Eaur012043.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- -
- Assembly
- GCA_951802225.1
- Location
- OX637652.1:3440492-3464041[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.28 20 6.4 0.1 2 23 129 150 128 150 0.94 2 19 0.031 2.2 9.4 1.5 2 23 157 179 156 179 0.91 3 19 6.1e-06 0.00042 21.1 0.6 1 23 201 223 201 223 0.98 4 19 0.00024 0.017 16.1 0.7 2 23 230 252 229 252 0.96 5 19 9.4 6.5e+02 1.6 2.8 2 20 279 296 279 299 0.66 6 19 0.013 0.89 10.6 0.4 1 23 305 327 305 327 0.98 7 19 0.0013 0.089 13.8 0.2 1 23 333 355 333 355 0.96 8 19 9e-06 0.00063 20.5 1.1 1 23 361 383 361 383 0.98 9 19 0.0079 0.55 11.3 0.2 5 23 557 575 556 575 0.93 10 19 0.046 3.2 8.9 0.1 2 23 597 618 596 618 0.94 11 19 0.13 9.4 7.4 3.5 2 23 625 647 624 647 0.95 12 19 0.0035 0.25 12.4 0.9 3 23 656 676 654 676 0.96 13 19 3.4e-07 2.4e-05 25.0 0.4 1 23 681 703 681 703 0.97 14 19 0.088 6.2 8.0 4.8 1 23 709 732 709 732 0.97 15 19 0.24 17 6.6 1.8 1 20 736 755 736 757 0.90 16 19 0.00068 0.047 14.6 0.3 3 23 762 782 760 782 0.97 17 19 4.4e-05 0.0031 18.4 0.9 1 23 788 810 788 810 0.98 18 19 0.0054 0.37 11.8 5.2 1 23 816 838 816 838 0.98 19 19 7.6e-07 5.3e-05 23.9 0.9 1 23 844 866 844 866 0.99
Sequence Information
- Coding Sequence
- ATGTCGGGACGTAGCTGGAGCAGGCTGTTACCGTGCGTCTTCGGCAAAGTACCAGGGCAAGGAACAAGGAACCTGCGTCTTCTTGTCCTTGCCTTACCCTTTTCCTTTCCCCTGGCCAGGCTCAGATTTGGAGTTGGGACAGGAgaaaagcaGGAATGTATCTCAGAAATTAAGCTGGAGTGCAATTTGGAATGTGATCCGTGGTCTAATGTAGACTTAAGTTCAAATGAACATAATTTTGTTAATGAAGAACCTGTAACTGAAAAATATGTCAAAATAGAAGAGATACCCGTTGAGACCATTACAGCagGCCTCTGCCCGAGGGAGATAGCAGACAAACCAGCACTCCTAGAGCACATTGACCAGCACTTGAAAAGCAGCTCTCCCTGTGAAATATGCTCTGAACAATTTACTGAATGGCAGGAGAAGGCATCTCACAGATACGTGCACATAGAGGTGGAGCACATGGTTTGCCACCTCTGCGACAAGAGGTTCAAATCTGGTGGAACTCAAGAAAATCACTATTACAAGGCTCATTCGGAGAAGGGTCGCCGCGGACCTAAGAAACAGCGGCGTTATAGAAAGGACCTCGACAAACGATACGTTTGTGACGAATGTCAAAAAGCtttcaaATCGAAACAAAAGTTGACCACTCACTTGGCAGTACACAGGCCGCGCGAGCAACTGCCTTGTCCCGATTGTggaaaattattttctagCAATACGTCACTTAAgtttcaCAGAAAGACTCTCCACTCCACAGTGGGCGAGTATTGCTCGTTTTGCCAGAAGCGCGTGCCCTCGCTGGCGGAGCACCACTGCGCGCGCCGCGGCGTCTGCACTATTTGCGGGAAGAGAGTGGCCTCGCATTTTaTGCCACGGCACATGCTAACTCACACGTCCGAGCGGCCGTACAAGTGCTCGGAGTGCGGCAACACGTACCGCTGGCAGTCGTCGCTGGACGGACACGTCAACAAGCACCGCGGGCGCCGGCCGCACGCCTGCCCCTCCTGCCCCGCCGCCTTCTACACGCTCAATGTGCTGCTCCGGCACATACGCACACATACCGGTGAACGGCCCTACGTATGTGAGATATGTGGGAAAGGTTTCACAGGTTCTCACAACCGGAAGATGCACATGAAAGTCCATGGTCTGTCCATTGTCACCAAGAAAGGAATACAGGAGGCTGCAAAGGCAGTCAACTTCTTTGCTGACAGTTATACTGCACCGGCATTACCGAATTCTTTAGTCAGTAAATCGGATGGTCTTCCTCAGAGCATGTGCTCAACATGTAAAGATGCTGTATTCTTTTTTGCTACATTTAGAAGTAAATGTATTGAAACTGAAACTTCCCTGAAACAGATTCTTGCTCAACAGaaaataaaaaatgaaaagaTAACAGAACAACCACAAAAAGTTAAAGTAGAAGCAGAATTTTTTGAACCAGAAAATTATTTGGAAGTGGATTTTTTTGAGGATGCATGTGAATTCGATAACATCAACAACAAGGTCAAGATTGAACCTGAATGTGTATTAAATGATCTTAAAAGGAAAACAAGAACTAAAAAGAAAGAACCAAAGCCTAAGTTGAAGAaggaaaagaaaaaacaagagaaaatcataaaaagtgTTGCAAAGAAAACGATAAAAACAGATGCTGTTGTTAGTCTATGCCCGAAAAAGTTTAAACGGAAGGCGACCCTCTCAGACCACCTGGAGGGCCACTTACTGTCGGCGAAGcccgcgggcgcggcgggcccCGGGAGCCCCGGAGCCTCTGCGGGGCTTGTCTGCCTCACTTGTGGGGTCAAATTCAATGCTTGGGAGAGTCTGCTGTCTCACAGATACTACCATCTGACAGAAGACCAAATGATGTGCCATCTTTGTGAGAGAAGATTCTGCAATGCAGTCACACAGGAAAATCATTATTTGAGAGATCATTCAGGCAAGAGCCTGGGGCTGGCGTGCGCGTGGTGCGAGACGACGTGCGCGTCGCGGCGCAAGCTCAACAAGCACATGCTGGTGCACGCCGACCGCCAGTTCGTCTGCGCCGACTGCGGGAAGGCTTTCAAAAGCAAGTCTCATCTGGCGACCCATATAGGAATGCATGCCGGCATAAAGAAATATGTCTGCCACCCGTGCGACAAGAAATTTACATATCATAATGGCCTATTGCTCCACAATCGCAAGTACCACATGGTGGGCCACTACTGCAGGATTTGCACCAAAGTGTTCCAGGAGGAGAAGCTGCTGGAAGAACACGAGTGCCGCAAAACCGTTATCTGCAGTGTATGTGGCAAAGTACTACAGCATATGGCATTGTTAAAGGGCCACATGCGCACACACAACAACGACCGGCCGTTCAAGTGCGACATTTGCTCAGCTTCGTACAAGAGCAGGAGCGCCCTAACGGTTCACAAGAACCGGCACATCGGCAAGAGGCCCTACAACTGCAAACACTGCTCCGCGAGGTTCTACTCGCACTCGGTTCTCATCAAGCATACCAGGATACATACAGGTGAGAAGCCGTACGTGTGCAAGACGTGCGGCAAGGCGTTCACGGGCGGACACAACCTCAAGGTGCACATGCGCGTGCACGGCGAGGAGCTGGTCGTcagccgccgcgccgccgccgccgccgcgccgccgcgcaggAACCCAGCTCTAGTCTTAGTTTCTTag
- Protein Sequence
- MSGRSWSRLLPCVFGKVPGQGTRNLRLLVLALPFSFPLARLRFGVGTGEKQECISEIKLECNLECDPWSNVDLSSNEHNFVNEEPVTEKYVKIEEIPVETITAGLCPREIADKPALLEHIDQHLKSSSPCEICSEQFTEWQEKASHRYVHIEVEHMVCHLCDKRFKSGGTQENHYYKAHSEKGRRGPKKQRRYRKDLDKRYVCDECQKAFKSKQKLTTHLAVHRPREQLPCPDCGKLFSSNTSLKFHRKTLHSTVGEYCSFCQKRVPSLAEHHCARRGVCTICGKRVASHFMPRHMLTHTSERPYKCSECGNTYRWQSSLDGHVNKHRGRRPHACPSCPAAFYTLNVLLRHIRTHTGERPYVCEICGKGFTGSHNRKMHMKVHGLSIVTKKGIQEAAKAVNFFADSYTAPALPNSLVSKSDGLPQSMCSTCKDAVFFFATFRSKCIETETSLKQILAQQKIKNEKITEQPQKVKVEAEFFEPENYLEVDFFEDACEFDNINNKVKIEPECVLNDLKRKTRTKKKEPKPKLKKEKKKQEKIIKSVAKKTIKTDAVVSLCPKKFKRKATLSDHLEGHLLSAKPAGAAGPGSPGASAGLVCLTCGVKFNAWESLLSHRYYHLTEDQMMCHLCERRFCNAVTQENHYLRDHSGKSLGLACAWCETTCASRRKLNKHMLVHADRQFVCADCGKAFKSKSHLATHIGMHAGIKKYVCHPCDKKFTYHNGLLLHNRKYHMVGHYCRICTKVFQEEKLLEEHECRKTVICSVCGKVLQHMALLKGHMRTHNNDRPFKCDICSASYKSRSALTVHKNRHIGKRPYNCKHCSARFYSHSVLIKHTRIHTGEKPYVCKTCGKAFTGGHNLKVHMRVHGEELVVSRRAAAAAAPPRRNPALVLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -