Eaur013519.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637654.1:4448636-4462584[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00015 0.011 16.7 0.5 1 23 138 160 138 160 0.95 2 11 0.0003 0.021 15.8 0.6 1 23 166 188 166 188 0.96 3 11 0.00017 0.012 16.6 0.6 1 23 298 320 298 320 0.98 4 11 5.7 4e+02 2.3 0.2 2 23 327 349 326 349 0.88 5 11 0.0018 0.12 13.3 0.3 3 23 587 608 585 608 0.90 6 11 0.0004 0.028 15.4 0.1 1 23 632 654 632 654 0.95 7 11 3.8e-05 0.0026 18.6 0.2 1 23 679 701 679 701 0.98 8 11 0.00075 0.053 14.5 0.2 1 23 707 729 707 729 0.97 9 11 0.00043 0.03 15.3 0.3 1 23 735 757 735 758 0.95 10 11 0.25 17 6.6 0.0 1 23 771 793 771 793 0.95 11 11 0.0012 0.083 13.9 0.1 1 19 811 829 811 833 0.95
Sequence Information
- Coding Sequence
- ATGGATGCAGAAGGTTTTCCTCCTCTCCGCTGGGAGGATGATGACAGGaatgaCACATCAGGTGAGGTGGCTAATGAAGAGATCATCTATGATACTGAATCAACATCGTATGGACGTGTGGTAaaatcaGAGGGTATCACTGCTTTGATACAAGACACAGATCAAATGGCAGCAGAGAACCTGATGTTTCTCTCTCAAGATGTGGTCAGTTTCACTGACAATGTGGAGCTGGCTGATAATGTGGAGTGCGTTACCGAGGAGGTCATCACTGATGACTGGGTGGTGCCTGATGGTCAGGAAAGagtggAAGTCTCTATGGATATATCTCAGGCGCTGCAAGATTTGAAGGaagaatataatattgatatacCTGTCCCTACTGACCAAGACGAGTACACAGCGATGCGTCCGTTCCCGTGCGACTTCTGCTCGCGGCGGTTCCGCAAGAAGGCGGCGCTGATGAACCACATGGTGGCGCACCAGAGCGACCGGCCGCACGCCTGCAACCTGTGCGGCGTGCGCTACATGCGCAAGGCTGACCTCATGAACCACCTCAAGGTGCACGCCTACGTGCCGCTGCCCGAGCCCGATGATGAGACCATAGACTTTGAAGAAAAGTTAGCAAATCATCATATCGTCAAACCACCCAGGAAGAAGAAGGGTCGAAGGAAAAAGAAGCAATCAGAAACTATGGAAGAGAATGGCACCTGGGAGAACATGACGTCGGCGCGCACGCAGATGTGgcagcggcgcgcgcgcacggCCGCCCCCGCCTCccccgcgcgcgcgccgcccacCCCGCCCTCGCCCTCCCCGCCGCCCGAGTCCCCGCCGCCCTCGTCCGCCCCGCCGTCCCCGCCcaccccgccgcccgccgatCCTTCCAGGCCGTTCGTCTGCCGGCATTGCGGGGTCGGCTTCGCTAGGGAGAAGGCGCTGCAGAGCCATTCTAGGATCCACGGCGGCGACTCGCCGCTGGAGTGCGGCGCGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCCCTCGCCGCGCAcacgcgccgccgccacccgcacctgccgccgccgcccgcccgcgcGCCCGCCCGCCCCGCCTCGCCGCCCGCCAACTCCGACACCGACGGTACGACTCTCTCTGTCACACTAGCACCCGcacctgccgccgccgcccgcccgcgcGCCCGCCCGCCCCGCCTCGCCGCCCGCCAACTCCGACACCGACGGTACGACTCTCTCTGTCACACTAGCACCCGcacctgccgccgccgcccgcccgcgcGCCCGCCCGCCCCGCCTCGCCGCCCGCCAACTCCGACACCGACGCACCCGcacctgccgccgccgcccgcccgcgcGCCCGCCCGCCCCGCCTCGCCGCCCGCCAACTCCGACACCGACGGTACGACTCTCTCTGTCACACTAGCACCCGcacctgccgccgccgcccgcccgcgcGCCCGCCCGCCCCGCCTCGCCGCCCGCCAACTCCGACACCGACGGTACGACTCTCTCTGTCACACTAGCACCCGcacctgccgccgccgcccgcccgcgcGCCCGCCCGCCCCGCCTCGCCGCCCGCCAACTCCGACACCGACGCACCCGcacctgccgccgccgcccgcccgcgcGCCCGCCCGCCCCGCCTCGCCGCCCGCCAACTCCGACACCGACGACAACGACGTAGACTACCAGCTGTcgccgtcgccgccgccggcgcggTTCgaggcggcgggcggcgcgcgcgggccCGAGCTGTTCTGCCAGCACTGCGGCGTCGCCTTCCAGCGGACCGACCTGCTGCGGAGACACGTCGCCGCCGCGCACAGCTACAAGCGTGTGGCGAGCCCGGATGGCGGGGGCCGCGGGGGCGAGGGGGGCGACGCGTGGGGCGAGCACGCGTGCGACACGTGCGGCGAGACGTTCTCGGACGCGCTGCAGCTGCTCGCGCACGCCGAGCGGCACGCCGAGCGCGCGCCGTCGCACAGaatgaaaaataaaaagaatcgAAATATACTGTCAAACAGTTCCCGGCAGTTCCCCTGCAGAGAATGCGGCAAGGTGTTCGGGTCGCGGTCGTCGCAGCAGATCCACGTGCGCATCCACACGGGCGAGCGGCCCTACGCGTGCCGCTTCTGCTGGAAGGCCTTCGCCGACGGCGGCACGCTGCGCAAGCACGAGCGGATACACACCGGCGAGAAGCCGTACGCGTGTGCGGTATGCCCGCGCGCGTTCAACCAGCGCGTCGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGCCGCGCCAACGGCGCGGCGGCGTACACGTGCGCGGTGTGCGGGCGCGCGGCCGGCTCCGGCGGCGAGCTCGTGCAGCACCTCATCCAGCACTGCGACGCCAACACCGCGCTCAAGCGGCAGCCCGCTGTGGCGGGCGGCGCGTTCCGGTGCGAGATGTGCGACCTGCGGTTCGCGCGGCGCGACGAGCTGCTGCTGCACGTGCCCGCGCACATCTGA
- Protein Sequence
- MDAEGFPPLRWEDDDRNDTSGEVANEEIIYDTESTSYGRVVKSEGITALIQDTDQMAAENLMFLSQDVVSFTDNVELADNVECVTEEVITDDWVVPDGQERVEVSMDISQALQDLKEEYNIDIPVPTDQDEYTAMRPFPCDFCSRRFRKKAALMNHMVAHQSDRPHACNLCGVRYMRKADLMNHLKVHAYVPLPEPDDETIDFEEKLANHHIVKPPRKKKGRRKKKQSETMEENGTWENMTSARTQMWQRRARTAAPASPARAPPTPPSPSPPPESPPPSSAPPSPPTPPPADPSRPFVCRHCGVGFAREKALQSHSRIHGGDSPLECGACGELCWSREALAAHTRRRHPHLPPPPARAPARPASPPANSDTDGTTLSVTLAPAPAAAARPRARPPRLAARQLRHRRYDSLCHTSTRTCRRRPPARPPAPPRRPPTPTPTHPHLPPPPARAPARPASPPANSDTDGTTLSVTLAPAPAAAARPRARPPRLAARQLRHRRYDSLCHTSTRTCRRRPPARPPAPPRRPPTPTPTHPHLPPPPARAPARPASPPANSDTDDNDVDYQLSPSPPPARFEAAGGARGPELFCQHCGVAFQRTDLLRRHVAAAHSYKRVASPDGGGRGGEGGDAWGEHACDTCGETFSDALQLLAHAERHAERAPSHRMKNKKNRNILSNSSRQFPCRECGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGAAAYTCAVCGRAAGSGGELVQHLIQHCDANTALKRQPAVAGGAFRCEMCDLRFARRDELLLHVPAHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -