAGACACATTCCCAAATCTGCCTCTCCGACAATCGCTACTGCCGTTGTTGCAAGACCATCTTCCCAACAAGGGAACTCAAAATTGAACATATAAGAACTAGTAAAGCCTGCTTTCCTTTGCATTGCACTTTATGCCAAGAGCGATTCATGTCCGACGAGGCTAAGCAGCAACATCTGGTGGATGTCCACGGCAGACCGAAGCGTTCGTATCCATGCTCTTGCGGCCTGGTCTTTGTTAAGAGAATTCAGAGATATTGGCATTTTAACGAGCAGCACTCTGATAAAAACAAGTGTGAGCTGTGCGgaAGAAAGCACAAGTCGCAAGCAAGCGTGGTAGCTAAAATAATACTGAAGCATTCGACAGCTTGCCCGGTCAGGTTTGCGGAGGAAAACGTTATAAAGTGTTTCTTTTGCAAGGAAACTTTCGTGGACCCAGTAGCATTTAGGCATCACGTGACTGAACAGCACGATTCCGCGGATAAGACTTCAGCTGTCTCTACTCATACTATTACCCGCGTAGATATAACCGACCTCAAGTGCAGGCTATGTTTGCAACAGTTTGATAATCTTATAGATCTCGCAGATCATCTTAGAGCGGCGCACGGATTTGATGTCGACTCGAAGTCGAATCTAGGATTAGTGCCTCTGAAACTGGTGAAAGATCACTTCTGCTGCACGATTTGCAATAAGAAATTCTCGAACCTCGTGGTCTTGGCTAGGCACTCTGGTAAACATTTTCCTTGCCACATCTGTCAAAACTGCGGAAAGAGTTACGAAACTATCGACTCTATGCGCAGGCACACTAAAATCTGTCTCAGTGACAATTCCTACTGCATTCGATGCAAAACTACATTTCCGTCGAAGGAGGCGAAGAATGAGCATATAAGGACGAGCAATGAATGCTTCGTTACCAGCTGCCCAATATGCAAAGAGAAGATTAGGTACTGGCCGCTCAAGCGCAAGCACATGGAGGAGGTGCACGGCCTACAGAAGGCGACGTTCCGTTGCTCGGAGTGCGGTTcgacatttaaaaataacatttcgAGATACATTCATTTTAATTTGGAGCATTCAGACAAATACAAGTGCGACATATGTGGAAAGAGGTTCGGCTTGGCGCAGTATCTAAAGGATCACATGCCTCAGCACACGGGAGAAACAGCGTACAAGTGTGACGTTTGTGAGAAGAGCTTTGCGACACAGAATGCTTTGAGGAAGCACAAGCCTGTACACGATGACAGTAAGAAGTCTCGCTGCACCATCTGTGATAGATTGTTTGTTCGGTTGTATAAGCTAAAAGAGCATGTAAAGAGACACCACCCGGACGTTTTTGAGACGCAATTCGCATTAAAACAGAATGgCAAAGCTTGTCTGCCCGCTCGCTGTCCTATATGCAAAGAGCGTTTCTCATCGTGGGAAGTGAAAGAGGACCATCTGGAAGAAAAACACGGAAGACCAAAGAGACAGTTCACTTGTGCCCAGTGCGGGGCTGTGTTCCAAAAGAGGTTACACCACTACTTGCATTTTACAGCTGAGCACACGGACAAGTTTAAATGTAGTTTTTGCGGACAGAGATTTTCTACTGTTGCCTCTTACGATCAACATTGCCGCAAGCACACTGGAGAGAAGCCGTACACGTGTGACGCGTGCGGTAAAAGTTTCAGCTCTAACAAATGTCTTAGGAATCACTTGCCGATTCATGATGACACATTGAAGTCGAAATGTCCGGTTTGTGATAAGCTGTTCTCACTGAGACACAGGATGAAGGGTCATGTGCTTAAACACCACCCAAAAGATTATAAAGATGCCTTCGATATTCAATGA
- Protein Sequence
- MEGNKLECCFCDSTFVDPSLFRRHFSVKHYFVDKTYARFRSSGPPRVDITNLKCRHCFEPFDNLKELAEHLSTAHGLEIDPESSFGVVPLKLTKDLYNCVFCNAKFSNLGGLSRHSATHLGKNICHKCGKGFTTINTLECHTEKCLTDGSKCWRCKKTFESRQARLEHVRANKDCFNYTCRICRERFICLEAQQKHLEEVHGQAKLSYPCSCGQVFEKRITRYLHFNREHSDKFKCKICGRPPQLQATLVAKIILKHSTACPFKIAEGNIIKCCFCDVTFVDPAELRSHVTVQHYYVDKSSTVTAQATTRVDITDLKCRKCFEAFDNLKDLACHLGIAHGFLIDADSNMGLVPLKLMKNMFVCVVCSKKFSTVYALSRHSGKHLLNNICHKCGKSYETLHSLKTHSQICLSDNRYCRCCKTIFPTRELKIEHIRTSKACFPLHCTLCQERFMSDEAKQQHLVDVHGRPKRSYPCSCGLVFVKRIQRYWHFNEQHSDKNKCELCGRKHKSQASVVAKIILKHSTACPVRFAEENVIKCFFCKETFVDPVAFRHHVTEQHDSADKTSAVSTHTITRVDITDLKCRLCLQQFDNLIDLADHLRAAHGFDVDSKSNLGLVPLKLVKDHFCCTICNKKFSNLVVLARHSGKHFPCHICQNCGKSYETIDSMRRHTKICLSDNSYCIRCKTTFPSKEAKNEHIRTSNECFVTSCPICKEKIRYWPLKRKHMEEVHGLQKATFRCSECGSTFKNNISRYIHFNLEHSDKYKCDICGKRFGLAQYLKDHMPQHTGETAYKCDVCEKSFATQNALRKHKPVHDDSKKSRCTICDRLFVRLYKLKEHVKRHHPDVFETQFALKQNGKACLPARCPICKERFSSWEVKEDHLEEKHGRPKRQFTCAQCGAVFQKRLHHYLHFTAEHTDKFKCSFCGQRFSTVASYDQHCRKHTGEKPYTCDACGKSFSSNKCLRNHLPIHDDTLKSKCPVCDKLFSLRHRMKGHVLKHHPKDYKDAFDIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -