Eaur022250.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637669.1:651564-655301[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.081 5.7 8.1 0.1 3 23 30 51 30 51 0.92 2 27 0.00015 0.01 16.7 1.7 2 23 70 92 69 92 0.96 3 27 0.0027 0.19 12.8 0.1 1 23 114 136 114 136 0.95 4 27 0.32 22 6.2 1.2 2 19 142 159 141 162 0.93 5 27 4.9 3.4e+02 2.5 0.2 1 21 169 189 169 190 0.83 6 27 1.1 79 4.5 0.1 2 21 198 217 197 220 0.84 7 27 0.082 5.7 8.1 0.2 1 21 227 247 227 250 0.88 8 27 0.0017 0.12 13.4 6.2 1 23 254 276 254 276 0.97 9 27 0.084 5.9 8.0 0.3 3 23 313 334 313 334 0.92 10 27 0.17 12 7.1 0.2 2 23 353 375 352 375 0.96 11 27 0.15 10 7.3 0.2 1 21 397 417 397 419 0.90 12 27 0.86 60 4.9 0.1 2 20 425 443 424 445 0.91 13 27 0.19 14 6.9 0.4 1 22 452 473 452 473 0.92 14 27 2 1.4e+02 3.7 1.7 1 23 480 503 480 503 0.87 15 27 3.4 2.4e+02 3.0 0.4 1 14 510 523 510 533 0.79 16 27 0.0052 0.36 11.9 4.7 1 23 537 559 537 559 0.98 17 27 7.5e-07 5.2e-05 23.9 0.6 1 23 565 587 565 587 0.98 18 27 0.11 7.6 7.7 0.4 2 23 594 618 593 618 0.91 19 27 0.018 1.3 10.1 0.1 2 23 637 659 636 659 0.94 20 27 0.013 0.93 10.6 0.0 1 23 681 703 681 703 0.93 21 27 0.71 50 5.1 1.0 2 20 711 729 710 731 0.91 22 27 0.66 46 5.2 0.3 1 21 738 758 738 759 0.86 23 27 0.018 1.3 10.1 0.4 1 23 766 789 766 789 0.90 24 27 0.004 0.28 12.2 0.6 1 21 796 816 796 819 0.89 25 27 0.0012 0.081 13.9 5.0 1 23 823 845 823 845 0.98 26 27 2.2e-06 0.00015 22.5 0.1 1 23 851 873 851 873 0.98 27 27 0.0029 0.2 12.7 4.8 1 23 879 901 879 902 0.96
Sequence Information
- Coding Sequence
- ATGACAGGAGAGGATTGGAATCGGAATACTTTATTGAAGCATTCTACGGCTTATCCGTTTAGAGCGCTCTATCTCGGCACTATTGGTTGCTGGTTCTGTGCGAGCAGCTTTGAGGATCCAGACGCTTTTAGACGCCACATGGAGGCGAGCCATGCGGGCCTCGACACGTCATATCAGAGGGGCACTAGAGTAGATATCACAGAGTTGAAatgcaaacattgtttgcaaTCATTCTCGAATTTAGACGACTTAGCAAACCATCTGAATTCACAACATGATGCTAAAATTGACACTGCTTCTCCATTAGGTCTCGTGCCGCTGAAGCTaataaaaaatgattattCTTGCGAAATCTGTCCAATGAAGTTTTCAGGGCTTAGACAGTTGTCAGTCCACGTTGGAGTCCACTATAAAGAAAATCTCACTTGCCAACGTTGCCGCACTAGTTTCAAATCAGCGGCCAGTTATGAGATGCATTGTAAAAAATCCTTTtgcttgaaaatatttttatgcaaACAGTGCAACGGAACATTTCCAACGATAGAGGCTAGGAATTTACATAAACAGACAACAAAGTCATGCTTGCCTGTTCAATGTTCCATTTGCAAAGAGCGTTTTCTGTACTGGGAGTTGCGAGAGAAGCATTTAGTAGAAGTGCATGGGAAAGAGAAAAAAGTATTTCCCTGCGCGCAATGCGGAATCGTCTTCGACAAGAGGATGACATTGTACTTGCATTTTACCGCAATGCACACTGACAGGTTCGTGTGTCCACAATGCGGGAAGAGGTGTTCTACGAATAGAGATTTTAAAGAGCACTGTCGCACTCACACTGGCGGCCCAAGCGTCTCAATGACAGGAGAGGATTGGAATCGGAATACTTTATTGAAACACACTACGGCTTATCCGTTTAGAGCGCTTAATCTCGGCACTATTGGTTGCTGGTTCTGCTCAAACAGCTTTGAGGATCCAGACGCGTTTAGACGCCACACGGAGGCGAGCCATGCGGGCCTCGACACGTCATATCAGAGGGGCACAAGGGTAGACATCACAGAGTTAAAATGCAGAGAGTGTCTGCTATCATTCTTGAATTTGGACGAGTTAGCGAACCACCTCAATTCTCTACATGATGCTAAAATTGACACATCGTTTCCATTAGGGCTAGTGCCGCTGAAGCTTataaaaaacgaatacttttgtGAACTCTGTTCAATGAGGTTTTCAGGGCTCAGACAGTTGTCTGAACATGCCGGTGCTCACTACAAAGACAACGTTACTTGCCAACGATGTCGTGCAATCTTTAAAACAGAAGCTAGTCTCGCATACCATTCTAAGAACACATACTGTACTAAAAACTTTGCATGCCAACTTTGCAAAAGAAATTTCCCAACCCTGGAAGCTAGGAATCAGCATAAACAAACTACCAAATCCTGTTTACCCTTTCACTGCTCCATTTGCGAGGAGCGTTTCGAATGCTGGGAGTTGAGAGAAAAACATCAAGCAGAAGTACATGAGAAGGAGAAGAAAGTTTTCCCCTGCGCTCAGTGCGGAGCTGTCTTTGAGAAGAGCATGCAGCACTACTTACATTATACTCTAGAGCATACTGACAAGTACAAGTGCGCTGAATGCGGTCGTAAATTCTCTATGAAGAACTCTTATCTAACTCACTGTCGCACTCATACGGGCGAACTGCCGTTCACTTGCGAAACTTGTGGTAAGAGTTTCATTAGTGCCAATGGCCTCCGGAAGCATACGCGGATTCACGACGACTCTAAAAAGCTCAAGTGTTTGTACTGTGATAGAAGGAGCAGCTTTGAGGATCCGGCCGAGTTCCGATCCCACATGGACACGAGCCATGCCGACTATGACGTGTCATCTTACAGGGGCACTAGAGTAGATATCACAGATCTAAAATGCAAAATTTGTACGCTTACGTTCCTGAATCTGGACGCGTTGGCCAACCACATAAACGCGCAGCATGATGCTCAAATAGACACAGCGTCTCCGTTAGGGCTTGTGCCATTGAGGTTAATCAAAAACAAATTCGATTGTGTCGTTTGCGGAATAAATTTCTCAGGGCTTAAACAGTTGACAGTGCACGCCGGTATTCATTACCAGTAcaagaaaaatttaacttgCGAACGCTGCCGTTCATGTTTTCGAACAGAGGCTGGTCTAGAACTTCATTCTAAGCAATCTGTTTGCATAAAGACCTTTTTATGCAAACAGTGTAATGCGTCTTTCCCGACCTTGCAGGCTAGGAATCTACATAAACAAACTACGAAATCATGCTTTCCTTTCAACTGCTATATTTGCAACGAGCGTTTCCGGTTCTGGGAGTTGCGTGAGAAGCATTTGGTTGAAGTTCACAATAAAGAGAAGAAGGTTTTCCGCTGCTCGCAATGTGGGATCGTGTTCGAAAAAAGGACTCAATTGTACCTCCATTTTACAGCAATTCACACTGACAGGTTCAAATGTAACGAATGCGGAAAGAGGTATTCCACTATACGGGATTTTAAAGAGCATTGTCGAACGCACACGGGCGAACTGCCGTTTACGTGCGACGAGTGTGGTAAAAGTTTCATAAGTGAGGGAGGCCTCATTGCGCACAAGCGGATCCACGACGACAGTAAAAAGTTCAAGTGTTCGCACTGCGATAGAATGTTTGTTGAAAGACGAAGGTTGACTGCACATGAGCTGAAACATCACCCGAGCTCGCTGGCAGATCAAAGAACagtttaa
- Protein Sequence
- MTGEDWNRNTLLKHSTAYPFRALYLGTIGCWFCASSFEDPDAFRRHMEASHAGLDTSYQRGTRVDITELKCKHCLQSFSNLDDLANHLNSQHDAKIDTASPLGLVPLKLIKNDYSCEICPMKFSGLRQLSVHVGVHYKENLTCQRCRTSFKSAASYEMHCKKSFCLKIFLCKQCNGTFPTIEARNLHKQTTKSCLPVQCSICKERFLYWELREKHLVEVHGKEKKVFPCAQCGIVFDKRMTLYLHFTAMHTDRFVCPQCGKRCSTNRDFKEHCRTHTGGPSVSMTGEDWNRNTLLKHTTAYPFRALNLGTIGCWFCSNSFEDPDAFRRHTEASHAGLDTSYQRGTRVDITELKCRECLLSFLNLDELANHLNSLHDAKIDTSFPLGLVPLKLIKNEYFCELCSMRFSGLRQLSEHAGAHYKDNVTCQRCRAIFKTEASLAYHSKNTYCTKNFACQLCKRNFPTLEARNQHKQTTKSCLPFHCSICEERFECWELREKHQAEVHEKEKKVFPCAQCGAVFEKSMQHYLHYTLEHTDKYKCAECGRKFSMKNSYLTHCRTHTGELPFTCETCGKSFISANGLRKHTRIHDDSKKLKCLYCDRRSSFEDPAEFRSHMDTSHADYDVSSYRGTRVDITDLKCKICTLTFLNLDALANHINAQHDAQIDTASPLGLVPLRLIKNKFDCVVCGINFSGLKQLTVHAGIHYQYKKNLTCERCRSCFRTEAGLELHSKQSVCIKTFLCKQCNASFPTLQARNLHKQTTKSCFPFNCYICNERFRFWELREKHLVEVHNKEKKVFRCSQCGIVFEKRTQLYLHFTAIHTDRFKCNECGKRYSTIRDFKEHCRTHTGELPFTCDECGKSFISEGGLIAHKRIHDDSKKFKCSHCDRMFVERRRLTAHELKHHPSSLADQRTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -