Eaur021275.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637666.1:5392515-5397838[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00046 0.032 15.2 2.8 2 23 140 162 139 162 0.94 2 16 5.5e-05 0.0038 18.1 2.8 1 23 171 194 171 194 0.97 3 16 0.095 6.6 7.9 0.4 2 23 207 229 207 229 0.96 4 16 0.0047 0.33 12.0 7.3 1 23 238 261 238 261 0.97 5 16 7.1e-05 0.005 17.7 1.2 1 23 272 295 272 296 0.96 6 16 8e-05 0.0056 17.6 1.2 2 23 329 351 328 351 0.96 7 16 0.00045 0.031 15.2 0.5 2 23 361 383 360 383 0.96 8 16 0.33 23 6.2 0.2 3 20 389 406 387 408 0.93 9 16 0.00085 0.06 14.3 0.3 2 21 413 432 412 435 0.94 10 16 0.0014 0.099 13.6 0.4 3 23 445 466 444 466 0.97 11 16 0.00075 0.052 14.5 6.9 1 23 471 494 471 494 0.90 12 16 6.8e-06 0.00047 20.9 0.4 1 23 504 527 504 527 0.96 13 16 0.0018 0.13 13.3 3.1 1 23 547 570 547 571 0.96 14 16 0.00011 0.0077 17.1 1.6 2 23 605 626 604 626 0.97 15 16 0.017 1.2 10.2 0.3 1 23 692 714 692 714 0.96 16 16 0.54 38 5.5 2.5 1 23 720 743 720 743 0.97
Sequence Information
- Coding Sequence
- ATGTCAGAGCAAAATGCCAAGAACCGCATTGATCCAACCCTACTGCTCCCTGATGAGCCAATGTGCTACGAAattaagaagaagaagaaaaagaagaagaagaagaaagattTAGAAGACCCTCTGGGAGACCTATTGGAGAAGCCTCCGGAAGCACCTGTAAaaatagAGTATGACTACGATTCAGTACTTGACCCCGAGGTGACGATCAAGGAGGAAAACATTGAGGTGGATCTAGACTTCAATGATTTCGGAGATGATCCCTATCAAGGAGAAGTAATAGATAATGAAATGCAACCTGAAGACGAAGTACCGGTAGATATAAATGAAGAGATTAAGAAAGAAGCCTGCCTCCTTACCtttgaaaatattctaaaGGAAGTTAAAAAATCACATAAAAAGTCAAAATACCAAAAAATGTGCAATATATGCCATTTGGTATTCAAAACAACAAGTACGCTAAGAATACATCAGGTGAAGAAGCATAAAATGTACCGACcaagttttgtttttgcttGTGACCATTGCGGGATGGCCTATGAACACAAAACAAGTCTTGAAACGCATATAAGACGGAAACACTCCAAAAATACTGTACCAGAAGACAACGAACAAAGAGTTTGTGAGGTATGCGCATTGGTCTTCAAAGGTATGACCCGTCTAAGAATGCATATGCAGAGGAAACATGGAACGTACAGCGATACATTCAAACACAAATGCCATGACTGCGGACTAACCTATGACAAATACCATAGCTTGTTAGTACACAGACGTAGAAAGCATGTTGTGGTCAAAGAGAAACGGGTTAGCTGGTACAGATGTCCTTTATGTCCTAAAATGTTTGCCAAAAGGGACGCTTACTCAAGACATGTAATAAGGACACATCACAGCGATAGAGAGGACAAGAAAATACCAAAAGAATTCCTGGACAGCCTTAACGAGTCAAATATGAAAATTGATTCAAATATGAGTTTAAATGAAATACCATGCAAGCATTGCCCGCTAGTGTTTTCAAGTGTTAtgtatttaaagttacatatGAGGAGAAAGCATAATGAATTTAAAGAGGACTTCCAACTGAAATGCGTGGTTTGCGACTTATCGTACGATAAAGTTGAAAGCCTAAAACGTCATATAAGAAGGAAGCATACAGGGTGCTCGATTTGTGAAATTTGCAAGATACAATTCCAAACAGAGGAGGATTTTGCTAATCATACTCATGAGAAACCTATTATAGAATGCTCTATATGTGGACTTATTTTCGCTTCTCAAGGTGGTTTGGGAAAACATATGCGTTGCACACACAAAATTGACAAACCAAAGACGGTATTCTGTCAAGTTTGCAAGGAAGGCTTCAATGAGAATAGGCAGCTGAAAGTCCATATAATGAGGGTACATTTAAATGTTAACTATCCATGCAAACATTGCAAGAAAGTATTTAAGACAAGACCGAGTTTGAGAAAGCATTGTATGCGATACCATGCGGTTGGTCTGGTGAAAAGTACAGATTACAAATGTGATGTTTGCCCCGAATCGTTCAAGAGTGAACCAGAGCTCTGTCGCCACATAAAAGCAGcgcataaaaataaagaaattcaAGTAAAAAGTGAAAGTGAAGTTAAAGTTGAAACAGAGTCGTATCAGTGCACTAAGTGTCCACAAACTTGTCCTACTTGGTTAGAGCTTAGGGTGCATTATGAGAAAAACCATCACAATCTACCTTTAATACAATGTGAAACATGCAGTGATTTTGTATCAGAAAAGGAGTTACCGAGACATATGAAGTTGAAGCATCCAGTGGAAACGCTACAAAAGTGTCCGTACTGTGATTTTGAAACTACCTCCAAATCGAGTCTGACTCAGCATACGCTGAGACACAAAAACGCAACAACGATAACATGCGACTATCAGGGATGCAAATATAAAAGTTTCTACCAGTTAGCTATGGATAAGCATAAGAAGAAACATGCTGAAATTGGTGAAAAACTTCAGTGTGCTAGTTGTCCGTTCCAAACAatgaataaatacattttgaagTACCATGAAGAGGAGCATAAAACTGGTGAGAAAAGGTACGCTTGTGATAAGTGTGATTATAGAACTATTCTTCCAGCAAATCTGGTGCAGCATAAGTACAAGCACGCCACAGAGAAAAGGTTTAAATGTGAATCTTGCCCATTTGCaactaaatataatacatcCTTAAGATTTCATGTAAGGAAAAAGCATTGCGATTTACCCTCTTAG
- Protein Sequence
- MSEQNAKNRIDPTLLLPDEPMCYEIKKKKKKKKKKKDLEDPLGDLLEKPPEAPVKIEYDYDSVLDPEVTIKEENIEVDLDFNDFGDDPYQGEVIDNEMQPEDEVPVDINEEIKKEACLLTFENILKEVKKSHKKSKYQKMCNICHLVFKTTSTLRIHQVKKHKMYRPSFVFACDHCGMAYEHKTSLETHIRRKHSKNTVPEDNEQRVCEVCALVFKGMTRLRMHMQRKHGTYSDTFKHKCHDCGLTYDKYHSLLVHRRRKHVVVKEKRVSWYRCPLCPKMFAKRDAYSRHVIRTHHSDREDKKIPKEFLDSLNESNMKIDSNMSLNEIPCKHCPLVFSSVMYLKLHMRRKHNEFKEDFQLKCVVCDLSYDKVESLKRHIRRKHTGCSICEICKIQFQTEEDFANHTHEKPIIECSICGLIFASQGGLGKHMRCTHKIDKPKTVFCQVCKEGFNENRQLKVHIMRVHLNVNYPCKHCKKVFKTRPSLRKHCMRYHAVGLVKSTDYKCDVCPESFKSEPELCRHIKAAHKNKEIQVKSESEVKVETESYQCTKCPQTCPTWLELRVHYEKNHHNLPLIQCETCSDFVSEKELPRHMKLKHPVETLQKCPYCDFETTSKSSLTQHTLRHKNATTITCDYQGCKYKSFYQLAMDKHKKKHAEIGEKLQCASCPFQTMNKYILKYHEEEHKTGEKRYACDKCDYRTILPANLVQHKYKHATEKRFKCESCPFATKYNTSLRFHVRKKHCDLPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -