Eaur022230.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637669.1:525494-536046[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.018 1.2 10.2 0.0 1 23 145 168 145 168 0.97 2 15 0.11 7.8 7.7 1.9 2 23 198 220 197 220 0.95 3 15 0.12 8.2 7.6 1.2 1 23 243 265 243 265 0.97 4 15 0.00078 0.054 14.4 1.1 1 23 269 291 269 291 0.98 5 15 0.0022 0.15 13.0 5.7 1 23 296 319 296 319 0.97 6 15 0.015 1.1 10.4 0.0 1 21 462 482 462 485 0.90 7 15 0.039 2.7 9.1 1.9 2 23 515 537 514 537 0.95 8 15 0.013 0.94 10.6 0.7 1 23 560 582 560 582 0.97 9 15 7.2e-06 0.0005 20.9 0.8 1 23 586 608 586 608 0.99 10 15 0.037 2.6 9.2 3.1 1 23 613 636 613 636 0.94 11 15 0.012 0.82 10.7 3.5 3 23 645 666 643 666 0.92 12 15 0.00042 0.029 15.3 1.0 1 23 672 695 672 695 0.98 13 15 8e-05 0.0056 17.6 0.3 2 23 702 723 701 723 0.96 14 15 1e-06 7.3e-05 23.5 1.5 1 23 729 751 729 751 0.98 15 15 0.00028 0.019 15.9 2.2 1 23 757 780 757 780 0.97
Sequence Information
- Coding Sequence
- ATGCAGGAGGAGTATTTAGACAGCGACAGTAGCGACAGCCGGGAGGACGAGAAGATCTTTGCGCTGGAGCAGCTGCAGAGCCAAAGCGGACAGCGGAGTAAGAGTGGTGACCACAAAGATGAGCAGGTTAAGATAAAACTTGAAGGCACCGTGGAAGAAAACGAGCAGCATCTGAATGTGGAAATACAGAGTAGCAACCAAAAGAAAccagtttctaaaaaaaaaaaaaacgACACAACCAGTGGTCGTAGTAACGCTAAAGCAGTCTGTAAACGAATCGACCAGAAAATACCTAATAGAGAGAAACGGGAGAAGGCACATAAACCTAGAGCAAAAATATACGGGAAAGAAAAGCAGAAGCATGCGTATAATCTCCAAACGGTTTTACAGTTTTCGAACGCGACTCttgtcaaaaataaaacttctcTGGGATACCAGTGTGGCTTCTGTGAACTTTCGTTTCTGGATCCGGCTGCCTTGCGCGCCCACGCCAACTCGACGCACCAAGAAGAAGATCTACTGCTAACTCCCCTAACTCCGACCATGAGAGATTGGACCGACGTCATGACCAAAGTCGACGTAACAGACTTAAAATGCAACCTGTGCGATGATGGATTCGAATATTTGCACCAACTAAAATTGcacttaacaaaaaaacacgGCAAAGTAATATACAGCGATATAAAAGACCACATAATACCGTTCAAATTGAAACAGGGCGAGGTGTACGACTGCGCTTTGTGCTCTTCAACTTACGAGACATTCAAAATGTTGGCGCAGCACATGCATGTGCATTTCGGCAATTACCAGTGCAGCGAATGCGAAAGTAGTTTCGCAACGAGGCGCTCTTTGAACGGGCACAAAACTACACACATGCAGGAAAGTCACAAGTGCACTAAGTGCGATAAAGTTTTCCGTACTAAAGTGAAGAGGCAGTACCACGAGCGAATGAGACATTTGCAAGCAAAGCCTTTTATAAAAGAAGAGGTAACCTTTCAAAATGCTGCGGAAGACTCAGACGATTGCACACTTGTTGACACAGATCTAAAGGAGGAGTATTTAGACTACGACAGTAGCAAGGACGACGACAAGAACTTAGCGCTACTGGCGCTCGAACAGTTGCAGAGCAAAGGCGGCATCACGGTCAAGCGGCGGAAGAGGAGGCGCGACCATAAACATGATCAggAAAACGACACACGTAGTAATGCTAAAGCAGTCTATATAAGAATCGACCAAAAACTACCTGGTACCGAGAGATGGGAGAAGCCACCTAAACTTAGAGCAAAAATATACAGAACGGAAAAGCAGAAGCATGCGTACAATCTCCAAACAGTATTACAGTTTTCGAACGCGActctttttaaaaacaaaacgttGCTAGGATACCAGTGTGGGTTCTGTGAACTAACGTTTCCGGATCCGGCCGTTTTGCGCGCGCACGCCGACGcaacacacaaacaaaaagATCGACTGCTAACTCCCTTAACTCAACCCACAAGAGATTGGACCGATACAATGACGAAAGTCGacgtaacagatttgaaatgcaacctgtgcgATGATGGATTCGAAAATTTGCACCAACTAAAATTGCACTTAACAAAGAAACACGGCAAAGTAATTTACAGCGATATAAAAGATCACATAATAcagttcaaattaaaacaaggcGACGTGTACGACTGCGCTTTGTGCTCTTCTACTTACGAGACCTTCAAAATGTTGACGCAACACATGAACGTACATTACAGCAATTACAAGTGCAGCGAATGCGAAACTAGTTTCGCTACGAAGCGCTCCTTGAGTGCGCACAGAAACGTACACGTTGAGGGAAGTTACAAGTGCACTAAGTGCGACAAAGTTTTCCTTAGTAAAGTGAAAAGGCAGTACCACGAGCGGATGAAACACTTGGGCGTGAGAAATATTAGCAACTGCCACCATTGCAACGAACCATTTCGAAGTTATTATCAAAGGAATCAACATATGGTACAAGTTCACAACTTAGAAGCTCAGTATAAGTGTAAAATATGCGACAAACCGTACCTTTTAAAGTCACTACTAATGaaccatattaaaaaaaatcatttaatgGAAAGAAATATACAGTGCGCTGAATGCGGTTATAAGTTCTTCAGTAATAAAGGTTTGAAGGCCCATATGGTAAAGCATACGGGGGAGAGAAATTATTCTTGTAGCGTCTGTAACAAGTCTTACGGTAGAAAGTATACTTTAAGGGAGCACATGAGAATTCATAACAATGATCGAAGGTTCAAGTGCGCTATATGTGAATTAACATTTGTACAGAAATGCAGTTTGAAAAGTCATTTGCTGTCGAATCATGGTATTAGCATGCCGGCTAGTGAGATAACGTCTAATGTACAGGATGTATAA
- Protein Sequence
- MQEEYLDSDSSDSREDEKIFALEQLQSQSGQRSKSGDHKDEQVKIKLEGTVEENEQHLNVEIQSSNQKKPVSKKKKNDTTSGRSNAKAVCKRIDQKIPNREKREKAHKPRAKIYGKEKQKHAYNLQTVLQFSNATLVKNKTSLGYQCGFCELSFLDPAALRAHANSTHQEEDLLLTPLTPTMRDWTDVMTKVDVTDLKCNLCDDGFEYLHQLKLHLTKKHGKVIYSDIKDHIIPFKLKQGEVYDCALCSSTYETFKMLAQHMHVHFGNYQCSECESSFATRRSLNGHKTTHMQESHKCTKCDKVFRTKVKRQYHERMRHLQAKPFIKEEVTFQNAAEDSDDCTLVDTDLKEEYLDYDSSKDDDKNLALLALEQLQSKGGITVKRRKRRRDHKHDQENDTRSNAKAVYIRIDQKLPGTERWEKPPKLRAKIYRTEKQKHAYNLQTVLQFSNATLFKNKTLLGYQCGFCELTFPDPAVLRAHADATHKQKDRLLTPLTQPTRDWTDTMTKVDVTDLKCNLCDDGFENLHQLKLHLTKKHGKVIYSDIKDHIIQFKLKQGDVYDCALCSSTYETFKMLTQHMNVHYSNYKCSECETSFATKRSLSAHRNVHVEGSYKCTKCDKVFLSKVKRQYHERMKHLGVRNISNCHHCNEPFRSYYQRNQHMVQVHNLEAQYKCKICDKPYLLKSLLMNHIKKNHLMERNIQCAECGYKFFSNKGLKAHMVKHTGERNYSCSVCNKSYGRKYTLREHMRIHNNDRRFKCAICELTFVQKCSLKSHLLSNHGISMPASEITSNVQDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -